miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TTGAATAAGACGAGTGGTCAA
species: Panicum virgatum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|198313930|gb|FL980829.1|FL980829 CCHY15741.b1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY15741 5', mRNA

TTGAATAAGACGAGTGGTCAA
||.||||||||||||||||||
AATTTATTCTGCTCACCAGTT

EST sequence (targeted fragment marked with yellow):
GTAACATGTTGGATCATCTTGGCTCTGAATTTCATGCTGTCTAGATCATTCAGGTCTGGAACTATAGTTATTTGCATATTTACATATCTTGGTTAATTTAGTATTTTCAAATCATGTGATTACAGAAGTTTGTACTCCGGCATAGATAAGTACCTTCATTTAATATGCAATATTTTTGCCAGTGAATATCTTCACTTTTTCGTTGTTCTGTATTGCACATTTATTATCTTCGATTTACTTATATTTGATTGTTTAAACGGTAGGGCACGCATCGCGCGCCTAATGTTCTAGTGCGATTAATGCATCAAGGGCTCCCAAGGAATCCAGCTACAATTGCCAACACAAGTCCATTTCCTAGCTGTTGCTCCTGCTGAGTAACTGATACTCCCTCCGTTCTAAATTATAGATCGTTTGACTTTTTCGTTTATAAGTTTGACCACTCGTCTTATTTAAAAATTTATTAGTCCATCAAACTTGGTGTACAAGTGCTTTTCAGTTTTGATAATTGTCCATCCCCTGCAAATTTATTAGACCCAAATTACGTAAACTGCACATTATGTAACTAAAGATTGTACGAACATTTTGTTCCCTTTCTATAAAAGCAGGCTGAACCCTTCAAAAAAAAAAAAGACCAAAAGATTTGCTGTTTTTGTTACTATTTTATTGATTTCTAAAGGGAAATTTCCAAATCAAGGGGTTCCG



gi|198376794|gb|GD043918.1|GD043918 CCHZ23140.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum

TTGAATAAGACGAGTGGTCAA
||.||||||||||||||||||
AATTTATTCTGCTCACCAGTT

EST sequence (targeted fragment marked with yellow):
ACATAAAAGCTGATCATACTGATCGGACATTTGGCACCAAACAACACTATGCCGAGGAAGCAGGAAGCCAAGAACAAACCCTTCTGCTAACGGGATGTCTGCTGCTGACTTGCCTGCCCTCGAGAGAGACCACCACCAGCCGGGCCAAACGCCGTATCTTGCTCAGCAAAAAAATCCACCCTCGCAAGCTGCTCCATCGAATTTAGGTACGCAGAATCCGCGGGGACCCAACACGTTGCAGCCGCCGTACCAACCAGCAGAAAAAAGAAACAAAAATGGAGGAAAAAAACATTCTGCTAATGGTATGTCGCGTGATGTGAAGTACTAGCCTAGCTTGTGGATCTACAAAAGCTATGCGGAATATATACTAGTTAAATGGTTTATTGCAAATACCTACTCCATCCATTCTAAATTATATGTTGTTTGACTTTTTGATACCAAGTTTGACCACTCGTCTTATTTAAAAAAATTATTAAAATATAGTCAAATTTTAAAGTATTATCGAAGAACTTGCATTGATAAATCATGCTACAGCAAAATAAATGATATTTTGCACAAATTTTTTAATAAGACGAGAGGTCAAAAAAGTCAAACAACCTATAATTTGGAACGGATGCAGCAGTTCTCAAGTATATATAGTCGCTACATATTTTTTTATCGCTTATGTAAAACATGGTGCATTTGGGTGTGTATATTCTCGGATAATAATGTACATTCGTATATATATGCTGATATATACTTCG



gi|198198930|gb|FL912580.1|FL912580 CCGO7738.g1 CCGO Panicum virgatum root (H) Panicum virgatum cDNA clone CCGO7738 3', mRNA seq

TTGAATAAGACGAGTGG-TCAA
||||||||||||||.|| ||||
AACTTATTCTGCTCGCCCAGTT

EST sequence (targeted fragment marked with yellow):
CTGAGGGGCTTCATCAACGGCAGCTTTCATCGCGCTCATCCTGGCGTTCCTGGGCTTTCCCGAGAGAGAGGCGCTAGGCTGGACGATCGATCCCCCGTTCCCAGTACAGACTTTTGTTCGTGTTCGTCCGGTGCAGAGTACTAGTAGCATACTTCCTCCGTCCCAAAAAAAAACCGTTGTTCTTTGACTCTTAGAAATTGCGTTTGACCCGCTCGTCTTATTCAAATATTTTATATATATTATAAGACAAATAAAATATTATTAAAATATCATTAGTGATGTAATAAGTCATAACAAAAGTGATAATATTTGTAAAAAAAAAGTTGAATTAGACGAGTAGTCAAACACAATTTTTAAGAGTCAAAGAACAACGATCTTTTTGGGACGGAGGGAGTACAGTACAACCATCACGCTGTCAGATCGATGCTAGGCGCCACCACTGCATGTGTGCGTGTGTGTTTTTACAGAGTTTGTATGATATGATGCATTATACTGTCGCATTGGGATTTGTGCGATATTGAATTGTACGTAAGAGATCAGAGTTGCATGAAT



gi|198105658|gb|FL832727.1|FL832727 CCGH17503.g1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat

TTGAATAAGACGAGTGGTCAA
||||||||||||||.||||||
AACTTATTCTGCTCGCCAGTT

EST sequence (targeted fragment marked with yellow):
ATATTGCTGGACGTTCCCCAGGATACAGCACTCATGACAGCAGAAATTTTTGGCCCCTTCCTTCCTATCGTGACGGTCGAGAAGATCGAAGACAGCATTGACGTGGTGAACTCCAAGACGAAGCCGCTTGCGGCCTACCTCTTCACCAAGAACAAGAAGCTGCAGCAGGCCTTTGTGGCGAACGTCCCCGCGGGAGGGATGCTCGTGAACGACGTCGCGCTGCATCTCACGAACCCGTACCTGCCCTTCGGCGGCGTGGGCGACAGCGGGACGGGCAGCTACCACGGCAAGTTCAGCTTCGACTGCTTCAGCCACAAGAAGGCGGTCCTGGTCCGCGGCTTCGGCGGCGAGGCGGCGGCGAGGTACCCGCCCTACACGATGGAGAAGCAGAAGATCCTGAGGGGCCTCATCAACGGCAGCTTCATCGCGCTCATCCTGGCGCTCCTGGGCTTCCCGAGGGAGAGGCGCTAGGCTGGACGATCGATCCCCCGTTCCAGTACAGACTTCTGTTCGTGTTCGTCCGGTGCAGATTACTAGTAGCATACTCCCTCCGTCCCAAAAAAACCGTTGTTCTTTGACTCTTAGAAACTGTGTTTGACCGCTCGTCTTATTCAAATATTTTATATATATTATAAGACAAATAAAATATTATTAAAATATCATTAGTGATGTAATAAGTCATAAC



gi|198200343|gb|FL913681.1|FL913681 CCGO8401.g1 CCGO Panicum virgatum root (H) Panicum virgatum cDNA clone CCGO8401 3', mRNA seq

TTGAATAAGACGAGTGGTCAA
||||||||.||||||||||||
AACTTATTTTGCTCACCAGTT

EST sequence (targeted fragment marked with yellow):
GTCCCGGAGCCGGACTTCACGTACGTGGGCAACCTGTCGTCCGGCGGCACGGCGCTGGTGACGGGGAGCTCGCCGCGGTTCGACGTGTTCGGGAACGACTTCGGGTGGGGGAAGCCGGTGGCCATCCGGAGCGGCGCCGGGAACAAGGTCGACGGCAAGGCGACGGTGTTCGAGGGGCCGGAGCGGGGAGGGAGCATGTCGCTGGAGGTGTGCATCGCGCCGGACGCGCTGGAGAGGCTCGTCGCCGACGAGGAGTTCATGGACGCGGTGAGCATGCCGGGGTTGTTGACCGCGCCGGGCAGCATTAATCACATCGTTGACAAGCTGCCGTGATGCACATGCCCATGCATGCTGCCCGCAGACAGCCTCGACGGTTGATGATGAAGAATCAACACTCGTGGTTCGTTTATTTTGGCTAGTTATTAATTATACTACTTCCATTTCAAATTGTAGTTCGTTTGACTTTTTTTGAAATTAAGTTTGACCACTCGTTTTATTCAAAAAATTATACAAATATTGCCAAATTTAAATCATTTTTGAAGATCTTGTATTGATAAACCCGCAACAAAAGAAGTGATATTTTACATAAATTTTTGAATAAGACGAGTGGTCAAATTTGGCATAAAAAAAGTTAAACAAACGGAGGAAGTATGTTGGTGTATTCTTGTTTCTTTAGTAGTTTTTGCCTTGTGAGTTGTCAAACATTATTTGGAAATTATGAAGTCATGTTTGAGG



gi|198226765|gb|FL941222.1|FL941222 CCGP11080.g1 CCGP Panicum virgatum root (L) Panicum virgatum cDNA clone CCGP11080 3', mRNA s

TTGAATAAGACGAGTGGTCAA
||||||||||||||.||||||
AACTTATTCTGCTCGCCAGTT

EST sequence (targeted fragment marked with yellow):
AAAGAAAGTAGCTGACAAGATTGTGTACGGAGGCCCAGACTGACGAGAAGAAACTAAAAATTGCTCCTACAATATTGCTGGACGTTCCCCAGGATACAGCACTCATGACAGCAGAAATTTTTGGCCCCTTCCTTCCTATCGTGACGGTCGAGAAGATCGAAGACAGCATTGACGTGGTGAACTCCAAGACGAAGCCGCTTGCGGCCTACCTCTTCACCAAGAACAAGAAGCTGCAGCAGGCCTTTGTGGCGAACGTCCCCGCGGGAGGGATGCTCGTGAACGACGTCGCGCTGCATCTCACGAACCCGTACCTGCCCTTCGGCGGCGTGGGCGACAGCGGGACGGGCAGCTACCACGGCAAGTTCAGCTTCGACTGCTTCAGCCACAAGAAGGCGGTCCTGGTCCGCGGCTTCGGCGGCGAGGCGGCGGCGAGGTACCCGCCCTACACGACGGAGAAGCAGAAGATCCTGAGGGGCCTCATCAACGGCAGCTTCATCGCGCTCATCCTGGCGCTCCTGGGCTTCCCGAGGGAGAGGCGCTAGGCTGGACGATCGACCCCCCGTTCCAGTACAGACTTCTGTTCGTGTTCGTCCGGTGCAGAGTACTAGTAGCATACTCCCTCCATCCCAAAAAACCCGTTGTTCTTTGACTCTTAGAAATTGCGTTTGACCGCTCGTCTTATTCAAATATTTTATATATATTATAAGACAAATAAAATATTATT



gi|59866476|gb|DN145619.1|DN145619 4835_B04_D07 Switchgrass stem cDNA library Panicum virgatum cDNA clone 4835_B04_D07 5', mRNA

TTGAATAAGACGAGTGGTCAA
||.||||||||||||||||||
AATTTATTCTGCTCACCAGTT

EST sequence (targeted fragment marked with yellow):
CACGCGTTCCGATTCAAGAACAAATCTATGAAACTGTTATAAGTAGTAATTAGTACTATCACGGATGTTTGTAACATGTTGGATCATCTTGGCTCTGAATTTCATGCTGTCTAGATCATTCAGGTCTGGAACTATAGTTATTTGCATATTTACATATCTTGGTTAATTTAGTATTTTCAAATCATGTGATTACAGAAGTTTGTACTCCGGCATAGATAAGTACCTTCATTTAATATGCAATATTTTTGCCAGTGAATATCTTCACTTTTTCGTTGTTTTGTATTGCACATTTATTATCTTCAATTTACTTATATTTGATTGTTTAAACGGTAGGGCGCGCATCGCGCGCCTAATGTTCTAGTGCGATTAATGCATCAAGGGCTCCCAAGGAATCCAGCTACAATTGCCAACACAAGTCCATTTCCTAGCTGTTGCTCCTGCTGAGTAACTGATACTCCCTCCGTTCTAAATTATAGATCGTTTGACTTTTTCGATTATAAGTTTGACCACTCGTCTTATTTAAAAATTTATTAGTCCATCAAACTTGGTGTACAAGTGCTTTT



gi|197951338|gb|FL695340.1|FL695340 CCGA4258.b1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA4258 5', m

TTGAATAAGACGAGTGGTCAA
|| |||||||||||||| |||
AAATTATTCTGCTCACCCGTT

EST sequence (targeted fragment marked with yellow):
ACGGAGGATAATGGAAGGGAACCATCGAATGGGAATGGTCGCTATTGATTCGGCAACGGGTACTGTAGCTAATTGTGGCTGTGAGGTGGAAATTTTGGAGTGTGAACCACTTCCAGATGGGCGCTTTTATTTAGAGGTAAATTTTGTATTATTACCAGATTTTAAGACAACATTACTACATTCTGTATTAGTTTTCAAACTGCTTTCTGTTGAGCAACTGCCCAAACTGCATCTCTGTGAGGCTGTGAGCTTACAGATCCCATGTTGTGTTGCTGCAGACTTCAAATATTATATTTCTTAGTATTGACCTGTCTACACCGATTGTCATATATGCTTTTAGATTCAACATTGTTTTGGAACTTAGAAGATTATAAGTACTATTTTCAAGGAATGTTTCCTTCGTTTCGCAATCCAAGTCCTTCATTCTTGTTACATTAGAAGAAATATCATGTACTCCCACTGTTCCAAATTATAGTTCGTTTGATTTTTTTGACTTCAAGTTTGCCCACTCGTCTTATTAAAAAATTTGATGCAAAATATCACTTCTTTTGTTGTGGCTTGCTTTATTAATAGAAGTTCTTCAAGATTGACTTAAATTTGACGACATTTGCACAAATTTTTTTGAATAAGACGAGTGGTCAAACTTGGGGTCAAAAAAGTCAAACGAACTATAATTTGGAATGGAGGAAGTACTGAGGAGAACAGAATATAAAGACAGTATCTTTTCTGTCAGCTGCAGAAGACTGACTTGCATAGTATCACTCTTGTAGTTTTCAAGTCTTGTCCACCTTTTTTTTTTTCTACCA



gi|198290303|gb|FL954643.1|FL954643 CCHY1462.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY1462 3', mRNA s

TTGAATAAGACGAGTGGTCAA
||.||||||||||||||| ||
AATTTATTCTGCTCACCAATT

EST sequence (targeted fragment marked with yellow):
GCCGGCGGCGGCGAGAGAGCGAGCAGATCGACGGTGCTCTCGTCCTCTCCATCGAGAAGCTCCAGGAGATCCAGGACGAGCTCGAGAAGGTAAATGAGGAAGCAAGTGACAAGGTTATGGAGGTGGAGCAGAAGTACATGGAAACTGTTGCGGATATCTACGGAATTGATTCCATAGGCGCTGATCACAAAGAGCAAAAAAATGACTGTAATCGGTGACATGGACCCTGTTGAGATCGCTAAGAAGTTGAAGAAGTTCGGGAAGATAGATATCGTCTCAGTTGGCCCGGCCAAGGATGACAAGGACGACAAGAAAGGGGGAAAGAAGTGATCAAGCGGCTTCGTCTGCGTCGCCTCCATCTCCATCTCCATGGATGCCCCTGATTCTCCCTTGATGAACATACATAGCAAGAACTTGAGGTTTTGCTTACTACTCCCTCAGTTTCAAATTATAATTTATTGACTTTTTCAACCCCAAGTTTAACCACTCGTCTTATTTAAAAATTTTGTGCAAATATAGTCAAAACTTAGTCATTATTAAAGAACTTTTATTAATAAAGCAAGCCACAACAAAATAAATGATATTTTGCACAAATTTTTAAATAAGATAGTGGTCAAATTTGAGGTTAAAAAATCAAACGAATTATAATTTGAAACGGAGGAAGCAATGAACAGTGATGTAAGGTATTGGTGTACACAGTCTCTCATCTGGGTATATGCAATGTACGATTAAAAATTAAGTGGGTTTATCCTAAT



gi|198377489|gb|GD047642.1|GD047642 CCHZ28362.b1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum

TTGAATAAGACGAGTGGTCAA
||.|||||.||.||||.|||
AATTTATTTTGTTCACTAGTA

EST sequence (targeted fragment marked with yellow):
CGGTGAGCGATCGCCAATTTGACATTGAGACGACGCGGTCGAGTCGATCGATGTGAGTTCCTTCCTGTGGATCGATCATCAGCGTGTGATGTTTGGGAGGTGCCGGTGGGAAGGGGCGGTGAAAAAGGCGTGGCTGCAAAGGGAGGGAGGAGAGGAATGATCACTTGCAAACAAAAACCAGTGCAACGACATGAATGCAATATACGTAGAACCATTTTATTTAATTCAGAGAGACAATATTTGTTTTTTCTATATGTACTGTTGATAGAATGTTAAAATTAGAGAAAATCGTTGGTTTTAAAATTATGATCACTTGTTTTATTTAATTCAGAAAGAAATTCATTCATAAACAAAATTTTAAATTATAAGAAAATAATTGGGTTTTAAAATTTTAAAA



gi|198221998|gb|FL937405.1|FL937405 CCGP8543.b1 CCGP Panicum virgatum root (L) Panicum virgatum cDNA clone CCGP8543 5', mRNA seq

TTGAATAAGACGAGTGGTCAA
||||||| |||| | ||.|||
AACTTATACTGCGCTCCGGTT

EST sequence (targeted fragment marked with yellow):
GTGCGAACCAAAGCAGACCCCAGCCGAAGTAGCGAAAGCGAAGTCGTCGCCGGAGCAGGAGGAGGAGGAAGCGCGCCGGAGCAAGATGTCGTGGCAGACGTACGTCGACGAGCACCTGATGTGCGAGATCGAAGGCCAGCATCTCACCTCCGCCGCCATCGTAGGCCACGACGGCAGCGTCTGGGCGCAGTCCCCGAACTTCCCCCAGTACAAGCCTGAAGAGATTGCTGCCATCATGAAGGACTTCGATGAGCCTGGTACTCTTGCACCAACTGGTCTTTTTCTTGGAGGCACAAAATACATGGTGATCCAAGGTGAACCTAATGTTGTCATCCGAGGAAAGAAGGGCACTGGAGGCATCACTGTCAAGAAGACGACCCTAGCCTTGATCATTGGTATCTATGATGAGCCAATGACTCCAGGGCAATGCAACATGATAGTGGAGAGGCTCGGCGACTACCTGATCGAGCAGGGTTTCTAAGTTTGTCATATGTTATTTTGGGTCATTTGGCACTTAAGTTTGCACCTCATTTGGTTCAGTTAATCTGTGGGCTTGCTCATCTACTTGGCGAAATCGCATTTATATTGCATGCAGTGAATAATTTAGCTTGGGTTTGTTTGTTTGGTAACAATGTTTGGAAAAGAGTCTGGAATTGGGGGTTTTATGTTTTGGCCTCGCGTCATATTCAAACTCAGCCTGCTGTTTTCACTGGAGTAATGGTACATTTTCCCCTGG



gi|198105579|gb|FL832726.1|FL832726 CCGH17503.b1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat

TTGAATAAGACGAGTGGTCAA
||||||||||||||.||||||
AACTTATTCTGCTCGCCAGTT

EST sequence (targeted fragment marked with yellow):
CATTTTCAGAGATTGACAGAATTGGTAGCAGAAAAGAAAGTAGCTGACAAGATTGTGTACGGAGGCCAGACTGACGAGAAGAAACTAAAAATTGCTCCTACAATATTGCTGGACGTTCCCCAGGATACAGCACTCATGACAGCAGAAATTTTTGGCCCCTTCCTTCCTATCGTGACGGTCGAGAAGATCGAAGACAGCATTGACGTGGTGAACTCCAAGACGAAGCCGCTTGCGGCCTACCTCTTCACCAAGAACAAGAAGCTGCAGCAGGCCTTTGTGGCGAACGTCCCCGCGGGAGGGATGCTCGTGAACGACGTCGCGCTGCATCTCACGAACCCGTACCTGCCCTTCGGCGGCGTGGGCGACAGCGGGACGGGCAGCTACCACGGCAAGTTCAGCTTCGACTGCTTCAGCCACAAGAAGGCGGTCCTGGTCCGCGGCTTCGGCGGCGAGGCGGCGGCGAGGTACCCGCCCTACACGATGGAGAAGCAGAAGATCCTGAGGGGCCTCATCAACGGCAGCTTCATCGCGCTCATCCTGGCGCTCCTGGGCTTCCCGAGGGAGAGGCGCTAGGCTGGACGATCGATCCCCCGTTCCAGTACAGACTTCTGTTCGTGTTCGTCCGGTGCAGATTACTAGTAGCATACTCCCTCCGTCCCAAAAAAACCGTTGTTCTTTGACTCTTAGAAACTGTGTTTGACCGCTCGTCTTATTCAATATTTTATATATATATAAGACAAATAAATATATTAAAATATCATTAGTGATGTAATAAGTCATAC



gi|198072507|gb|FL800546.1|FL800546 CCGG3108.b1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgatu

TTGAATAAGACGAGTGGTCAA
||||||||||.||..| |||
TACTTATTCTGTTCGTCTGTT

EST sequence (targeted fragment marked with yellow):
TCTCCATTTCCGTGTCCGCCTTTGGCTTTTTCTCCGGCGAGGACGGATCTCCACCTCGCCAAATGACCGGGCGCGATGGAGACTCTGCTCCCCTTCTCTGATTCTCCCGCTAGCGCTGGCTGCCCTTCCTCCTAGTGCACCGCGAAGGAGGCGGCAGACATACGGTTCCTGGGCCTCCTCATGGCGGCCTTCGTGGCGGGGTAGCTGCCGCGCGCGCGGGTGGCGGCGATCCGGCGGGCCTGCCTCTTCGTAGTTGCAGCTCGCCATGATCTCGAGCTCGCCGTGGAGGTCAATGCGGCAACGCATGCGATTCTGTGCCAATCACCGGCGCGTACATTCCGTCCCCCGCCGCCTGCATCTTGTCAAGCATCTCCACCGCCGGCCATGTTCAAATTCGCACTGGAGCTCTTCTTGCTCTGGCCGTTGCGGCGTCGGTGTCGACCTCGGCATCCGTCGATCTGGCCGCCGCTGCTGGGCTGGCCTTCCCTTCCCTTAGGCATAGCAGTTGTTCCGGAAGGACTCAAAGATAATCACTCCTGAGGCTCTAGCTACTGTTAAGTCTGCTATTGCAGATAGTGGGAACGACAAGAAGGTTGAACTAACAAAGAATTCTTTCAAAAAAGAAAAGTAAGAAAGAAGGCAGGCAGCTAGGTGAAGTTGGGAGGACCCAACCTTGACGGATAGTCTGAAAGTAAGTTCTCTAATTCTCTGTTGTCTGCTTGTCTTATTCATGATGTTTCTCAGATCCATAATTTGTGA



gi|254545180|gb|GR876654.1|GR876654 SW_H38_2_N09_035_1 cDNA library of switchgrass vascular tissue derived by LCM Panicum virgat

TTGAATAAGACGAGTGGTCAA
||||||||||||||...||
AACTTATTCTGCTCGTTAGGA

EST sequence (targeted fragment marked with yellow):
TTACGGCCGGGTAGAGGAGAATGGTCCTGTCTTCTTTACTGATAGAGACAAAATCAATCTGGCAGACCCAGTGGGTGTCCAGGAAAAGATGGCTTCGTTACGTTCCACATTTGGCATCGTCTGCGATATTTCTCATTCTATCAAGAATTCGTTAATTACAAAACAGGAGCTTTTCCATAATATTCTTGCCAACAACTTGGAGATAGAACAGATGGGAGAGATAGAAGAGCAGCTACATATTTTAGAGGATCTGGCTCCCAATTGGATATCTAAGAAGGTGATAAATGGAGAAGAAATACTTTACAGCTTTGAAACTATAGCAGATCAGAATTCAGTGTGGGAAAGGCTTGTAGAAGCTGTGTGAGGTGTGGAATAGCTGGGATTGGTTTAAAGCTAAAGAATCAGCCGCATAGTACTATGTATGTAACGCTAACGGAACCCACCAAACAGCCACATTTTCTCATCATGGAATCCTCAGGATTGCTCGTCTTATTCAATTTTAATTTTTTCTTCTGTTGCATTGCTAATGTGCTAATTACATGCTTAATACTGAAATTTCTACAAGACATAAATTTGCCTGGGTCTAATTCTGCTTAATATTTCACAGCACTGACATGCTCTGTGAGCTTTCCTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



gi|198339326|gb|GD006590.1|GD006590 CCHZ1155.b1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum

TTGAATAAGACGAGTGGTCAA
||.||||||||||||||| ||
AATTTATTCTGCTCACCAATT

EST sequence (targeted fragment marked with yellow):
GGCCTGAAACAAAACACGTACATACATAAAGCTGATCATAACTGATCGGACATTTGGCACCAACAACACTATGCCGAGGAAGCAGGAAGCCAAGAACAAACCTTCTGCTAACGGGATGTCTGCTGCTGACTTGCCTGCCCTCGGAGGACCACCACCAGCCGGCCAAACGCCGTATCTTGCTCAGCAAAAAAATCCACCCTCGCAAGCTGCTCCATCGAATTTAGGTACGCAGAATCCGCGGGGACCCAACACGTTGCAGCCGCCGTACCAACCAGCAGAAAAAAGAAACAAAAATGGAGGAAAAAAACATTCTGCTAATGGTATGTCGCGTGATGTGAAGTACTAGCCTAGCTTGTGGATCTACAAAAGCTATGCGGAATATATACTAGTTAGATGGTTTATTGCAAATACCTACTCCATCCATTCTAAATTATATGTTGTTTGACTTTTTGATACCAAGTTTAACCACTCGTCTTATTTAAAAAAATTATTAAAATATAGTCAAATTTTAAAATATTATCGAAGAACTTGCATTGATAAATCATGCTACAGCAAAATAAATGATATTTTGCACAAATTTTTTAATAAGACGAGAGGTCAAAAAAGTCAAACAACCTATAAATTTGGAACGGATGCAGCAGTTCTCAAGTATATATAGTCGCTACATATTTTTTTATCGCTTATGTAAAACATGGTGCATTTGGGTGTG