miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TTGCTTGTAACGTTTGACCAC
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|88721826|gb|CI743338.1|CI743338 CI743338 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa

TTGCTTGTAACGTTTGACCAC
|||||||.|||..|||| ||
AACGAACGTTGTGAACTTGTT

EST sequence (targeted fragment marked with yellow):
TGTTCTCATATCCTTTCTCTATGGGTACCCAAAATGTTTAGACTTGTTCAAGTGTTGCAAGCAATTTCTATGTGTGCGTTCTTGCTTGTAGATGCAAGAGCTGTCCGATTGTATCCTTCTCTTCAAGAGGAAAATAATTCATTAGGGCAATATCTGCTACATGCTGCACCCAATCAGAAGATGATGCTGTATAAGACATTCATGATGTCAAACTCCATTCTGACAAGAAAAGTTGTACACGACATTAATTCAGCGAAGGTGTCATATTTTGCCACGCATCAATCTACTGGTCCTAATGAGAATTACTACGGGCTACGTGCGACGATGGATGTGTATGGTCATGAACTAAAACCCGGTCAGCTGAGTGGAGGTGCACTTTGGGTCAGTCATTTCGGTGACGATGGCAAA



gi|86895490|gb|CI331324.1|CI331324 CI331324 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TTGCTTGTAACGTTTGACCAC
|||||||| || || ||||||
AACGAACAGTGAAATCTGGTG

EST sequence (targeted fragment marked with yellow):
CAAACGAAAATTCTCATGTTTAATGCACAACTATTGATATCAGAACTAAATATATATCTAAAATAATCCAAATGCTGGACTCACAGCAGTTGTTGACCGCGACAGGAGCATCTTTGAGTTTTAGATCAAGAGGTATAGCAGTGCTGTCCGGCTCAGGTGTTGGTGATGTGACTAGGGGTAAAGAAAAATGACATACGTGGTCTAAAGTGACAAGCAAACATACCGAACTTGCTACCAAGGGATCCTTCAAATAAAGGACAGTTGATTCTTGTGCATGCCCAATTCAAAACTCTAGTTCAGAGGAGCATCTTCATGCTCCCTTCTACGCAATCACTCGAGCAGCTTCACGTTTCGATGCAAATTCCAATTCTTCTGGTGTGAAGGGAAGCGGCTTTGTTGGGGCAGGCAGGGGGCAATGCTATAACCTTGTCTCGTTGCTGGGTGGGGGCCTGCTGCTTA



gi|33799354|gb|CF325536.1|CF325536 JMT1--03-I03.g1 AtJMT-overexpressing transgenic rice lambda phage cDNA library (JMT1) Oryza s

TTGCTTGTAACGTTTGACCAC
||| ||||||||||||| ||
AACAAACATTGCAAACTAGTA

EST sequence (targeted fragment marked with yellow):
GCACGAGGGCGGCGGCGCAGGTGGCCGGCTCGGCGGCGGCGAGCGCGGCGCTGCGGGCGCTGTTCGGCGGCGCGCCGGAGCACTTCTTCGGGACGGCGCCGGCCGGGTCCGACGTGCAGTCGCTGGCGATGGAGTTCATCATCACCTTCTACCTCATGTTCGTCGTCTCCGGCGTCGCCACCGACAACCGAGCTATTGGTGAACTAGCTGGCCTTGCCGTTGGAGCTACCGTCTTAGTAAATGTGCTCTTTGCTGGGTACACGTCTTGAACCATTGATATTACTCCTTCCGTTCCTAATTAGATGTCATTCTAACCTAATTAGATGTCATTCTAACTTTTCGCTTGCAACGTTTGACCATTCATCTTATTTAAAAAATTAGTGCAAATATAAAAATGATAAGTCATACTTAAAGTACTTTTGATAATAAAGCAAGTCACAAACAAAATAAATAATAATTCCATAATCTCTTTAATAAGATGAATGATCAAACGTTACAAACAAAAACTCAAAACGACAAGTATTTTGGGACGGATATTGTACC



gi|88268285|gb|CI378220.1|CI378220 CI378220 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGCTTGTAACGTTTGACCAC
||| |||||||.|||||| ||
AACAAACATTGTAAACTGCTG

EST sequence (targeted fragment marked with yellow):
GGTTATCAACTTTTCATTAATTATCCACCAGAATATGTGTATCGATAATGAACACTTCGCAATGACTACGATTCATTAACCACTAGAAGATACTACCTCCGTCCCAAATTAGATGTTGTTTTGACTTTTTGCTTGCAAGGTTTGACCATTGGTTTTATTTAAAAAATTAGTGGAAATATTAAAAAAAAATGTCATACTTAAAGTACTTTTAATAATAAAGCAAGTCACAAAAAAAATAAATAATAATTCCATAATCTTTTGAATACGACTAGTCGTCAAATGTTACAAACAAA



gi|163925471|gb|EG715364.1|EG715364 Os6CPREST0917 6cm rice panicles Oryza sativa Japonica Group cDNA clone 6CPR-E2A05SA, mRNA se

TTGCTTGTAACGTTTGACCAC
||||||..|||||||||||||
AACGAATGTTGCAAACTGGTG

EST sequence (targeted fragment marked with yellow):
ACGGCCGGGAGGCTAGAATTAGGAATGGCATTGGCAGTAGCATCAGTGTTAGGTGTTCTTTTGTATGGTGATATATTGGTTATTTTGGAAGGTGGGTGATGGATGCAGATCAACAGATGAGAAATACATGGCTTCCGTAGGTTGTTCAGGGTATTGACGGTGATATATCCAATAATAAGTGTTCTTTTGGAGAATTGAATGGAACTCCATCCGTCCCATAATATAAGAGATTTTAAGTTTTCATTTGCAAATATTTGATCACTCGTTTTATTAAAAAAATTTTGAAATTATTATTTATTTTATTATCTATAGTACTTTAAGCATAACTTTTTGTTTTTTATATTTGCGAAAAAAAATTAAATAAGACGAGTGGTCAAACGTTGTAAGCAAAAACTCTCAAAATCTCTTATATTGTGGGACGGA



gi|163922771|gb|EG712217.1|EG712217 Os5MPREST3658 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-N4C11SA, mRNA

TTGCTTGTAACGTTTGACCAC
|||||||.|||.||||| |||
AACGAACGTTGTAAACTAGTG

EST sequence (targeted fragment marked with yellow):
ACCGATCATCATATTTGCAAACCACCGAATCAGTGGTGTACACAAATAAAAGGTGACTAATGTAGTAATATTTATAATAATGATGATATAATCTGCTGGTTCAAACATGAAAAAGACCTGATTATGGACATTGTCTTTCCGTTCTTTACATGGTACATATATTACTCAACTCACAAAAGACTAATGCTCTGTGCAGATTATAAAAGCTCTTCTGGAGGAAGAACAATTAATTATTCTTGATGAGTTAGTGCGTCTGAACAATCTTAACATCGACGTACATTTATGATAGTAATTCCTACTCCCTCCGTCCCATAATATAAAGGATTTTAAGTTTTTGCCTACAACATTTGACCACTCGTCTTATTCAAAAAATTTTAAAATTATTAATTATTTTATTTGTGACTTACTTTATTATCTACAGTATTTTAAGCACAACTTTCCGTTTTTTGTATTTACAAAAAAAATTTGAATAGGACGAGTGATCAAATGTTGCAAGCAAAAATTGAAAATCCCTTATATTTCGGGACGTAGGGAGTATGTTGCAGATAACT



gi|88722981|gb|CI746491.1|CI746491 CI746491 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TTGCTTGTAACGTTTGACCAC
||||||..|||||||||| ||
AACGAATGTTGCAAACTGATG

EST sequence (targeted fragment marked with yellow):
TTTGTGATTATTTTTCTAGGAGAGGTGGCTGGGGACTTCCTTTCCTTATTGCCACAGAGTAGACACATATGACCCACTACTCCCTCCGTCCCATAATATAAAGGATTTTGAGTTTTTGTTTACAACGTTTGACCACTCGTCTTATTCAAAAAATTTTAGAATTATTATTTATTTTATTTGTGACTTACTTTATTATCCACAGTACTTTAAGCACAACTTTTCATTTTTATATTTGCAAAAAAAAAATTGAATAAGATGAGTAGTCAAACGTTGTAAGCAAAAACTCAAAATTCTCCTTATATTGTGGGACGGAGGGAGTACCATTTTCAATGCAAGAGGAAAACCACTGACCTTCGCATTGTTGATTAGTGAAGAAACTTAATGGGTCTACTAT



gi|88573944|gb|CI665713.1|CI665713 CI665713 Oryza sativa (japonica cultivar-group) callus suspension-cultured cells treated with

TTGCTTGTAACGTTTGACCAC
|||||.||||| ||||| ||
AACGAGCATTGGAAACTATTG

EST sequence (targeted fragment marked with yellow):
GGAGGGCTGTGATTCTCGCGTCCGCTGCCTATTTCTGCCTCCGCCACGCCCACGCCCACGCCCACGCCCACGCGAGCGCGTTTGCACTTTCCCCCGTGTTTTGTGCACAGTACACTACCCAGCCTGCCGCTCGATCGATCTGGCCTTCTCCGCCGCACCGCCGCGCGGCGCCCCGACCGTCGTGCGGCCGCAGGAGGATGCAGGCACCCTTCCTTTCGCCGCTTTTCTCCTCTGGAAGAAGGGCTCTCCCATAGACAACGGCTAAGAATTACAAGGCTGCTTCTTTCGGGAGTAGTTTTTCTGTTAATTTTACAAGGGAAATAGGTGAGATTTCTGAGGTGTAAAAAGAGAATTAGTACTGCTGTGGCTGGGGAAGATGACCAAGATCAGCTGCTTCTCCTGCTCTTCTCGCCGGCAAGAGGAAGTTATCAAAGGTTACGAGCAAGATTGGTTACGGG



gi|58607564|gb|CK035597.1|CK035597 35670rsiceg_4102.y1 Oryza sativa cv. 93-11 tillering whole plant cDNA library Oryza sativa cD

TTGCTTGTAACGTTTGACCAC
|||||.||||| ||||| ||
AACGAGCATTGGAAACTATTG

EST sequence (targeted fragment marked with yellow):
GCACGAGGGCACAGTACACTACCCAGCCTGCCGCTCGATCGATCTGGCCTTCTCCGCCGCACCGCCGCGCGGCGCCCCGACCGTCGTGCGGCCGCAGGAGGATGCAGGCACCCTTCCTTTCGCCGCTTTTCTCCTCTGGAAGAAGGGCTCTCCCATAGACAACGGCTAAGAATTACAAGGCTGCTTCTTTCGGGAGTAGTTTTTCTGTTAATTTTACAAGGGAAATAGGTGAGATTTCTGAGGTGTAAAAAGAGAATTAGTAGTGCTGTGGCTGGGGAAGATGACCAAGATCAGCTGCTTCTCTGCTCTTCTCGCCGGCAAGAGGAAGTTATCAAAGGTTACGAGCAAGATTGGTTACGGCAAGAAGTCTGGTGGCAATGAGTTCCAGAAGGTGAAACCGGTGGAGTTCATGGAGGGGACGGACACCGTCGACATCGGGAAAGGCGGTGGTGACATTGTCCTGGCATGTGACACAAAGGTTGTCGCTTTCAACGCCGCTGAGTTGGCTTGTGA



gi|87016396|gb|CI273606.1|CI273606 CI273606 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

TTGCTTGTAACGTTTGACCAC
||||||||||||||| |||
AACGAACATTGCAAAATGG

EST sequence (targeted fragment marked with yellow):
GGTAAAACGTTACAAGCAAAACTCAAAATCTCTTGTATTATGGGAGGGAGGGAGTAGCATGCAACAGGCGGCACTAGTGCACGTTGTCCTACCGAGCCTTGCCACCGGAGAGGAGGACGTCGGCGACCAGCGCGTCGAGGCTGGCGTGCGCGCGGCCGCCGGGGCGCGTCGCGCGGAGGCCGGTCTCCTTCCACTCGCCCGCCCGGCGGCGCATCTCCCGGCCCTTGTCTCCTCCCATCGCCTCCCGTATCTTGGCCTCCACCGCGTCGCGCCGCACGTCGTCGTCGATCTCCATGGCGACGCCCCACTCGGTGCAGCTGTACCGGCGGTTGGTCTGCTGCTCCGCGAAGAACGGCCAGCACAGCATCGGCACCCCGCCGCAGAGGCTCTCCACCGTCGAGTTCCAGCCGGAGTGCGTCAGGAACACGCCCACCGCCTCGTGCCGCAGCACCGCCTCCTGCGGGCACCAGCTCGCCAGCAGGCCGCGCCCCCCGACGGACTCCATGAACTCCGGCGGCAGCACGGCGGCATCGCCGTGGATGAGGTCGGGGCGGACGATCCACAGGAAGTCGTGGCCGCTGTTGGCGAGCCCCCACGCGAACTCAACCAGCTCCTCGTTCGTCATCACCGTGACGCTGCCGTAGTTAACGAACACCACCGACCGGGGCGGCTTGCCGTCGAGCCAGCCGAAGCAGGAGTC



gi|86491098|gb|CI133731.1|CI133731 CI133731 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two

TTGCTTGTAACGTTTGACCAC
|||||||||||.|||| | |
AACGAACATTGTAAACAGTTC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTAGTACTGAACGTCTCAACGAATTGAATTCAATTTTATTTCTTGACAAATGTTACAAGCAAATCCATATTTACAATTTGTAGGCTACTAGGCACACACCTACCAAAAGAATCGCCGCCGTCGTCGTCACGATTCCGCCGCCGTCGCCGCCGCCGCATCCACCGCGTTCTGGTCAATGAAGTTGACCAGCGCGAGGCCGGCGGCCCAGACGTCGTCGTCCATCACGGACTCCTCCGGCGAGTGGCTCACGCCGCCGCGGCACCGCACGAACAGCATCCCCACCTTCGTCAGCCTCGCCATCGCCATCGCGTCGTGCCCCGCTCCGCTCATCAGCACCGGCGTCTCGCCGCCGGCCCGGCGCACGCCCGCCGCCATCGACGAGATCGTCGACCGCGTCGCGCGCTCCAGCCGCGACGT



gi|88208548|gb|CI208397.1|CI208397 CI208397 Oryza sativa (japonica cultivar-group) same as Lib 33(supermix) Oryza sativa Japonic

TTGCTTGTAACGTTTGACCAC
|||||||.|||||||||||||
AACGAACGTTGCAAACTGGTG

EST sequence (targeted fragment marked with yellow):
ATTTATAACTTACTTTATTATCTACAGTACTTTAAGCACAACTTTTCGTTTTTTATATTTACAAAAAAAATATAACTAAGACGAGTGGTCAAACGTTGCAAGCAAAAACTCAAAATTCCTTATACTGTGGGACGGAGGGAGTAATAATCTAGTACAGTAGTAATAACACTGTTATTGTCATCTCTCCTAGCTCCGGCGAGCCTCGTCTCCACGGCGGCCGGCGGCTATCCGGTCACAGATTCCTGAGGATCTGGACGATCTGGTCGAGCTTGTCCAGGTTCTTCTTCCGATCCCGCTCGCGATCCTCCTCCCGGCTCACCATCTCGGCGACCTGCTTCTCCCGCTCCTCGCCGCGCCGCTCCAGCTCGACGAGGCGCCGCCGCCGCTGCTGCTCTTCGTCGTACGCCTGGATCGATATGCCGATGCACAAGCCGGCGAAGAAGCAGACGAAATTCGCCG



gi|88267672|gb|CI379607.1|CI379607 CI379607 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGCTTGTAACGTTTGACCAC
||||.|||||||.|| ||| |
AACGGACATTGCGAAATGGCG

EST sequence (targeted fragment marked with yellow):
AGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGTCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTAAAAGAATTGTTTCTCCAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGCATGAGGACACCGGAGGCCGTGCCGTCGGCGTGTTGGCAGGTCGCCTCCGCCGGCTTGCCGCCGTCGAATGTGAGCTTGAT



gi|58659657|gb|CK048337.1|CK048337 43246rsiceh_10768.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

TTGCTTGTAACGTTTGACCAC
|||||||.||||||||| |||
AACGAACGTTGCAAACTAGTG

EST sequence (targeted fragment marked with yellow):
GCACGAGGCTCCAATCATCATACGACTAGAGCTAACTAGCATAGTACTCCCTCCATCCTACAGTATAGAGGGATTTTGAGAGTTTTTGCTTACAACGTTTACCACTCGTCTTATTTAATTTTTTTTCGCAAATATAAAAAACGAAAAGTTGTGCTTAAAGTACTATAGATAATAAAATAAGTCACAAATAAAATAAATAATAATTTCAAAATTTTTGTAATAAAACGAGTGATCAAACGTTGCAAGCAAAAACTTAAAATCTCTTATATTATGGGACGGAGGGAGTTCCATTCAATTCTCCAAAAGAACACTTATTATTGGATATATCACCGTCAATACCCTGAACAACCTACGGAAGCCATGTATTTCTCATCTGTTGATCTGCATCCATCACCCACCTTCCAAAATAACCAATATATCACCATACAAAAGAACACCTAACACTGATGCTACTGCCAATGCCATTCCTAATTCTAGCCTAACACCTACCTAGCACTAATAATAGTAGCAGTAATAATTCTTAAATATGATCCATTAAACTGGGATT



gi|88263696|gb|CI366597.1|CI366597 CI366597 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGCTTGTAACGTTTGACCAC
||||.|||||||.|| ||| |
AACGGACATTGCGAAATGGCG

EST sequence (targeted fragment marked with yellow):
GATTGTCATTCCCTAGTTGATTTATTGAATAATAATGCTGAACCTTCTTGATTCGGGAATACAATTGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGTCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGCATGAGGACACCGGAGGCCCGTGCCGTAGGCGTGTTGGCCGGTCGCCTCCG



gi|88473713|gb|CI410984.1|CI410984 CI410984 Oryza sativa (japonica cultivar-group) leaf of seedling 10mM H2O2 (10min), 24hr afte

TTGCTTGTAACGTTTGACCAC
||||||||||||||| ||||
AACGAACATTGCAAAATGGTA

EST sequence (targeted fragment marked with yellow):
AGGGGGTAATTTGTACTTTTTCCTAAAATAAATAATAATTTTAAAAAATTTTGAATAAGACGAATGGTAAAACGTTACAAGCAAAAACTCAAAATCTCTTGTATTATGGGAGGGAGGGAGTAGCATGCAACAGGCGGCACTAGTGCACGTTGTCCTACCGAGCCTTGCCACCGGAGAGGAGGACGTCGGCGACCAGCGCGTCGAGGCTGGCGTGCGCGCGGCCGCCGGGGCGCGTNGCGCGGAGGCCGGTCTCCTTCCACTCGCCCGCCCGGCGGCGCATCTCCCGGCCCTTGTCTCCTCCCATCGCCTCCCGTATTTTGGCCTCCACCGCGTTGCGCCGCACGTCGTCGTCGATCTCCATGGCGACGCCCCACTCGGTGCAGCTGTACCGGNGGTTGGTCTGCTGCTCCGCGAAGAACGGCCAC



gi|86883913|gb|CI309171.1|CI309171 CI309171 Oryza sativa (japonica cultivar-group) BAP treated callus Oryza sativa Japonica Grou

TTGCTTGTAACGTTTGACCAC
||||||.||||.|||||||||
AACGAATATTGTAAACTGGTG

EST sequence (targeted fragment marked with yellow):
TTTCTTGTACTCCATACGTCTCATAATATAATTTTGAGTTTTTACTTTGTAATGTTTGACCACTCGTCTTATTCAAATTTTTCTTTATAAATATAAAAAACGAAAAGTTGTGCTTAAAGTACGTAGATAACAAATTAAGTCACAAATAAAATAAATAATAATTTTAAAATTTTTTGAATAAGACGAGTGGTCAAATGTTATAAGCAAAAACTCAAAATCTCTTATATTATGGAACGGAGGGAGTAGTATTCAATTCAGATCAGTTGATTTGAGCCGCCGTCGACGATCCGGCCGGCCGCTTGCTTCTTCCATATTGATCGAGGAGACATCACATGGATCATCATCCAATTCCAGCAGATGAGAATGAGATGACTAGTACTAGTCCCCAGATGCAGATAAGGAGAAACAAGCTCTCCTCCCACTTCCAAGGAGATATCGATGATAATAGTGGTGTTGGTGTTGTGGACATCCGGG



gi|88273181|gb|CI388637.1|CI388637 CI388637 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGCTTGTAACGTTTGACCAC
||||.|||||||.|| ||| |
AACGGACATTGCGAAATGGCG

EST sequence (targeted fragment marked with yellow):
CGATTGTCATTCCCTAGTTGATTTATTGAATAATAATGCTGAACCTTCTTGATTCGGGAATACAATTGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGTCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGCATGAGGACACCGGAGGCCG



gi|89183217|gb|CI045782.1|CI045782 CI045782 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGCTTGTAACGTTTGACCAC
||.||||.|||.|||||||||
AATGAACGTTGTAAACTGGTG

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTGCTGAAATCTAATCCCTCCGTCCTATAATATAAGGAATTTGAGTTTTGGTTGTATCGTTGATCACTCGTCTTATTTAATTTTTTTATAAATATAAAAAATAAAAAGTTATGCTTAAAGTACTGTATATAATAAAAAATAAATAATAATTTTAAAAAAATTTAAATAAGACGAGTGGTCAAATGTTGCAAGTAAAAACTCAAAATCCCTTATATTATGGGACGGAGGGAGTAGTTATCTACCAATCAAATCAAATGTATTCTCATACTACTATCCTCATCCTAAATAAGCCTAAAAAATAGAAAGGAAAACAAAAAACAAAAACGCCAAGAATCCACCAACTCGTCTCTGTGTCTCTCTTTCTGTACTTTTCTTTCTTCATTCATGCCGTGATCGATGATAGCAGCAGAGTGCAACCTCACCTCCTCCTCGCCGGCTGCGGCGCGACGTCGACCCTCTTCCCCTTGCCGGAGGCGGCGGCGGCGGCGGCGGGGG



gi|163923593|gb|EG711534.1|EG711534 Os5MPREST3042 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-I4B10S, mRNA s

TTGCTTGTAACGTTTGACCAC
|| ||||||||.||||| ||
AAAGAACATTGTAAACTTGTT

EST sequence (targeted fragment marked with yellow):
TAGTAACTGCAAAATTTCTGTAGGTATGGAGTCATTGGAAATTAGCTTTGCAAGAGTAGCACTCTGTAAGGGTCTTGCATGCGTCATAAGTGAGCAGGTTAATTAGGCTCAACCTGTTCCACTGTTGCACAGCATTTGTTCTTGTTGTTAATTAAGTATAATACTTCCTTAGGCATGCATCGAGATACCAGCTTGTTCAAATGTTACAAGAAAAGTGACTTGTTCACTTCCGATCGACATACTTCACATGTAATTACTGATGTTCTTGTTGAAGACCTTAACTGCTTAATTTGTTCTGGAAGTAATAATACCTAAAATCCAAACCGTAGAGCCAAAGCCAATAGCATGACAGTTTGCTACTCAGCATTAATCATG



gi|86536709|gb|CI176915.1|CI176915 CI176915 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

TTGCTTGTAACGTTTGACCAC
|||||||||||.|||| | |
AACGAACATTGTAAACAGTTC

EST sequence (targeted fragment marked with yellow):
TCAACGAACTGAATTCAATTTTATTTCTTGACAAATGTTACAAGCAAATCCATATTTACAATTTGTAGGCTACTAGGCACACACCTACCAAAAGAATCGCCGCCGTCGTCGTCACGATTCCGCCGCCGTCGCCGCCGCCGCATCCACCGCGTTCTGGTCAATGAAGTTGACCAGCGCGAGGCCGGCGGCCCAGACGTCGTCGTCCATCACGGACTCCTCCGGCGAGTGGCTCACGCCGCCGCGGCACCGCACGAACAGCATCCCCACCTTCGTCAGCCTCGCCATCGCCATCGCGTCGTGCCCCGCTCCGCTCATCAGCACCGGCGTCTCGCCGCCGGCCCGGCGCACGCCCGCCGCCATCGACGAGATCGTCGACCGCGTCGCGCGCTCCAGCCGCGACGTCAGCTCCGCGTCGCACGGCGTCGCCGCCGCCGCGTGCTTCTGCTCGACGGCGCAGTCGACCAATCTGTCGTCGCATCTCTGAAGAACAAGCCTCGAGA



gi|29662914|gb|CB659189.1|CB659189 OSJNEc15P09.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc15P09 3', mRNA sequence

TTGCTTGTAACGTTTGACCAC
|||||||.||| .||.|||||
AACGAACGTTG-GAATTGGTG

EST sequence (targeted fragment marked with yellow):
CTGGCTTGGTATTGCAGCTGTTGCTGGGTCAATCAATGTTCTTCTTACCAATCCAATATGGGTTCTCGTGACTCGTATGCAGACACATACACAAGCAGAAAAGAAGATCATGGAGTCTAAAAAGGAGCTTTTGCTGAAGGATGTTGCTAGGGCCAATTCAATAGAGGTCTCAATTCTTAAGGACAGGTTGTATAAACTTGATTCTGAAAAGCCTCGTCCATATGGGACAATTCAAGCGGTCCGGGAGGTCTACCGTGAATCAGGCATAAGAGGATTCTGGAAAGGACTTATTCCAACACTAATTATGGTATGTAATCCATCAATTCAATTTATGATCTATGAAACATTGGCAAAGCGTCTCCGGTCAAAGAGATCTGGAAAGGAACTCCCAAAAAAGAACCTTACTGCTATGGAGGTATTCTTATTAGGTGCAATAGCAAAGCTCGGAGCTACTGTTGTGACATACCCATTGCTAGTGGTTAAGGTTGCAAGCAAAACAAGAAATTGGCAGGAATGTGATGTCCAGATACACAGGTACGATTGACGCGATCATAAAGATGATCCGGTATGAAGGATTGCACGGGTTTTACAAAGGAATGGGTACGAAGATTGTACAGAGCGTCTTTGCCGCCTCAGTTCTTTTTATGGTAAAAGAAGAGTTGGTAAAATTCGTAGTTATGTTAATTGCTAGGAGTAGGACTGTGCTCGGTCCTAGCTCTAAGAAACGATAGGCAGTTTATATATATCGAAACAATTTGCAACGACCTCGGCGAGACTATATATCGATTATTTACAAGATAGCCAAAAAAGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTGTC



gi|86494296|gb|CI136929.1|CI136929 CI136929 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ

TTGCTTGTAACGTTTGACCAC
||||.|||||||.|| ||| |
AACGGACATTGCGAAATGGCG

EST sequence (targeted fragment marked with yellow):
AATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTCTCCAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGCATGAGGACACCGGAGGCCGTGCCGTCGGCGTGTTGGCAGGTCGCCTCCGCCGGCTTGCCGCCGTCGAACGTGAGCTTGATGTCCTGCAGGCCGAGCCCGCTGCAGGGTTTGCTCGCGCCGCAGTCGAACTTGACCGCCACCTGCGACGCCGACGAACCCTGGATGTCGGTGTACGTCACCCCGCTGATCTGCACGTCGGAGCTCTGATGGGGGCAGCCTTGGCCGCCGTCGTTGGGGCAGTAGCTCTGGTCGATGATGATGGGGTTGCTCACGTCGCGCATGAGCGCGTGCTCGAAGACGACGCCGCGCACGTACGCCCCCGAGCGCGCCGCCCGCCCCCACGTCTTGATCCGCAGCCCGTTCTCCGTGCCCACGAACGCCGCGCCGCTCACCGTCACGTTCTCCACCCCGCCCTCCTCGCTCTCCTTCCCCAGGCTCCCGATGCTTATGCCGTGGCCGGGGCCGCAGCTGACGTGCTCGACGCGGAGGTTGGAGGTGCCGGGGCCGACGGAGATGCAGTCGTCGCCGGTCTGGATGCTG



gi|87041779|gb|CI196401.1|CI196401 CI196401 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group

TTGCTTGTAACGTTTGACCAC
||| |||||||||||||||||
AACAAACATTGCAAACTGGTG

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTGCAGCAAACTGAAACATGTCGCTAAAGTTGCAGCAAACTGATACATTTATCACTAAAGTTACAGTTTTCTGAAATTTACTCAATGGAAAAAGAAGAGATGGTACTGATGGGCTGGGCCTAAAATGGGGGAAATAACAGGAGTACTGATGGGCTGGGCCCCTCGCCACCTCGTGCCATGCTAGGCCTTAAATTTTAGTAGCCCTAGCCCTTCAACGCTCTCTGAACTCTACTCTGAACTGAACACGAGCAATTGACACACGTTCGACTACACGAGTTGCTAATTGCTAGTACTTTGCTACTATTACTTTGCTAGTAGCATCTTACTGTTTGCAGTTGCGAATTTGCAATATTAGACAGTACAAGATTCGATACAAGTTCTGGCTCAGGTGGTCAGTTTTGACTATCAGGCTTGATTCGTTTAATCCCTCTCATGGGATTGATGGGATTTGAAGGGATTTACTCCCTTCGTCCCATAATATAAGGGATTTTAAGTTTTTGTTTGTAACGTTTGACCACTCATCTTATTTAAAATTTTAAATAAGGCGAGTGGTCAAACGTTACAAACAAAAAATCAAAATTCCTTATATTGTGGGACGGAGGGAGTATTTCATATGTATTGTGATGTGAAATTACTTCCTTTCAGTT



gi|86498515|gb|CI141148.1|CI141148 CI141148 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

TTGCTTGTAACGTTTGACCAC
||||.|||||||.|| ||| |
AACGGACATTGCGAAATGGCG

EST sequence (targeted fragment marked with yellow):
GATTGTCATTCCCTGTTGATTTATTGAATAATAATGCTGAACCTTCTTGATTCGGGAATACAATGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGTCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGCATGAGGACACCGGAGG



gi|88996855|gb|CI389521.1|CI389521 CI389521 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGCTTGTAACGTTTGACCAC
||||.|||||||.|| ||| |
AACGGACATTGCGAAATGGCG

EST sequence (targeted fragment marked with yellow):
GGTTGTCATTCCCTAGTTGATTTATTGAATAATAATGCTGAACCTTCTTGATTCGGGAATACAATTGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGTCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGC



gi|88692803|gb|CI736378.1|CI736378 CI736378 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TTGCTTGTAACGTTTGACCAC
||.||||.|||||||||||||
AATGAACGTTGCAAACTGGTG

EST sequence (targeted fragment marked with yellow):
ATGGTGATTCTCGCACTTATGTCGATACTCCCTCCGTCCCACAATATAAGGGATTTTTTGAGTTTTTGATTGCAACTTTTGATCACTCGTCTTATTCAAATTTTTTTTGTAAATATAAAAAACGAAAAGTTGTGCTTAAAGTACTGTAGATAATAAAGTAAGTCACAAATAAAATAAATAATAATTTCAAATAAATTTGAATAAGACGAGTGGTCAAACGTTGCAAGTAAAAATTCAAAATCCATTATATTATGGGACGGAGGGAGTATTTTTCTATAGGAAAGGTCCAACTTATACGACCTTACACACTTGTGGTTGTAGGAAAATCAATGCTAAACTACATAACTGAATATTTTACAGCCTTAGACCCATAAAA



gi|86486813|gb|CI129446.1|CI129446 CI129446 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two

TTGCTTGTAACGTTTGACCAC
|||||||| ||.|||| |||
AACGAACAATGTAAACAGGTT

EST sequence (targeted fragment marked with yellow):
GAACGTCTCAACGAATTGAATTCAATTTTATTTCTTGGACAAATGTAACAAGCAAATCCATATTTACAATTTGTAGGCTACTAGGCACACACCTACCAAAAGAATCGCCGCCGTCGTCGTCACGATTCCGCCGCCGTCGCCGCCGCCGCATCCACCGCGTTCTGGTCAATGAAGTTGACCAGCGCGAGGCCGGCGGCCCAGACGTCGTCGTCCATCACGGACTCCTCCGGCGAGTGGCTCACGCCGCCGCGGCACCGCACGAACAGCATCCCCACCTTCGTCAGCCTCGCCATCGCCATCGCGTCGTGCCCCGCTCCGCTCATCAGCACCGGCGTCTCGCCGCCGGCCCGGCGCACGCCCGCCGCCATCGACGAGATCGTCGACCGCGTCGCGCGCTCCAGCCGCGACGTCCGCTCCGCGTCGCACGGCGTCGCCGCCGCCGCGTGCTTCTGCTCGACGG



gi|89188558|gb|CI115807.1|CI115807 CI115807 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

TTGCTTGTAACGTTTGACCAC
|||||||| ||.|||| |||
AACGAACAATGTAAACAGGTC

EST sequence (targeted fragment marked with yellow):
TATTTTTTATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTTTTTTTTTTTCTCAACGAATTGAATTCAATTTTATTTCTGGACAAATGTAACAAGCAAATCCATATTTACAATTGGTAGGCTACTAGGCACACACCTACCAAAAGAATCGCCGCCGTCGTCGTCACGATTCCGCCGCCGTCGCCGCCGCCGCATCCACCGGGTTCGGGTCAATGAAGTTGACCAGCGCGAGGCCGGCGGCCCAGAAGTCGTCGTCCATCACGGACTCCTCCGGCGAGTGGCTCACGCCGCCGCGGCACCGCACGAACAGCATCCCCACCTTCGTCAGCCTCGCCATCGCCATCGCGTCGTGCCCCGCTCCGATCATCAGCACCGGGGTCTCGCCGCCGGCCCGGCGCACGCCCGCC



gi|89187619|gb|CI115065.1|CI115065 CI115065 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati

TTGCTTGTAACGTTTGACCAC
|||||||||||||||||||||
AACGAACATTGCAAACTGGTG

EST sequence (targeted fragment marked with yellow):
TTAAAACTGTCGCAAAGCGCAATGACATGTAACACTGATAAAACGACATCACAATATGTTAGCAAGAGATATCAACATGGCAAAATTGGAAGATAAAACTACTGCTTATTTTCTTGTTTGCTCATGTCATGAAGGACCTAAATATCTACTCCCTCTGTCCCACAATATAAGGTATTTTGATTTTTTACATGTAACGTTTGATCACTAGTCTTATTCAAATTTTTTTTGCAAATATAAAAAATGAAAAGTTATGCTTAAAGTATTTTAGATAATAAAGTAAGTCACAAATAAAATAATTAATAATTTCAAAAAAATTTGAATAAGACGAGTGGTCAAACGTTACAAGCAAAAACTTAAAATCCCTTATATTATGATACGGAGGGAGTACATGATCACAGCCCTTATTGAGATTATAGAAGGCCAAGGCACTGCATCAGGTGTAACTACAAGCACTCTGGATAAACCTAATCGGCTTGGAGCTACCGGAATCGATAACC



gi|89174219|gb|CI042112.1|CI042112 CI042112 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGCTTGTAACGTTTGACCAC
||||.|||||||.|| ||| |
AACGGACATTGCGAAATGGCG

EST sequence (targeted fragment marked with yellow):
TATTGAATATATGCTGAACCTTCTTGATTCGGGAATACAATTGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGTCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGCATGAGGACACCGGAGGCCGTGCCGTCGGCGTGTTGGCAGGTCGCCTCCGCCGGCTTGCCGCCGTCGAACGTGAGCTTGATGTCCTGCAGGC



gi|88266207|gb|CI377109.1|CI377109 CI377109 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGCTTGTAACGTTTGACCAC
||||.|||||||.|| ||| |
AACGGACATTGCGAAATGGCG

EST sequence (targeted fragment marked with yellow):
GATTGTCATTCCCTATTTGATTTATTGAATAATAATGCTGAACCTTCTTGATTCGGGAATACAATTGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGTCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGCATGAGGACA



gi|88833059|gb|CI369949.1|CI369949 CI369949 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGCTTGTAACGTTTGACCAC
||||.|||||||.|| ||| |
AACGGACATTGCGAAATGGCG

EST sequence (targeted fragment marked with yellow):
GTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCAAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGCATGAGGACACCGGAGGCCGTGCCGTCGGCGTGTTGGCAGGTCGCCTCCGCCGGCTTGCCGCCGTCGAACGTGAGCTTGATGTCCTGCAGGCCGAGCCCGCTGCAGGGTTTGCTCGCGCTGCAGTCGAACTTGACCGCCAACTGCGACGCCGACGAACCCTGGATGTCGGTGTACGTCACCCCGCTGATCTGCACGTCGGAGCTCTGATGGGGGCAGACTTGGCCGACGTCGTTGGGGCAGTAGCTCTGGTCGATGATGATGGGGTTGCTCACGTCGCGCATGAGCGCGTGCTCGAAGACGAAGCCGCGCAG



gi|58692951|gb|CK081638.1|CK081638 81321rsicen_7895.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic

TTGCTTGTAACGTTTGACCAC
|||||.|.||||.|||||||
AACGAGCGTTGCGAACTGGTT

EST sequence (targeted fragment marked with yellow):
CCGGGCTGCAGGCTTCCTCCACTTGCCCATGAATCTTCTCCTTGCAGCAATGCGCACTCAGCGGTGCCCTGACTGAAGGAACTAACTATAATTAAAATGACAGGATCATCGTGTGGTTGGGATTTCCTGCAGTACCTTGATGCACTAGAGTACTTCAATATTTTTGGCAGCAATGACCTAACACAATTACCTGAGAGCATGCGAAGCCTCACCACCCTCCACAAGCTAATCATCCACGACTGTCCCACCTTTGGCATGCTGCCAGAATGGCTTGGAGAACTGTGTTCTTTACGGTCCCTGTTTATCAAGGGGACCCCAATGATGGACAGTCTCCCTCAATCGATTGGCTGCCTTACGTCCCTCACGCACTTGACTATTGCATGCGATAATTTGAAACAGCTGCCTGAGACGTTTCACCACCTCACCTCCCTTCGAGAACTCGACTTGGCAGGATGTGGTGCCCTGACTGCACTGCCAGAAAACATCGGGAAACTCTCTGCACTTGAAGCACTATATGTCGGACCGTGCTCTGCCATTCAATGGCTGCCCGAGTCCATAAAACACCTTACTAATCTCCGGCGATTGAACATTTCTGGTTGCCCTAATTTGGTCAAGCGTTGCGAGCAAGAAGTGGGGGAAGACTGGCAGCTTGTCTCTCATATTCCTAATTTAATAAGTGAC



gi|88270755|gb|CI386013.1|CI386013 CI386013 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGCTTGTAACGTTTGACCAC
||||.|||||||.|| ||| |
AACGGACATTGCGAAATGGCG

EST sequence (targeted fragment marked with yellow):
ATTGAATAATAATGCTGAACCTTCTTGATTCGGGAATACAATTGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGTCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGCATGAGGACACGGAGGCCGTGCC



gi|88247385|gb|CI247234.1|CI247234 CI247234 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat

TTGCTTGTAACGTTTGACCAC
|||||||||||||||.|||||
AACGAACATTGCAAATTGGTG

EST sequence (targeted fragment marked with yellow):
GGCCTTTTTTTTTTTTATTTTTTTTTTAATTTCAAAAAAAATTGAATAAGACGAGTGGTTAAACGTTACAAGCAAAAACTCAAAATCCCTTGTAACAGGGGACGGAGGGAGTAATTAATGTAGTTACACCTACGCTGCATCGATGATCACTGTAGTCTGTATCCTAACAGTGTCTAAACTCTGAAGAAAACCTCGCCATGGAGCTCTTTTCTGCAATCCTCGGTGACCTCACTAGCAGGTCCATCTCCTACGTCATGGACAGATACTGCAGCAACCAGCCGGCGGCGATCGACGACGGCGTACGGCAGCTGCGCCGGCTGCTTCTACGGACACACACCATCGTCGAGGAGGCAGAAGGGAGGCATATCACCAACCAAGGGATGCTCCCGCAGCTCAAGGCCATGAGAGACGAGCTGTTCAGAGGCCACTACGTCCTCGACACCTTCAGACACCGGGCTGATCTCCTCCAGAAAGAGGAGGAGAAAGAAGATGAACAGGTGAGAAGCTCGTTTGCAATGTCAAGGCTCAATCCTGCCAAGCGAATCCGTTTCTCTCGTGCTAGAACTAGTAGCT



gi|117252035|gb|CT844274.1|CT844274 CT844274 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TTGCTTGTAACGTTTGACCAC
||||||..||||||| |||||
AACGAATGTTGCAAA-TGGTG

EST sequence (targeted fragment marked with yellow):
TAAGAATTATTACTGCTACTATTATTAGTGCTAGGTAGGTGTTAGGCTAGAATTAGGAATGGCATTGGCAGTAGCATCAGTGTTAGGTGTTCTTTTGTATGGTGATATATTGGTTATTTTGGAAGGTGGGTGATGGATGCAGATCAACAGATGAGAAATACATGGCTTCCGTAGGTTGTTCAGGGTATTGACGGTGATATATCCAATAATAAGTGTTCTTTTGGAGAATTGAATGGAACTCCCTCCGTCCCATAATATAAGAGATTTTAAGTTTTTGCTTGCAACGTTTGATCACTCGTTTTATTAAAAAAATTTTGAAATTATTATTTATTTTATTTGTGACTTATTTTATTATCTATAGTACTTTAAGCACAACTTTTCGTTTTTTATATTTGCGAAAAAAAAATTAAATAAGACGAGTGGTAAACGTTGTAAGCAAAAACTCTCAAAATCCCTTATACTGTAGGATGGAGGGAGTACTATGCTAGTTAGCTCTAGTCGTATGATGATTGGAAGAAATCATCAGATGTTTGAAAAGTTGTAAGAAAGAAATAATAAGAGCTTCAGATTTCCTTTAAAAAAAAAAAAAAAAAAAAGGCCAGCTTGGCCTCGAGGGGGGGCCCGGTAC



gi|88989487|gb|CI043918.1|CI043918 CI043918 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGCTTGTAACGTTTGACCAC
||||.|||||||.|| ||| |
AACGGACATTGCGAAATGGCG

EST sequence (targeted fragment marked with yellow):
TGATTTGGTCATTCCTAGTTGATTTATTGAATAATAATGCTGAACCTTCTGATTCGGGAATACAATGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGTCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTTATTTGACGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGCATGAGGACACCGGAGGC