| mature miRNA: TTGCTGTCTCAAGCTTGCTGC species: Saccharum officinarum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|36053289|gb|CA293230.1|CA293230 SCAGFL8042A04.g FL8 Saccharum hybrid cultivar (mixed) cDNA clone SCAGFL8042A04 5', mRNA seque TTGCTGTCTCAAGCTTGCTGC EST sequence (targeted fragment marked with yellow): AGAGACAGAGGTTAGATTTGTCTGCTCGGAGCCTACTGTACTGATCAGTTCAATCAAGGAGATCTCTTCCTGCAAATACGTTTTAACAATTCAAAGTCCGATGCTTTGCAAGAACCCGTTGTTCCAGCAAGAAAAACGAACCCTCTCCATCCACTGCAATGAGTTGCCTGCTAAAGCAGAATCCAGTGCAGAGGATGACGCCCTTCCAAAAGAAGCGCAGATTTCCATCATCCCTGATCAGGATGATCTACATGGTTTTCGAGCTTATGCTACTTGATATGCCTCCAATAATCATGTCTGATGTAGAAAAAGCACAGTTTTGGAGGCGCAGTGGCAACTGAGCAACACTATGTATCAACTATACCATGGATCCTACAGCAGAGGTTCCTTGTAAAGCAGGTTGAGACGATCATAGGATGATTATTACGAAGGTAGAAGGTTTCTCAGGCCCAAAGAAAAGGCTCCTGTTAGTAAAGGTATTACTATTAGTAAAAGGAAACAAGTTTGAGATAGTAACATTTGCTTGATATGTCTACGACAAGAATAATGCAGCATTCTTGAAATGTAGGTGTGCGAGCAATTTTTCTCGAAANANAANNNNN | |||||||||