| mature miRNA: TTGACAGAAGAAAGAGAGCAC species: Prunus persica database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|84640577|gb|DW354187.1|DW354187 PU2_plate6_B15 PU2 Prunus persica cDNA clone PU2_plate6_B15 5' similar to PU2_plate6_B15 iden TTGACAGAAGAAAGAGAGCAC EST sequence (targeted fragment marked with yellow): TTCTTTTCCAACATGCTACAATGGTCAATGTCGAAAATCCTATTGTCATAGATCAACATTATTGCCCCGACAACAAAGGGTGCCCTGGTCAGGTAAGATATCATTCATGCTCTAAAAATCAGTTCCCAAAGTTTAATATTACAACTCAATTTTCTCTTCTTCACATTGATAAAAACGTTGGCATCACCAAATTATAACTGTCTAAGTTCGAAACATATCAAAAGCTTTCTTGGGCTTCCACCTAGAAGAGCCAATAATTTTAGGCCCAAAGCAAATCCAATAACTCCTTCCTCCATGGGCTTGCTCTCCTACTACTTACAAAGATCGAGCCTTGCTCATTGTAACCTTTGTAACTTATTAATGGAATTGAGGGTTGTAGCTCAAGTGGTTAACAACATTTACTCTGGTATTCGAAGTCCTAGATTTAATTCCCCTCTTTTCCAATACCATTTTTATCAAAATGACTTCATCGTAGCTTAGCCAAAAAAGCATTGAATCCCATTAAGCCGAATTCCCATGCTATAATACTTGTTCACCTTCTGTTTTATCAAAAGCTGGAAATCTGACTTCGTATTGTTTTTTTTTTCTTTTGTCAATTTTGTTTTTCAATAGGTTTCCGGAGTTTCAATTAGCGATGTGA | |||||||||
gi|89004578|gb|DN555499.1|DN555499 HPL-25-H04 Prunus persica L. leaf tissue, healthy Prunus persica cDNA, mRNA sequence TTGACAGAAGAAAGAGAGCAC EST sequence (targeted fragment marked with yellow): AGCAGGCCTCCCCATCCAGTGGGAAAACTAAAGTTAAAGCCGACAAGATTTCCTCCAAGACGGCAACGTTTTGACGCTGAGAGGATGAAAGTGCAGCAAAAGCAGCGGCTAAAACGCTCCCCGTGCCACTAGCAACAACGCACCGCTTGTTGCGCTCGCTTTCTTTTGTCAAGGCCTTGATCTTCCGCACCAAATCTCTGCAATCATCCGTCTTTTGACCATGGCTGGCTGCTGCTGTAGTAATTCTGGAGAGAATCTCGGAGACCTGAAGAGAAGTGATTGGGATGCGAGGGGTGGGAATGCGTTCAATGCCGAAAGACTTTTTCTGAACGCACCAATCTTGAATCATCTTGAGGATGGTGTGGTTGGGAATGGGCTCGA | |||||||||
gi|84628107|gb|DW341717.1|DW341717 PP_LEc0005P15f Peach shoot Prunus persica cDNA clone PP_LEc0005P15f, mRNA sequence TTGACAGAAGAAAGAGAGCAC EST sequence (targeted fragment marked with yellow): GCTGCAGGCAAGAACTTATGGTTATGTGAAAGTATTATAAATTGTATTTTTATTAGTATGTTTTTATTACGGTACTACCGACGTACCGGTCAATCCGAACCGAATATTAGGTTAACCGATCTAAAGTCTACATAAGTTTTTGGTTTGGTTAACGGAAGAGCCTTCTACCGTTCCGAACTGATCCGTGCCCAGGCCTATTATATATATGGTAGGGTATATATTTCGGAAAAAAGAAAAGACGCCAACTAGAAGTATCGTTTACACTCTGTGACAGACAATGTTTTAATTATCAACTAATCGTAATAAATAACAAATGTAACAAGTCGATTACACATGTCACATAATTTGATTCACTTAATGTAAATATATAGTTTTAAAATATTTATAAAGAATGGATTGTTGATATTGTATTGATAACGTTTGATGTCATTGTCAAATAACAAATATAACGACATGTTATCGATATATTATTGACAACATTAATACATGTTAATTCTATAATGACGAACATACAATATATTATGATATATTTTAAGGTTATATTTGGCTTATGGCCATGGCTGGAGATGGCCTAAGTCTTAGATGTGTTCTTTTTCTTTTGTTACTTCAGTTGTTTTTATTTTCCATTTTGTATATTATGAAATGTTTATTCTATAGGTTTTCGATTGATGGGAGTGGACTTTATGATTGTTCAACTTTATTTATGCTCTTTGGCTAAGTTTATTTTATTTTATATATTATAAATACTGTTATTCCTTTCTAGTACATTCCCATTATATATATATAATTTTTAACAAAAAATATTAAGCGGAGGGGGAAACCGAACGTAGGACCCCAGTTATACGGAAAAAAATTACTAACCCCTTGGAGTACAAGCTCCTCTTGCCAATTATTGTATTCTAGCTTAGCCAAGGAAAACAAGGTTCTTGGATTTATCATTTTTTGGAGGAATTGGTTCCTCTTTGGGGCGTTTTAGGGCTTGTTTATGAATTTTGGAGGGGGTTGGTTATTTTTTCCTGGCACCAAATTCAAATTTTCCCTTCCCCCGGGGGAAGAGTTTTTCCGGGTTCTAATCGGGGTTCCCAGGGGGGCAAATGAATCTTTAACCCCCAATTTCTTTTTTTTCCAAATTTGGGTTGGTTTTTTTTTCTTCCCCGGGCGGAAGGGAAATTTTGAAACTTGGGGGGGGGGCCCCGCGGCCCCCCATTCTCCCCCCTATAGGGGGAGCCGTAATATTCCCGCCGCCCCCCCCGGGGCCCCCGTTTTTTTATCAACCGCCCGCGGGAGGGGGGGGAAAAAAACCCCGCGGGGGTGATCCCACCCCATTTATTAATCCTGCCCCCCGTTTGGACACCCACACCACCCCCCC | |||||||||
gi|89488438|gb|DY644232.1|DY644232 PU3_plate37_E18 PU3 Prunus persica cDNA similar to expressed mRNA inferred from Contig1985 Pr TTGACAGAAGAA-AGAGAGCAC EST sequence (targeted fragment marked with yellow): CAGGGATGAATGCATGCCTTGTGGCATTGAGGGTGGATGGATGTGAATGTGAATGAGCTGAGAGATCATGTTGACAGAAGAAAGAGAGCACAACCCGCCATTGGCCAAAGAGATCTTCGCCACTGTTGGGAGTGTGCTCTCTCTTCTTCTGTCATCATCTCTTGCATTCCCACATCTGTGATGTTACCAGCACCGTCTGATCTGCATCTATCTAACACATATGTAAGGTCTTCTCATCAACATGATATGTGTTAATTTGAATGCAAACTAAAACTTTCTTTCTTCTTGTGGATCTGTAAAAATAATTCTATGCAGATGATTCTGTATAAGTTTTCCTTTAAAGGTAAACAGAAGAAAGAGGTAGCAGTTGTCACCAATTGAAGCAAGGATGTGTCAATTTTGTAGAAATTAATACTTTTCAAGATGCATGAGCAGATGTTGGTGATCTCTTATTTACTTTCTGTCAAGTAGAAAATTGCACCCTACAACTGTACATGTCATTTTACCGCAGAATAAGAGAGAGAGAGGAAAAAAAAACCCTAGCAGCACTCTGGTCCACTTTCTCTTTGTCATAACCGACTG | |||||||||