mature miRNA: TTGACCAGCTCGGCCATGAT species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|86522711|gb|CI162917.1|CI162917 CI162917 Oryza sativa (japonica cultivar-group) shoot and callus Oryza sativa Japonica Group TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): CAATATAAAANCCATGTCGATAGATAGATAGAATAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGATGGGGCA | |||||||||
gi|88431556|gb|CI579673.1|CI579673 CI579673 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GGCTCCCGCCTCCCGCGCCCGCGCATTGAACAACTCGTCGATCTGTCCGGCGAGGGTGAGTGCTTCTTGGGGTGTTCTTTTCGGCGACTTCTTGTTGGGGGGGGGGGGGGGGGGGGGTAAAATTCACTTGCGTTGCGGTGGCTGACCTTCTTTGCGTGTTCTTGTTTGGGTTTTGGGGTTGGGGGGTGAAGTGTTGGATCGTGAGTTTGGGGGTTTCTTGGCGGCGTGGTTTGAAATGGGCATCTTGTCCCTCATCACCGGGAAGGCCGGGGCGAGCGGGTTCGGTTCCGGGTCACGGCGGAGCAGGTCAACGCCGGCGTC | |||||||||
gi|87025444|gb|CI267810.1|CI267810 CI267810 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGATGGGGCA | |||||||||
gi|58672816|gb|CK061502.1|CK061502 60493rsicek_3296.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): CGAAGAAGAGAGCAAAGGTAAGGGAGAATCGACCGGCGCCCCAGTGAAGTACCTTCCAGCCAGATTAAGGCAGGAAGTCCCCGCCGGCATGCGGGACGTGAAGCCCTACCCAGAGGTTGCGGATCCTCCCATTGTATCTCGCTTCTCCATGCTGATTTCGCGGAAGGCGATCAGGGTAGTGGAATCCATCCATGTCGAGTGCGCCGACAAGAGCCTTGTCTTGTTCTACGCCGGCACCGGCTTCCCCGGCTTCTCCCACGGCTGCCACCTGATCTACGACGCCATCGACGGTTCTCTCACTGCAGTGCACACGTTCCCCTTTCCTGTGTCCGGAGTCGTCTGGGTCGGCACAGCCGCTGTCCTGCGCCATGCCGGCGGCGGCGGAGGAGGAGACGGTACTACCGCCTATGTCATCGCCGAGCTGCTCAGGCCGTTCATGGCTCCCTTCCCGAT | |||||||||
gi|89173461|gb|CI041354.1|CI041354 CI041354 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTTGAATAGAAATAACACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGATGGGGCA | |||||||||
gi|29616360|gb|CB621372.1|CB621372 OSIIEa07D10.r OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa07D10 3', mRNA sequence TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): ATCATGGACATGTTTGTAGGGGGCTCAGACACTACGACCACGATGATGGCATGGACCATGGCCGAGCTGATCAACCACCCACGCGCCATGCACAAAACGCAGAACGAGATCCGGGCAGTCGTGGGCAACACTAGTCATGTCACCAAGGACCACGTGGACAAGCTGCCCTACCTCAAGGCTGTTTTCAAGGAGACGCTCCGACTACACCCACCACTCCCGCTCCTCATCCCACGAGAGCCACCGGCGGATGCCCAGATCCTGGGTTACACCATACCGGCGCACACGCGGGTGGTGATCAACGCGTGGGCCATCGGCCGAGACCCGGCAGCATGGGGGCAGCAACCGGACAAGTTCTCACCGGAGAAATTCCTCAACGGCGCCATTGACTACAAGGGACAGGACTTCGAGCTGCTACCATTTGGCGCCGGTAGGAGGGGGTGCCCCGGGATCGTGTTCGGGGTGTCAGCCATGGAGATAGCACTCGCGAGCTTGCTCTACCATTTTGACTGGGAGGCGGCGGCAACTGATCACAGGAGGAGGGGCAGCCAAGCATGGGCGTTGCCAGTGGACATGAGTGAGGTCAATGGGATAGCTGTTCATCTCAAGTATGTTCTACATGTCGTCGCTAAACCACGTATGCCTTAACTTTAGAAAAGATGTTACCATCTGCAGTTCAACTGATAGGACCCTGGTTATGTATTGGTTGATTAACTTTTGAGGATATGGGATATCCTATCAATGTAGACCTCACTCGAGGAGATTGAATCGATAATGTGGAACACAACTACAACAAAAAAAAAGAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTTGTC | |||||||||
gi|86602327|gb|CI262796.1|CI262796 CI262796 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): CAATATAAAACCATGTCGATAGATAGATAGAATAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTTGGTCTGAAAAGGCTTAAATTACTAGCAAGAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGATGGGGCAC | |||||||||
gi|58608264|gb|CK036297.1|CK036297 40893rsiceg_11754.y1 Oryza sativa cv. 93-11 tillering whole plant cDNA library Oryza sativa c TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GGCCCTTTTTGGTCCTTCATTTACGATATGAAATGGATATGCTGGCTTTCTCTGGCTGTACTGAAGGCTGCACTCGTGAAGAGGCAGATGAGCTCACAAGAATGAGATATGCTTATCCATGGTGGAAAGAGAAAGTAATAAACTCCTATGCAAAAAGAAAAGATGGCCTTTGCCCTTTGACCCCAGAGGAGATTGCTCTTGTCCTCAGAGCCTTGGACATTGACAGAAGTATGCAGATATACATTGCAGCTGGAGAAATATATGGTGGAAAGCGTAGAATGGCTGCTCTTACTTCAGCGTATCCCAACGTGGTGAGAAAGGAGACACTTTTGCAACCTTCCGATCTCATGTTCTTCCAGAACCATTCGTCACAAATGGCAGCTCTGGATTACTTGGTATCACTGGAAAGTGATATATTTGTTCCAACATATGATGGTAATATGGCTAAAGTTGTTGAGGGACACCGCAGGTTCATGGGTTTTAAGAAAACAATCTTATTGGATCGAAAACTCATTGTTGAGCTGGTCGACCAGTATAATAGTGGTTCTATGCTGTGGGATGAATTCTCTTCACTAATCAAGTCTGTCCA | |||||||||
gi|86855094|gb|CI263161.1|CI263161 CI263161 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): CAATATAAAACCATGTCGATAGATAGATAGAATAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTCCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGATGGGGCAC | |||||||||
gi|89167310|gb|CI252841.1|CI252841 CI252841 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): CAATATAAAACCATGTCGATAGATAGATAGAATAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAATGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGATGGGGCACTGCGCCTTCCGGAACCTCTTCGCCGAGTACCTCCCCGCCGTGTGCGGCAG | |||||||||
gi|86596160|gb|CI266663.1|CI266663 CI266663 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTATGAGGAACGGGAATTGCGGGTTCAATATAAAACCATGTCGATAGATAGATAGAATAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGATGGGGCACTGCGCCTTCCGGAACCTCTTCGCCGAGTACCTCCCCGCCGTGTGCGGCAGGTACGTCGCGTGCTTCGTCGGGTT | |||||||||
gi|55411049|gb|CV723425.1|CV723425 root--03-I13.g1 Rice root lambda phage cDNA library (root) Oryza sativa Japonica Group cDNA c TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): ACGGCACGAGGCCTCGTGCCGAATTCGGCACGAGGAGAAGGCGCACGCCCTCCGCCGGCGGCAGACGGAGCTGTTCGTGCCGCTGATCAACGCGCGGCGGGAGTACAAGAAACGGCAGGGCGGCGCCAACGGCGAGCCGAAGAAGGAGACCACGTTCGAGCACTCGTACGTCGACACCCTCCTCGACATCAAGCTCCCCGACGACGGCAACCGCCCGCTCACCGACGACGAGATGGTCAACCTCTGCTCCGAGTTCCTCAACGCCGGCACCGACACGACGTCCACCGCGCTGCAGTGGATCATGGCCGAGCTGGTCAAGAACCCATCCATCCCAGTCAAAGCTCCACGACAAGATCATGGCCAAGACCGGCGGCGGCGGCGGCGGCGGCCAGCGCGAGGTCTCCGAGGAGGACATCCACGACAT | |||||||||
gi|66918968|gb|CX105816.1|CX105816 BI119J17 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): AATCCGGGTCGACCACGCGTCCGGGAGGACTGGCGGGAGCTGTACGGCTCGCACCTGCAGCTGGAGGTGGAGCCGCCGGTGCGCGACGCGCGCGACGAGGGCACCGCCGACGCGTGGATCGAGCGCAACCCGTCGCTGATCCGGCTCACCGGGAAGCACCCGCTGAACTGCGAGCCGCCGCTGGCGAGGCTCATGCACCACGGCTTCATCACCCCGGCGGCGCTGCACTACGTGCGCAACCACGGCGCCGTGCCGCGGGGTGACTGGTCGACGTGGACCGTCGATGTGACGGGGCTCGTCAAGCGGGCCATGCGGCTCACCATGGACGAGCTGGTCAACGGCTTCCCCGCCGTCGAGATCCCCGTCACGCTGGTCTGCGCGGGCAACCGCCGCAAGGAGCAGAACATGGTGCAGCAGACGGTGGGGTTCAACTGGGGCGCCGCTGGCGTGTCTACGTCGGTGTGGCGCGGCGCCCGCCTCCGCGACGTGCTCCGGCGGTGCGGCATCATGCCCAGCAAGGGCGGCGCGCTCAACGTGTGCTTCGAGGGCGCCGAGGACCTCCCCGGCGGCGGCGGCTCCAAGTACGGCACCAGCATC | |||||||||
gi|66916075|gb|CX102923.1|CX102923 RECm3928 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TCCGGGTCGACCACGCGTCGGGCAGGAAGTCCCGCCGGCATGCGGGACGTGAAGCCCTACCCAGAGGTTGCGGATCCTCCCATTGTATCTCGCTTCTCCATGCTGATTTCGCGGAAGGCGATCAGGGTAGTGGAATCCATCCATGTCGAGTGCGCCGACAAGAGCCTTGTCTTGTTCTACGCCGGCACCGGCTTCCCCGGCTTCTCCCACGGCTGCCACCTGATCTACGACGCCATCGACGGTTCTCTCACTGCAGTGCACACGTTCCCCTTTCCTGTGTCCGGAGTCGTCTGGGTCGGCACAGCCGCTGTCCTGCGCCATGCCGGCGGCGGCGGAGGAAGAGACGGTACTACCGCCTATGTCATCGCCGAGCTGCTCAGGCCGTTCCATGGCTCCCTTCCCGATGCCACGCTCGTGATGTGGTTGTCGAATTCCCCCGCGTCGACCTCCGGCAGCAATGGCCAATGGGTGAAGGAGGACGTTCGCCTTCCCGGCGAGGTGTGCACGGGCACCGACCCCTTCACCACCGACTTGGTGTTCTCGTTCGGTGAATCGTGCCTGTGCTGGGCCGATCTGTTCATGGGCATCCTGTTCTGCGACCTTGCGACGCTGCGTGCACCTCGGTTCCGTTTCATCCCATTGCCCAAGGCTTGCTCCTTCGACCCCGTCGGCAAGTATGGCCGGCCTCACATGCCCGAGTTCCGTTCCATGGGCCGCGTCAACGGTGTCATCAGGTTGATCGACATGGAGGGTTTTACCAACGAGTACCTGGCCGTGGATGAGGTGAAGCTGACCATCTGGACCCTGTCAGCCGACCTCAGCGAGTGGGAGAAAGGCCCGGTGTGTAC | |||||||||
gi|89174047|gb|CI041940.1|CI041940 CI041940 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTTGAGTGAAAAACTCAGAAGAGGTCAGTGAGAGCCTGTTTTCATTAAAGAAGAAGAGACTTGACCCAGGTTTTGAGGGGAAACCGGGCCCAAAAACCTTACATAAGCACGGTTTAAAGGGGAAACCGGGCAAAACCCACAAGGAGAACAAAGAAAAAACTTGCGACGGCACAACTGGAGGAGAACATAGCTCATCAAAGCCAAAAACTCCGACTTCCTATGAACAGACCACAGACAACGTAGAGCAGGGTCTTCAAGACGAAGCCTCCAAGGAGGAAACAGAGCGTCGAAACGCAAGCAACGTCCGTCCGAAAATCGGAACAGGGTTTTCACCCGAAGAAAACGGGTAGAGCAAAGAACGATGCCTTCAACAAGGAAAACGGCGCCCACAGGCGTCGCCATCGTTGCCTCTATCCTAAGAACGAGCAGGACAAAACGCCCCGGCTCGCTCTCCCTGCCAACTACGACACCCCTGGCTTCCACAACGCTACCAAGGAAAGCGGGAGAGGGTTATCGTTGCCGAGCTTGTCACCTACAAGCAGCTCCGACTCCCCCCAACACACCTACCCAAAGACACGC | |||||||||
gi|86592648|gb|CI268313.1|CI268313 CI268313 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GCGGGTTCAATATAAAACCATGTCGATAGATAGATAGAATAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTCCTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGAT | |||||||||
gi|58691650|gb|CK080337.1|CK080337 83240rsicen_28930.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indi TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): CTAGTGGATCCCCGGGCTGCAGTGTGCAGGCGGCGCCGACGGCGAGCCGAAGAAGGAGACTACGTTCGAGCACTCGTACGTCGACACCCTCCTCGACATCAAGCTCCCCGACGACGGCAACCGCCCGCTCACCGACGACGAGATGGTCAACCTCTGCTCCGAGTTCCTCAACGCCGGCACGGACACGACGTCCACCGCGCTGCAGTGGATCATGGCCGAGCTGGTCAAGAACCCATCCATCCAAGCAAAGCTCCACGACGAGATCAAATCCAAGACCGGCGGCGGCGGCGGCGGCCAGCGCGAGGTCTCCGAGGAGGACATTCACGACATGCCGTACCTGAAGGCGGTGGTGCTCGAGGGCCTCCGGAAGCACCCACCGGGGCACATGGTGCTCCCTCACAGGGCGGCGGAGGACATGGAGATCGGCGGGTACCTCATCCCCAAGGGCGCCACGGTGAACTTCATGGTGGCCGAGATGGGAAGGGACGAGAAAGAATGGGAGAAGCCAATGGAGTTCATGCCGGAGAGGTTCCTCGCCGGCGGCGACGGCGAGGGGGTCGACGTCACAGGCAGCAGGGAGATCCGGATGATG | |||||||||
gi|89180448|gb|CI044727.1|CI044727 CI044727 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TGAGGAAAAACCTCAGAAGAGGTCAGGAGAGCCTGTTTTCATTAAAGAAGAAGAGACTTGACCCAGGTTTTGAGGGGAAACCGGGCCCAAAAACCTTACATAAGCACGGTTTAAAGGGGAAACCGGGCAAAACCCACAAGGAGAACAAAGAAAAAACTTGCGACGGCACAACTGGAGGAGAACATAGCTCATCAAAGCCAAAAACTCCGACTTCCTATGAACAGACCACAGACAACGTAGAGCAGGGTCTTCAAGACGAAGCCTCCAAGGAGGAAACAGAGCGTCGAAACGCAAGCAACGTCCGTCCGAAAATCGGAACAGGGTTTTCACCCGAAGAAAACGGGTAGAGCAAAGAACGATGCCTTCAACAAGGAAAACGGCGCCCACAGGCGTCGCCATCGTTGCCTCTATCCTAAGAACGAGCAGGACAAAACGCCCCGGCTCGCTCTCCCTGCCAACTACGACACCCCTGGCTTCCACAACGCTACCAAGGAAAGCGGGAGAGGGTTATCGTTGCCGAGCTTGTCACCTACAAGCAGCTCCGACTCCCCCCAACAC | |||||||||
gi|88213394|gb|CI213243.1|CI213243 CI213243 Oryza sativa (japonica cultivar-group) same as Lib 33(supermix) Oryza sativa Japonic TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCCTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAG | |||||||||
gi|87020318|gb|CI261182.1|CI261182 CI261182 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GCGGGTTCAATATAAAACCATGTCGATAGATAGATAGAATAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGGCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGAT | |||||||||
gi|58686159|gb|CK074846.1|CK074846 72131rsicem_3538.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GCGGCGTCTAAACTAGTGGATCCCCGGGCTGAGGAATCTGGCACGAGGGTAGCAGCAAGGACCTGCTGGACATGCTCATGGACGCGGCGGAGGACGACACCGCGGAGGTCAAGCTCACCAGTGACAACATCAAGGCCTTCGTCCTCGACATCTTCACCGCCGGGTCGGACACGACGGCCACCACCGTGGAGTGGATGCTGGCGGAGCTGGTTAACCACCCGGAGTGCATGGCGAAGCTGCGGGGCGAGCTGGACGCGGTGGTGGGCAGGTCGCGTCTGGTGGGAGAGCAGGACG | |||||||||
gi|29636971|gb|CB641980.1|CB641980 OSJNEb01O19.f OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb01O19 5', mRNA sequence TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GGCGCCCGGTGCGTCGTGAAGGCGAACCACTTCCTCGCCGAGCTCCCCGACAAGGATCTCACCCAGTACGACGTGAAGATCACGCCGGAGGTGAGCTCCCGGAGCGTGAACCGGGCAATCATGTCGGAGCTGGTCCGCCTCTACCACGACTCCGATCTCGGAGGTCGCCTCCCGGCCTACGACGGCCGCAAGAACCTCTATACCGCCGGGACGCTCCCGTTCGACGCGCGCGAGTTCGTCGTCCGCCTCACCGACGACGACGACGGCACCGGCGTCCCGCCACGGGAGAGGGAGTACAGGGTCGCCATCAAGTTCGCCGCGCGCGCCGACCTCCACCACCTCCGGCAGTTCATCGCCGGGCGCCAGGCCGACGCGCCGCAGGAGGCTCTCCAGGTGCTCGACATCGTGCTCCGTGAGCTTGCCAACCGCAGGTATGTCTCGATAGGGCGGTCGTTCTACTCGCCGGACATAAGGAAGCCGCAGCGGCTCGGCGATGGCCTACAGTCATGGTGTGGGTTCTACCAGAGCATCCGGCCGACTCAGATGGGGTTGTCGCTTAACATTGATATGTCATCTACCGCGTTCATCGAGCCGCTACCAGTGATCGAATTCGTGGCCCAAATACTAGGGAAGGATGTCATATCGAGGCCATTGTCGGATGCAAACAGAATCAAGATCAAGAAAGCCTTGCGGGGCGTGAAAGTTGAAGTCACTCACCGGGGAAATGTGAGGCGGAAGTATCGCATTTCAGGGCTGACAACACAACCAACTCATGAACTGATTTTCCAATCGATGACCAATGAACATGAAATCTGTCGTAGAGTATTTCAAGGAAATGTATGGCTTCCCATTCAGCA | |||||||||
gi|88228088|gb|CI227568.1|CI227568 CI227568 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTTGACGGAAAACCTCAGAAGAGGTCAGGGAGAGCCTGTTTTCATTAAAGAAGAAGAGACTTGACCCAGGTTTTGAGGGGAAACCGGGCCCAAAAACCTTACATAAGCACGGTTTAAAGGGGAAACCGGGCAAAACCCACAAGGAGAACAAAGAAAAAACTTGCGACGGCACAACTGGAGGAGAACATAGCTCATCAAAGCCAAAAACTCCGACTTCCTATGAACAGACCACAGACAACGTAGAGCAGGGTCTTCAAGACGAAGCCTCCAAGGAGGAAACAGAGCGTCGAAACGCAAGCAACGTCCGTCCGAAAATCGGAACAGGGTTTTCACCCGAAGAAAACGGGTAGAGCAAAGAACGATGCCTTCAACAAGGAAAACGGCGCCCACAGGCGTCGCCATCGTTGCCTCTATCCTAAGAACGAGCAGGACAAAACGCCCCGGCTCGCTCTCCCTGCCAACTACGACACCCCTGGCTTCCACAACGCTACCAAGGAAAGCGGGAGAGGGTTATCGTTGCCGAGCTTGTCACCTACAAGCAGCTCCGAAT | |||||||||
gi|66916673|gb|CX103521.1|CX103521 RECm4529 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GGCGCGCGGACGTGGGGGGGGTAGGGGGGGGGCGGTGGTTGGGGGGTCGGGTGGAGGCGTGGCGCGGGGGGCGGGTGGGGGTGGGGCGGGGGTAGTGGATGTGTGTGTGTGGTCCATGCAGGTGGTGGATGNTGAGACAAACAGCCGCACATCTCTACAGAGAATGGTCTCCCGGCCGGGTTTGCAGGGTGCCACCGGTGTGTCCGGCCGCCTTTGTGTTGTGTGAGGAGCNGGGGTAAAAAGCCGCAAGTGGCCCCCCGCCCATTTTCCACATAGCGAGTCTCAAACTTAACCCAGTAGTCGAAGGCTTAATACTAGCAAAAGTATATCCGCCAACAGGCAGAGCTTACCACACTGAGATGGGAAAGTCGCTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCGTAACTGTTGGATGAGCCCTTGGCAGCATTAATAAGCTCGTCAGCAAGGCACTCAGCGATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCCCGAGGGCCGCTGTTGATGATGGCGTCGACGATGACCTGTATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCAAGAAGGGGCACTGCGCCTTCCGGAAACTCTTCGCCGAGTACCTCCCCGCCGTGTTGCGAAGTACGTCAGTGTTCGCGGGTCCCGCCAGATCCGCACGAAATTTTCACGGAGTCCCAAGACCGGCGAAATGCCCTCGGGGGCACCTGCGGGAGTGGGGGGGGCCTCTCCAGGGGGGAGAAAAAANAGGGGGGATATCCATACAAAAGGAGCAGGGGAGTTACTTCCTTTCTTCTGCCACACGCCTGTCGCCCGCCCCCANTNNTAGGTGAGAGCGATCAGCACGCAAGATCAATAGTGGACGACAAACGACAGCAACAAGGACGAGAAACAGCAGATAAGACAACACGAACTAAGTATACAACAAAGCAGCAGTATCACCACACAGCAATGGACAAGACGACTGTGACGGGAAAACAGGAA | |||||||||
gi|86510584|gb|CI153217.1|CI153217 CI153217 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGATGGGGCAC | |||||||||
gi|88324836|gb|CI657708.1|CI657708 CI657708 Oryza sativa (japonica cultivar-group) germinating seeds Oryza sativa Japonica Group TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTGAGGGCGCGGAGGCGGAAGCTTTTCCTCCTCCTCTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCACAGGGAAAGGAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAAGAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGAAGAAGAAAGGCAGGAATNTCAGCTCAAGAGAACAGATCACAATATTTACCCACGGCACTGTCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGCAGTTGTTTGGGTCGATCAGGGAAAATGTNTTCTCCTGGCTTTGTTTCATTGTCAGAGTCATCACCGAGCTGGCCAATTGTGAGTGCAGGA | |||||||||
gi|88461758|gb|CI695604.1|CI695604 CI695604 Oryza sativa (japonica cultivar-group) young ear Oryza sativa Japonica Group cDNA cl TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GATTGCTACCCCCGAGGCGTCCCTCTCAGCTAGCCCTGGCACCCGCACCACCTAGCGGCGGCGCCGTCGTGTTCGTGTCGGCCAAGTCGTCAAGAAGCTAGCTAGTCATTGCCAGTGGGCGCATTGTGCTAGGGGATGGCGAGAGGAGGAGGAGGAGGAGAGGAGGCGGCGGAGGAGGAGAGGGAGGTGAGCGAGGCGCTGACGGCGGACTCGTCGGCCGACGAGGAGTGCCGCCGCGGGAGCAGCAGCTCCAGCGCAAGCTCCGGGGACGCCTCCAGCGAGTCCTACTGCCCGCCCGACGAGTGGCAGAAGGTGGCCATCAAGACCTGCGTGTCGTCCGAACTCGTCGTCGTCTCGGCCGAGCCGGTCAAGGAGAAGAAGCCGCCGG | |||||||||
gi|86822853|gb|CI251891.1|CI251891 CI251891 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTACCAGAGCAGAGCCATTCAGCACGCATCAAGGAACTCAGATTATGAAGGAACGGGAATTGCGGGTTCAATATAAAACCATGTCGATAGATAGATAGAATAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGG | |||||||||
gi|86524665|gb|CI164871.1|CI164871 CI164871 Oryza sativa (japonica cultivar-group) shoot and callus Oryza sativa Japonica Group TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTGTTTTTTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGC | |||||||||
gi|58605982|gb|CK034015.1|CK034015 34112rsiceg_10195.y1 Oryza sativa cv. 93-11 tillering whole plant cDNA library Oryza sativa c TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): CGGAAGCTTTCTCCTCCTCTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCAGAGGGAAGGAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAAGAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGAAGAAGAAAGGCAGGAATTTCAGGGCAAGAGAACAGATCACAATATTTACCCACGGCACTGTGTCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGCAGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCATTACCGAGCTGGCCAATTGTGAGTGCAGGAATATCTGTGACCGCTTCACTTGTTTTATCCTTGTTTCTAATATTTGAGCATCTCTGCGCATACCATCAACCTGAGGAGCAAAAGTTCTTGATTGGTCTCATTCTGATGGTTCCAGTATATGCTGTTCAATCATTCTTCTCATTACTGAACTCAAATGTTGCATTTATATGTGAACT | |||||||||
gi|86869167|gb|CI335734.1|CI335734 CI335734 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GGAAAATGGAAACCCAAAATGAAATTCATAATTGATACCTATTTTGACTATCTGGCTGGACTATTGACCCTCGCCTGTATCCACTCAAATTTTAGAAAGAGAGTAATGGTAGAGCTATCTGTAAAACAATCTAACAAAAATGATCGCATGTAAAATCTGCTTGAAATTAACAATACAAGCAAGGGTGCAGAGCACTTCTTCCACACCCCATGTGTTGCCTACTCTGTATCTCTTACCCGAGCAGAAGTGCTATTGTTGAATCTTTAGGACTGGAAAGGCACTAACATCCCTTATACTCGCCGAGTTGGTCAAAAGCATTACTAGTCGGTCGATTCCAAGGCCCCTTCCGGAAGTAGGTGGGATTCGTACTCTAGGGAAGTCGGAAGTCTTCATCTACGGTAACTTCATAGCACCCCTCATC | |||||||||
gi|86538700|gb|CI178906.1|CI178906 CI178906 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GCGGGTTCAACTATAAACCATGTCGATAGATAGATAGAATAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGGGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGAT | |||||||||
gi|86509881|gb|CI152514.1|CI152514 CI152514 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GCGGGTTCAATATAAAACCATGTCGATAGATAGATAGAATAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGAT | |||||||||
gi|66922311|gb|CX109159.1|CX109159 RECm0451 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TGGCCCCTGCAGGTACGGTCAGGAATCCCGGGTCGACCACGCCGTCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGCGTCGTCGGTCGTCTCCTTCCTCTCGCCAGTGCCACCACAGCTCAAGCGTGATCCAGCGTCGGGCCGCGCGTGCGAGCGAGCGAGCGTGCGAGATGTCGGCCGCCGGGGAGGAGGACAAGAAGCCGGCGGGGGGAGAGGGCGGCGGCGCCCACATCAACCTCAAGGTCAAGGGACAGGATGGGAACGAGGTATTCTTCCGCATCAAGAGATCTACGCAGCTGAAGAAGCTGATGAACGCCTATTGTGACCGTCAGTCTGTGGATATGAATGCTATTGCATTCCTATTTGATGGTCGTAGGCTCCGTGGCGAGCAGACCCCTGACGAGCTCGAGATGGAAGACGGGGACGAGATCGACGCCATGCTCCACCAGACTGGAGGCTGCCTGCCTGCCTAGAAGCTTAGGAGTTCTTGCAGCCTCGTAAAATTGTGCCTTTAGTAGGCTCAATATCTAGAAGTACATGAAAAAAAAGAAGCCTAAAAGAACTTGTGAGGCTTTGGTCCTGTGCCATAGCTGAAGGACATTAGAAGAGCTTTGTTTGGCAAAAATATTTTGGTACTTCGGCTGTTATGACTCGTTTATCCATACCCTAATATGTCCATCGTTGCTGGTGCTTGGCATGTTTTCTTTTGCATCATTTGCTGTTCATTCTGCTGTGTGTNTCGTGGCACAGGCCATTTTAAGTGATTTACTGGTAGCTTGTACCCTTTCTGGTTGTAGAATCCCCATCGTGTGCGAGATGGTCAAATATGAACCTGCGGAGGACCATAAGGCTTGGTTCTAAACTGAGCTAGGTTGGTAACTGACTGTAGGGCTCGCCGGGGCGCGGGGGAAGAGAGACCAATTTTAAAAAAAGGCTTTGGGGCCCATTTGTAGCTCTAAAAAAAGGGGGGACAACGGGGCCAAATATCGACAGGAATACCATCGCCCCGCGCGCCCAGATAAAAAACACCAGGTAACATAAAAAATAGTAGACGAACGG | |||||||||
gi|88976058|gb|CI024303.1|CI024303 CI024303 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTTTTCATATAAAACCATGTCGATAGATAGATAGAATAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGNTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGNCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAAGCGCTCCACGATGGGGCACTGCGCCTTCC | |||||||||
gi|88357933|gb|CI650669.1|CI650669 CI650669 Oryza sativa (japonica cultivar-group) germinating seeds Oryza sativa Japonica Group TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTGAGGGCGCGGAGGCGGAAGCTTTTCCTCCTCCTCTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCACAGGGAAGGAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAAGAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGAAGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGATCACAATATTTACCCACGGCACTGTCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGCAGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCATTACCGAGCTGGCCAATTGTGAGTGCAGGAAT | |||||||||
gi|88345445|gb|CI656103.1|CI656103 CI656103 Oryza sativa (japonica cultivar-group) 11 days after transferring callus Oryza sativ TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GGGGAGCTTTTCCTCCTCCTCTCCTCTCCTCTCTACCCTAGGCGCGATCTGCTCGTCCGCCTCGGCGATCCACAGGGAAGGAGCAGCATGCTCCACAAAGACGCACTACAGAAGACTAAAGAGAGCTTTTTCATACCAAAGAAGTACAACAAAAGATTTGCTCCTCATTTTCTGAATCCTGGGACTCTCTAGCCTGTAGAAGAAGAAAGGCAGGAATTTCAGCTCAAGAGAACAGATCACAATATTTACCCACGGCACTGTCTCGCAATATGGCAATGAAAAATGTTGTCCGTTTCTTTTTCGTGTTAATACATGTGAGCAGTTGTTTGGGTCGATCAGGGAAAATGTTTTCTCCTGGCTTTGTTTCATTGTCAGAGTCATTACCGAGCTGGCCAATTGTG | |||||||||
gi|86899806|gb|CI327592.1|CI327592 CI327592 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): CTGAAATGTAGCAAGAGTTCATTAGCCTGAAAGTGGGTGGAAAGTACAGATTTATATAGTATTCCTGAACTGAAAAATGGCTGTTGGAAAATGGAAACCAAAATGAAATTCATAATTGATACCTATTTTGACTATCTGGCTGGACTATTGAACCTCGCCTGTATCCACTCAAATTTTACAAAGAGAGTAATGGTAGAGCTATCTGTAAAACAATCTAACAAAAATGATCGCATGTAAAATCTGCTTGAAATTAAAAATACAAGCCAAGGGTGCAGAGCACTTCTTCCACACCCCATGTGTTGCCTACTCTGTATCTCTTACCCGACCAGAAGTGCTATTGTTGAATCTTTAGCGACTGGAAAGGCAATAACATCCCTTATACTCGCCGAGTTGGTCAAAAGCATTACTAGTCGGTCGATTCAAGGCCCATCCGGAAGCATGTGGCATCCGTACTCTAGGGAAGTCAGGAACTCTTCATCTAAGGTAACTTCATACGAAAAA | |||||||||
gi|87039128|gb|CI193750.1|CI193750 CI193750 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTGTGGGTTGAAAAATTACGATGTCAGCCCCGTTACGCCACTAGCACTGCATGCAGCTGCCTACTGGCAGCATCTGGGCAACCAACCAGATTTGCATAAAGGTCCCAACCTGACGGCCCAACCGCACCATGCCCACTCTACAATGATCCGGACCCCAAACAAGGCTGTGATAAGACCTCCAGGGCATGAAGCAGCGCCCCAGCGGTTGGGCTGGACCAGCACAGGACTTCAGCGGTTTGCCTTGGCCACCCTCTCAACCTCATCCTTCTTCTTGATTGCGTAACTGTTGCTGGAGCCCTTTGCTGCGTTCATCAGCTCGTCAGCCAGGCACTCGCTGATGGTCTTGACGTTACGGAAGGCTGCCTCGCGTGCGCCTGTGGTCAGCAGCCAGATGGCCTGGTTCACGCGGCGCAGCGGGGAGATATCCACAGCCTGGCGACGCACCACACCAGCAGAGCCGATACGGGTGGCATCCTCACGGGGGCCGCTGTTGATGATTGCGTCCACCAGAATCTAAATGGGGTTCTGGTCAGTTAGCAGGTGGACAATGTCGAAGGCATGCTCCACAATGCGGACTGCCATCAGCTTCTTGCCGTTGTTGCGGCCGTGCATCATGATGGAGTTGGTCAGCCTCTCCACAATGGGGCACAGGGCCTTGCGGAAGCGCCGCTTCTGGTAGCGGCCTGCTGTGTGTGGCACATAGACTGCGAACTTGGGCTTCACAGCAATGT | |||||||||
gi|89180275|gb|CI044554.1|CI044554 CI044554 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTTGACTAGAATAGAGCACTACATATTTTTCTCAGCACTAGTGATGTTCATTCAAACATTAAACCACAGGTAGGTCTGAAAAGGCTTAAATTACTAGCAAAAAGTATAGTCCTGCCAAACAGCGCAAGAGCTTTAGCACAATGACATGGGATCACCACTCAACGGTTGGCCTTGGCAACACGCTCGATCTCATCCTTCTTCTTGATGGCATAGCTGTTGGATGAGCCCTTGGCGGCATTAATAAGCTCGTCAGCAAGGCACTCAGCAATGGTCTTGATGTTCCTGAAGGCGCTCTCCCTGGCACCAGTGGTGAGGAGGTAGATTGCCTGGTTGACCCTCCTCAAGGGAGAGATATCCACAGCCTGCCTCCTCACAGCACCCGCAGACCCAATACGGGTCGCATCCTCACGAGGGCCACTGTTGATGATGGCGTCGACGATGACCTGAATGGGGTTGGCGTCGGTGAGGAGGTGGATGATCTCCATGGCGTGCTTGACGATGCGCACGGCCATGATCTTCTTCCCGTTGTTGCGGCCGTGCATCATGAGCGAGTTGGTCAGGCGCTCCACGATGGGGCA | |||||||||
gi|86842277|gb|CI335206.1|CI335206 CI335206 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): AAATCCGTGCAATGTGCAAATACTTTATATCTCTGAAATGTAGCAAGAGTTCATTAGCCTGAAAGTGGGTGGAAAGTACAGATTTATATAGTATTCCTGAATGAAAAATGGCTGTTGGAAAATGGAAAACCAAAATGAAATTCATAATTGATACCTATTTTGACTATCTGGCTGGACTATTGACCCTCGCCTGTATCCACTCAAATTTTAGAAAGAGAGTAATGGTAGAGCTATCTGTAAAACAATCTAACAAAAATGATCGCATGTAAAATCTGCTTGAAATTAACAATACAAGCAAGGGTGCAGAGCACTTCTTCCACACCCCATGTGTTGCCTACTCTGTATCTCTTACCCGAGCAGAAGTGCTATTGTTGAATCTTTAGGACTGGAAAGGCAATAACATCCCTTATACTCGCCGAGTTGGTCAAAAGCATTACTAGTCGGTCGATTCAGGCCCATTCC | |||||||||
gi|88994227|gb|CI116191.1|CI116191 CI116191 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTGAGGAAAAACCTCAGAAGAGGTCAGGGAGAGCCTGTTTTCATTAAAGAAGAAGAGACTTGACCCAGGTTTTGAGGGGAAACCGGGCCCAAAAACCTTACATAAGCACGGTTTAAAGGGGAAACCGGGCAAAACCCACAAGGAGAACAAAGAAAAAACTTGCGACGGCACAACTGGAGGAGAACATAGCTCATCAAAGCCAAAAACTCCGACTTCCTATGAACAGACCACAGACAACGTAGAGCAGGGTCTTCAAGACGAAGCCTCCAAGGAGGAAACAGAGCGTCGAAACGCAAGCAACGTCCGTCCGAAAATCGGAACAGGGTTTTCACCCGAAGAAAACGGGTAGAGCAAAGAACGATGCCTTCAACAAGGAAAACGGCGCCCACAGGCGTCGCCATCGTTGCCTCTATCCTAAGAACGAGCAGGACAAAACGCCCCGGCTCGCTCTCCCTGCCAACTACGACACCCCTGGCTTCCACAACGCTACCAAGGAAAGCGGGAGAGGGTTATCGTTGCCGAGCTTGTCACCTACAAGCAG | |||||||||
gi|86434332|gb|CI094675.1|CI094675 CI094675 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage Oryza sativa Jap TTGACCAGCTCGGCCATGAT EST sequence (targeted fragment marked with yellow): GAGGAAAAACCTCAGAAGAGGTCAGGAGAGCCTGTTTTCATTAAAGAAGAAGAGACTTGACCCAGGTTTTGAGGGGAAACCGGGCCCAAAAACCTTACATAAGCACGGTTTAAAGGGGAAACCGGGCAAAACCCACAAGGAGAACAAAGAAAAAACTTGCGACGGCACAACTGGAGGAGAACATAGCTCATCAAAGCCAAAAACTCCGACTTCCTATGAACAGACCACAGACAACGTGGAGCAGGGTCTTCAAGACGAAGCCTCCAAGGAGGAAACAGAGCGTCGAAACGCAAGCAACGTCCGTCCGAAAATCGGAACAGGGTTTTCACCCGAAGAAAACGGGTAGAGCAAAGAACGATGCCTTCAACAAGGAAAACGGCGCCCACAGGCGTCGCCATCGTTGCCTCTATCCTAAGAACGAGCAGGACAAAACGCCCCGGCTCGCTCTCCCTGCCAACTACGACACCCCTGGCTTCCACAACGCTACCAAGGAAAGCGGGAGAGGGTTATCGTTGCCGAGCTTGTCACCTACAAGCAGCTCC | |||||||||
gi|87025050|gb|CI263558.1|CI263558 CI263558 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TTGACCAGCTCGGCCATGAT |