| mature miRNA: TTGATAAGATAGAAATTGTAT species: Arachis hypogaea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|224932824|gb|GO261307.1|GO261307 VBL1_24_F19_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi TTGATAAGATAGAAA-TTGTAT EST sequence (targeted fragment marked with yellow): TGTCGCCGGAAAATATTAACTGCCGGCAGGGAGATTGGCATGGGGCGTGGTTATACGTCCGTAGGGCCAATGGCTCCCTTTTATGTGTTCCCTTGTGGACATGCCTTCCATGCACAATGCCTGATTGCCCATGTTACTCGCTGTACAGTTGAATCCCATGCCGAGTATATTCTGGATCTACAGAAACAACTTACTTTGATAGGCAGTGAAGCAAGAAGGGAATCTAATGGTACCCTTTCTTCATCAGAGGATTCTATACCTAGCATGACTACTGTAGACAAGCTCCGAGCACAATTGGATGATGCTATAGCTAGTGAATGCCCATTTTGTGGAGAATTGATGATCCGAGAGATTTCTTTGCCTTTTATACTTCCTGAGGAAGACCATCATGTTGCATCTTGGGACATCAAACCAAACGTTGCATCTGGACCCCAGAGGAGTATTTCCCTGCCTGTTTGATTTGGATAAATTGTTGCTGATACTACACCAATGTAACATTAGCTCAGTGTGTTTTTTTCTGTTATTCTTTAATCCATTTTCTCTCTATGTTTACATTCTCTTCCCATGTTAGTGTTTACTGTTTATGTAATGATTTTAATTTCCAGGGTAATTTTATTGACCCAATGTCCCAATCCCCATTGTAAATCCTGTGCCTTATTGTAGCCTTTTTGTTACACCAATTTTTGTTCCTATACAATTTGAATATATTCCTTTTCCTGATAAAATTTTCTATCTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|225611443|gb|GO339770.1|GO339770 VBL6_60_G24_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga TTGATAAGATAGAAATTGTAT EST sequence (targeted fragment marked with yellow): GTACTTTTTTTTTTTTTTTTTTTTTTTTTTAATTACAAATTATGGGATTGGAATTTCTAAATAATACTACAAAATAAATATTTGGTCCCTATCTTCTCTGCATAACATTCAAATATTATCCCAAATAAACAAATTAGCTATACCAAACTCAACCAAAATCTCTTAAACCATTGCAGTACTCTACCACATACAACTAAAGATCTTCAGGTTGTATCCCTCTGAAAAAAAAATGTAATTTATGTGATTACAGCCTTTGTATAACAAAATTTTTATCTTATAAAAAACCTACAAAAAGGCTTCTGGTGCATGGCAAAATATGTGTGGTTGATGTGTGGTACTGGTACAGCATCTCCAGTGAACAAGTAAAAAGAGGGAGTCGAGTCACTAAAGTTTTGCAAAAAAACACAATGAATTGAACCTGATATTCAACAAGTTGTTTTGCCTGCTCCAATGTAGGGTCGGCTGAAAATCACATCTATCCATTGTTCAACTCAGTATTGCTTCTTCCAAATTCAATGGCATTGCTGAATCAACTGAAAATCCCAACTCCGACATTAGCTTTTCCAAGCGATTCACATTTGTCAAATAAAGATAGCCAACCAATGTTTCTAGTGAAAATGCTCTGTTGTATACAGCTGCACCAGCACGCCTTTTTGTCTTGGTTTTGCTTGAAATAATATTCTTTCCCCATCGAAGAACATCCCTCTCTTGATCTGATAAAAAGTTACTGTTAAGAAGCCTCTGAAGCAATGCATCCTGAGCTTCACATCGCACCACTGCCATGACA | |||||||||
gi|224935990|gb|GO267538.1|GO267538 VBL1_42_P22_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi TTGATAAGATAGAAATTGTAT EST sequence (targeted fragment marked with yellow): TCTGCCATTGCTATCATCACCATTCACCAATTTCACCATGATGTCTTTCACTGCTACCTTTCCTTAATCATGTAATCTCAATGTTAAACTATATTAATAGAGCAATGATATTTATCATTATTAGATTAGCAGAGATAAATTGTATATTTATCATACTACTACTTTTTCTTGGTATCAATATGTGATTATTGAGAGTGTTAATATTATTATTATTTTCTTCCTTTTGTAAATAAAAACACACAATTATTTATATTACACCTTACAACATTATTCCTACTGTATAATTGCATCATTGAGGAATTATTGAATCTAATTCTAATAGTTCATGAATATATTTTATCTATAACATGAGCAAAAGAAATATTTGGAGGAAACATTAATCTCTAAGAGATAAATCAGAGGGAGAATAGAACTTCAAAAAAAAAAAAAAAACTGTATATTCTAATATTCTATCATAAAAGGACTAACACTTGATAGTTTAGAGTTGAATTTTTTTTCTTAAAAAAAATAATTGTACGCAGACAGATCGGAAATCAGAAATATATATACACACATAAAATTTTCACGTGACACGACCATGTGCATAGATTTGTGTTGATTATATTAGATTAGTCATATTAACGGCATAAAGGTTCTATCTTATAAATCAATTATAAAAAATGTACACATAATATAACTTAAGCCATACGAACAATTAATCTGAATCATAACAATCATTCATTTGGGTTTTCTTTTTTTATATATAAAGTGCTGTAACTTTCCAATATACTTTCGTAAGGAGGAGGAGAACTGTGAAGGCAGGGTCATGATCCATGTGGCAGTATTTAATATTATTAAAATT | |||||||||
gi|225608352|gb|GO337631.1|GO337631 VBL6_54_J22_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga TTGATAAGATAGAAATTGTAT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTACAAAATCATCAAATATTTGATATGTCACCGCATAATAAATTCACAATACTCCTGAGTTTCATACTGGAGAGTAAAAAATAAGTATACCAGAGAAAATAAGTATACAAAATATTTCTAGCTAAAAATTGGGTCTAACAAGAAATCACCAAAATGACTGGGACCTTTATGTGCCTAATACATTCTTTATGTTATCAATGAAATCAATGATCAATGATGTTGCATTTTATGGTGTTATTTTGTTATCTTTCTTAGCAACATTACTTTTTTTTCACTATTAGTATCAGCTCTAGATACTCTTGTGTCTTTTTCAACATCTGAATTCAACATCCAATCTTCTGAGTCACCAAGTGCACTCTTTAGTGCATTATGATAGCCAGAAAAATCACTGACCTTACCCTCTTGACCCTACTTACCATTCCTTTTGTCGCTCTTGATTTGATGTGATTACTCATCGTCACTGCTGCGGCTCTTGTAGTCTTCCCCGAACTGTCTTGCCGTGTCGTTTTCTTCCCCGTCGGACTCCCACATTGCATTCTCGACATCACTGAACATACTTTCTGATTCAAAATCTTCTGTGGCTATATTCCTCTTAAATTTACCCT | |||||||||
gi|224932962|gb|GO262597.1|GO262597 VBL1_28_M07_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi TTGATAAGATAGAAATTGTAT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTAGCCTTGAACTTAGAAGAACACAACTAACTCATTTCGATACAGAACAATATCATTGCAGGTAATTGTTATTAAAAAAATTCCTAACAAAAAAAGATGTAATATCATTTAATTTATATTTTGTCAATGATAAACAAAGATTAATGTCATTTCTTTTGTCCTTTCAAAAAGTTCAATGCAAAACAAGATATCACAATTCTACAGGTTTTAATTGAATTCTTCTCTATAATAGGCAATCAATTTAATTGAATAAACCTGAAGCGTTTATATGTTTTTTTATGGTAAACAAAATCTGACAGTTTTTCAAGATGCAAGAAGTTATTGACAAGGAGATGTATGATGAATTACGAAGGATTTTTTCCAGGTACACAATCTTTATATTCTCCTAATTTTTTCATTAATACTCTTATAGTTTGATATTTAAAAACAAAATTTATAAGCATATTCATTTCTTCTATCCTTCCACTATTTGTAGGAAACTGAAGGCCTCTTCAGATTCAGAATCATATTTTGGCCTACCACTTAAAAAAGAAAAAGACAAACATGAATATCTATGATATTTAGGCAAAAATAATCTTTTGTAAATAACTAACATGCATTTGGGTTTATAGATATACTATTTTTAAATTAGGATAACATTTTTGCCGTTATTTCTTGAACTATACCTTTTTCTGATAATATATACATATATCTTTATT | |||||||||
gi|110812176|gb|EE124854.1|EE124854 E78 Peanut (Luhua14) seeds full length cDNA Library Arachis hypogaea cDNA 5', mRNA sequence TTGATAAGATAGAAATTGTAT EST sequence (targeted fragment marked with yellow): AGCAACCATCACCAATACAAACATGCACAAATCAAATACAGTTAACAATACCAACAACACATCAACCGGTATTTATACAATTTCTATCTTATCAACAAACCAACAACACATGTAACATCAGAAATTTAGAACACAATCAACAGAAGTTCAGATGACAAACTCAGAAATTAAAATCCATTACAATTAGACAATAAAATCAGAAATCACCCCATTTACAAATACCATCAACAATCAACCAT | |||||||||
gi|224932135|gb|GO262082.1|GO262082 VBL1_27_B22_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi TTGATAAGATAGAAATTGTAT EST sequence (targeted fragment marked with yellow): AGGGCTTTGGAGCGAGTTGTCATTGGGTGAGGAGTTGATAAGGGTGGCCTTACTAACCAAATCCACAGGAACCCAACCCATTAATCACAACTGGGGCGGGTTCAATCCTGATCCACAGTCGAGCAGGCTGGTTGCTGAGCAGATCATGTTGCATGTTTATTCAGGTTTAGGGCGAAGCCACCCTGACCGAACCAGCATGGAATGCATGCATGCATGCATGGCATACATGAGTTGGAATCATATGACACTAGTATCAATTTAAACAAACTTACACCGCTCGTAACTTTTTATAGAATATATATCTTATCAATCCAACCAATGAATGACAAAGTGAAAATCATCGAAGAACCTCTATTTATGCATGTTTTAAACAAATATATTACGTTGATTTTCAAGTATATAAACAGTATAATAAACAATTTTGGATTCACATGAAATTTTCTCGAGATAATATATAAGCTTTTAATCCAATGGCTAGGTTTTCAAAAAATTACATGAAGAAAAAAGTTATTTAATGGTGTAACATTTACACTAAGATCAAATGACACCAGTGTAAATTAAATTAGCTCTTACACCATTGAAAAGCTTTCCACTGGAGTTTTTTTTTTTTTTCCTCTCTATATAATACATGCATATATCAATATTAATATTTTAATAAAATCTACATGATATATTAATTTATTTTAATTTCTTTACCTTTAATAGCTTAGAATTAGATGAAGAATCATATAATTTTATGTTTGAATGTGCTTTGGGTTATTGTTGATATCAAA | |||||||||
gi|207404341|gb|ES720251.1|ES720251 TFR5_13_C06_E001.g1 USDA-Tifton Peanut Library TFR5 Arachis hypogaea cDNA clone TFR5-013-43_ TTGATAAGATAGAAATTGTAT EST sequence (targeted fragment marked with yellow): ACTTGTTGGACCTCTAATGACACCTCCGGTCAATGTTACGTCAGTTGCAAAAGTTGCGGTTAGAGCTGCAACGGACCCTGTTTTCCCTCCCGGTATCATTGATGTTTATGGAATTCAACGGTATAGTCAGCACAAATCAAAGTAGAAATTTTCTTCCCCATTTTTTTTACTTCACTCGGAGCGGTTTGCTTCTACCAGATGCCATCTCTTTCACGGAATAATGTCTGAAAGGCGTGTGTATGTAACCATAGATGTTTCTTTCCGATTTCTTTAGTTTCAGCATTCATAATCTTCTTTTTCAACAAACTCTGTTGCCTGAAGTGGGTTTGAATATACTTTATATCTTGTCAGAGAGAGAGAGAGAGAGAGAGATTTTGATGAACGTAAACGTGTTGTACGCTTTCAAAATTTTCAAGGTAAATAAAACAATCACTTGCTTCACNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|224927573|gb|GO257345.1|GO257345 VBL1_11_B22_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi TTGATAAGATAGAAATTGTAT EST sequence (targeted fragment marked with yellow): TTCTCCAACATGCAAAGCCATTGAGCCAGATCCCACTTGTTGGACCTCTAATGACACCTCCGGTCAATGTTACGTCAGTTGCAAAAGTCGCGGTTAGAGCTGCAACGGACCCTGTTTTCCCTCCCGGTATCATTGATGTTTATGGAATTCAACGGTATAGTCAGCACAAATCAAAGTAGAAATTTTTTTCCACATTTTTTTTACTTCACTCGGAGCGGTTTGCTTCTACCAGATGCCATCTCTTTCACGGAATAATGTCTGAAAGGCGTGTGTATGTAACCATAGATGTTTCTTTCCGATTTCTTTAGTTTCAGCATTCATAATCTTCTTTTTCAACAAACTCTGTTGCCTGAAGTGGGTTTGAATATACTTTATATCTTGTCAGAGAGGGAGAGATTTTGATGAACGTAAACGTGTTGTACGCTTTCAAAATTTTCAAGGTAAATAAAACAATCACTTCACACTTCATGCATAACATTTACATCAACTTGTTTTGTTCGATACTTGAATTCAAATTCCAGTACTTTTTCTACTGTCCCCAGAAGTTTATAGTTTTCTGTTTTCGTTGGTCAATATTCTTTTGGTATTTGATATGAAGTTTCCTGTTTTATAAATTTTGACCGGACGAGCATGGATGATCAACGGGGAAAAAAAGAAAGAAAAAAGAAAAAAAAATGAAATAGCGAGCAGAACATTCTTAAACTCTGAAAAAGAAAATTCAGATGTATAACATTAAGTTGGATCATTTCTTGAATG | |||||||||
gi|149649031|gb|ES757426.1|ES757426 C20L_95_G09_E002.g1 USDA-Tifton Peanut Library C20L Arachis hypogaea cDNA clone C20L-095_G09 TTGATAAGATAGAAATTGTAT EST sequence (targeted fragment marked with yellow): AGAGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATCGAAAAAAAAAGTAGTTCATATATGAATATACCAACCATGTTACAAGCATAGTATAGTTCTTATCTTATCAATACACTGACATGATATCTCTGAAACACACAGGATAACAATAATACTCAATGAAAAAATAAATTTTCTTCTTATTTAAGCCACAATACTGAAAAACCATAACTCCCTTAAATGGATATACTGTTTGGAATGCCTCTGAAGGGCAACCCTTCCTCACTTGAAG | |||||||||
gi|224929363|gb|GO259550.1|GO259550 VBL1_18_N13_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi TTGATAAGATAGAAATTGTAT EST sequence (targeted fragment marked with yellow): TACTTTTTTTTTTTTTTTTTTTTTTTTGGTTGAAAAAACATCGGGGAACAAACTGTAATGTTAAATTCTTATAACAATACCAGAAATATGCATCAACAACAACAAAGCCTTGTTCCACATAATACAAATTTACAAGCGAAATATCGAAATGTAAAGCCATCGCATAGGACATGAAAGAAAAAAGATTAACAGCAAACAAGAGCAGGATTAACCGGTAAATACAAGGGGGCAAGATTATGATACGATATTTATATTATCAAGCCATAGCTTCTTGTGCTTGTACATAAAAACACTACTTGCAGAAGTGAAAGTGATTTTCAATTAATATAAATTACACAAGAAACGATGCCAACAGCAATTCTTTGTAATTTTGATGAAGATCATGCAATGGTTTATCAACAAACAGATAGCTTCTACGGTTACTCCCATTGTACCAAAAAGAAAAAGTTACTCTCAAATATTCATTTAAAAGCTACTGGGACATCACTAATTTTTT | |||||||||
gi|225599375|gb|GO325111.1|GO325111 VBL6_16_K14_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga TTGATAAGATAGAAATTGTAT EST sequence (targeted fragment marked with yellow): CTGTCGTAGAAGTTGCAGCGGCAACATAAGGCAGCGTACTTGATGGGTGCAGGTCGTCGATGGTAGCAATGAGTGCTAGCATGACTTTTCCGCAGCAGTTGAGAATATGACAGTCCAGAACAATGGCGTGATTCTTCAAGCATTTTTTGTATATAACTGGTTATAGGTGGTTGGCCGCAGTAATATGGTGAGGGGCGGTGATGAGTGGAAGTGAGCTGAGATGAGTCAAGTTAGACCAAGCTCAAGTTCGGCTTACGAAAATTAAGCTCGGTTCACGATTCTCGAAAATATTATTATTTTTTCATTAAAAAGGGCTCCATAAAATTATTATCTTATTAAGTAATCGTGAAAATATTATTATTTTTTCATTAAAAAGGGCTCCATAAAATTATTATCTTATTAAGTAGCGTATACAAAGAAAAATAAAAAAAATATTAAAATACCATTAACTATAATTAAGTAAAATGAAATAAATATATTAAGTTTCATATCGATTATATATAATGTAAGAATCATATATGGCATGAAACTTAATAAACTGGCTTCATATATATATAATGTAAGAATCATATAGAAGCATATTAAGTTTCATATATATAATATTAAAATTCTCCTAAAACTATAATCAATCAGAATCTTATAGGACTCATCCAGTATAATGCAATACAAGTTTGGTTGGAGGGGAAAAAAATAAGTGAAACCTTTTATTTATAATACACTATTTAAAAAGAATATCTTATTGTGTTAGTAATATTTTATGTTGTAGATTTAAAAAGTAAAAATATTTAAATTTATTTTTATTTTTATGAGTTA | |||||||||