| mature miRNA: TTGACAGAAGAGAGAGAGCAC species: Populus tremuloides database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|27422339|gb|CA933859.1|CA933859 MTU3TS.P13.F02 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA sequence TTGACAGAAGAGAGAGAGCAC EST sequence (targeted fragment marked with yellow): AAATGGATCTCTCTCTCTTCTGTTAGTAGTCCTAGAATCACGCCCATATTGGAGAACAAATCAGTATTGAAACATATCTGCAGAGGCACTTATTGGCTGATTCAGATAGGACATGTTCAATGGGTTCAAGAAGCTGTCGGCTGCTGGCTCATTAAAGATGCTTGAATCTCCAAAGAGACCATTGCTTGAATTCAATAAACTAATGATCCCGTTCAAAAACTCCAATCTGTGGCTGAGCTCACTAACTTGAGCTCTCAAGATTGAGTTGTCAGCCTCCACGTTCAAATAATGTTGAGTGGTGATATTGATGCTAGTAAGAATCTGGTGATTCTCCTTTTTCAATTGAGCCACTTGAGCCACTAGATCATCCAAATGCTTCTGTTTTCGCATTCTAGACCTCCTCGCCGATTCACGATTCGATATCATTCTCTTCCTCTTCCTCTGATCCATCAATGCCTGCAAATTCTCTTCAGAACCCGAGTTCTGAATCAAAGATGACCCTGAAGATGTTCCACTAGACGAAGCCATGAGAGGCCCACAAAACAA | |||||||||