| mature miRNA: TTGAGCCGTGCCAATATCA species: Euphorbia esula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|76856382|gb|DV147375.1|DV147375 CV03072B1B10.f1 CV03-normalized library Euphorbia esula cDNA clone CV03072B1B10.f1 5, mRNA se TTGAGCCGTGCCAATATCA EST sequence (targeted fragment marked with yellow): CATTTGCTTCATACTTGTATTTATATTTTCCCTAAGCTATTCGTACTTGACTATGAGAATGAGCATGGACATTCTTTTGGCTAGTCTTTTGATACTTGGCATATGAATCATGGTTTTTATCGCTCGTATTATGAACTATGATTCTGTTTCCTTCCAGTTTGGGTGAACATGCTATAGGTCACTAGGCAGTCATATCATGTACTACCATATGTCTAAAATATATAATTGGGGTGATATATTGCTCCTTTTTCTCATATTTTAGATATAACCATTTATCCCCTTTGTCGTCTGATATATATTATTAGTACCTTTTTCTTTAGAAAGTGATTACCGTGTACTGTCACAAAGCTGGTGATGTCTTGATATATATTTTGTTTACAGTTTACCTTATGGATTAGCTTTACTTATAGTATTGGTTTACAGATTAGCATTACTTACAGTAGGCATTTTAACTTATTAAAAGTTGGGCTTAAAGTTCCGAGTACGATACCGTGAGTTATTTCTCATGCTGCTACTGTATTATGCATCACATTGGCATGGCTTAAGTTCATTATCTTGCAGAGGTCGGCCGTGTTATTGGCTTTTCTTTTTGCCATTCCTGAAGTTATTGTTTTTTTTTTCTTTTTCTTTTTTTCGGTTTCTGTTTTTTTGCAGGGAGATGATCCAGCACAGGCCGTACACACAGAAAGTGGACGTGTACAGTTTCGGGATAGTTCTATGGGAACTGATAACGGGAATGCTTCCATTCCAGAACATGACAGCTGTTCAGGCGGCTTTCGCAGTGGTCAAC | |||||||||
gi|76842821|gb|DV133819.1|DV133819 CV03106B2B03.f1 CV03-normalized library Euphorbia esula cDNA clone CV03106B2B03.f1 5, mRNA se TTGAGCCGTGCCAATATCA EST sequence (targeted fragment marked with yellow): GGTCACGTTTGTCGCCTTAGAAAATCTTTGTACGGCTTGAAACAAGCCGGACGTCAGTGGAATAAGGAATTTACCACTCAAGTTATTGCTTTTGGTTTTAAACAGGCTGCTTCTGATCATTGCTTGTTTACATATTGCAAAGATGACATTTTCCTTATACTTCTTGTTTATGTGGATGATGTCTTGATCACGGGCAATTCGGATACTTCTATAACTGAAGTTAAAGCACATCTCCATGCCCTTTTCACTATTAAAGACATCGGTCATGCTAAATACTTCCTCGGAATTGAAATTGCTAGAGATTCAAGTGGTATATTTTTATCTCAACACAAGTATATTTCAGATTTAATTTCCGAAGCAGACCTTTGTCAAGCTAACCCTTCTCCTTGTCCAATGCAACCGGGTATTCTTTTAGACCCTGAAGTTGGCACGGCTTATTCGGAACCCGACAAATATCGTCGTTTTGTTGGAAAATTGTTGTATCTTAACTTTACACGTCCAGATATTGGTTTTGCTGTTCAACAGCTTAGTCAATTTATGCATAGCCCTTGCACTCACCATATGGATGCTGTCTTGTACCTTATTAAATATCTTAAGGGCACAGCCACTTATGGTTTATTCTATAGTTCAGTTAACACTTTTCAGTTAACAGGCTATTGTGATGCGGATTGGGGACGATGTAAGGAAACTCGAAGATCCATTNNTGGTTATTGTATATTTTTGGGTAATTCTCTCATATCTT | |||||||||
gi|76850908|gb|DV141901.1|DV141901 CV03129B1F03.f1 CV03-normalized library Euphorbia esula cDNA clone CV03129B1F03.f1 5, mRNA se TTGAGCCGTGCCAATATCA EST sequence (targeted fragment marked with yellow): CATTAAACGAAATCCGGACGGGTCAGTTCATCGTTACAAGGCTCGTCTTGTAGCCCGTGGGTATAGTCAAATTCAAGGTATTGATTACATTGAGAGCTTTTCTCCGGTTGCAAAAGTTGTCACTGTTCGTTTATTATTTGCCATTTCCGCTGCTAAAGCATGGCCAGTGCATCAAATTGACGTAAATAACGCATACCTTCATGGTTTTGTGGATGAAGAAATTTACTTGCAACCACCTTTGGGATATACCAAAGCTCAGCCCGGTCAGGTTTGTCGCCTTAGAAAATCTTTGTACGGCTTGAAACAAGCCGGACGTCAGTGGAATAAGGAATTTACCACTCAAGTTATTGCTTTTGGTTTTAAACAGGCTGCTTCTGATCATTGCTTGTTTACATATTGCAAAGATGACATTTTCCTTATACTTCTTGTTTATGTGGATGATGTCTTGATCACGGGCAATTCGGATACTTCTATAACTGAAGTTAAAGCACATCTCCATGCCCTTTTCACTATTAAAGACATCGGTCATGCTAAATACTTCCTCGGAATTGAAATTGCTAGAGATTCAAGTGGTATATTTTTATCTCAACACAAGTATATTTCAGATTTAATTTCCGAAGCAGACCTTTGTCAAGCTAACCCTTCTCCTTGTCCAATGCAACCGGGTATTCTTTTAGACCCTGAAGTTGGCACGGCTTATTCGGAACCCGACAAATATCGTCGTTTTGTT | |||||||||
gi|76831363|gb|DV125063.1|DV125063 CV03041A1H07.f1 CV03-normalized library Euphorbia esula cDNA clone CV03041A1H07.f1 5, mRNA se TTGAGCCGTGCCAATATCA EST sequence (targeted fragment marked with yellow): CGACAGCCANTGCGGGTTTTGGTGTTGTCGATCAAGGTTTTGGGCTTGAAAACATCGCTGGCAACCANNNNTTTTAACCAAACCCCCAATTTTCTACCGCGGGAGATGGAGGAAAAGCCGCAGATTTTCAATCCCCAGATGATAATCAACCAAAATCAATCTCAGTTTAGTCAAAATCAAGCTCATTTTCTTCCATTACAATATGCCCAATCGCAAGAGCATCATCTCCTCTCTCCACCGCCGATGAAGAAACTAAATTCCGGCCATATGAAGGTACACAATTTCCCAGATTCAGCCTCGCCTGAGGCTTTTCTCCTGCAAAATCATCTCCGGCAGCAGAAAATTCCGGCGGCAACAGATGAACAAACAGCACAGCAGCTCCAGCAATCGGTAATTCACCCAATTTGCCAAGCAGCAGAGCTGATCGGAACCGGAAACCCGGCACTCGCGCAAGCGATATTGGCGCGGCTCAATCACCTACAGCTCTCATTTTCCGTCGGTAAGCCTCAATTTAGAGCTGCTTATTATTTCAAAGAAGCTTTACAGTTCCTCCTCAATTCCTCCTCCTCATCATTGTCCCCCTGTAATCTCATCTTCAAAATCGCTGCTTTCAAATCCTTCTCCGAGATCTCACCGGTTCTTCAATTCTCCAATTTCACTTCTAATCAAGCTATCCTTGAATCCATTGATGGGTTCCAGAAGATTCATATAATTGATTTCGATATTGGGTATGGCGGGCAATGGGCTTCTCTTATGCAAGAATTAGCTATAAAAAATGTCTGTTCTGGTTCGAGTTCCGG | |||||||||