| mature miRNA: TTGGACTGAAGGGAGCTCCT species: Phaseolus vulgaris database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|171516439|gb|FE694152.1|FE694152 Pv017B_M13R_A10.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA seque TTGGACTGAAGGGAGCTCCT EST sequence (targeted fragment marked with yellow): AGATGCTCAACCAGAATCTCTCAATCGCACGGGATCCACACCAAGAGCATCCATTGAATGGGCACGGCGTTCCCTTAAGTCCAAGAACTCAGAAAGTTTTACTTGAGTATCAAGAAACCATGATCCCTCTTCATTTTATTCATATATACATATAGCAGTGTTGTGTGTTATAAATTTTTTGTACAAGGGAAAGGGAAGGAAAATGTTTCTCAATCCATTATGCCCTTTTGTTTCACCTGTTTACATATTTGAACATTTTCCATTTCTTTCCCTTGTGTAAAGTTGGCTGTAAACTTATGTAGGCAATTTCACAAATTGTCCTGTTTGTTAGGGGAGTAGCTCCTGTATTTTACTATCCCTATAGATTTATTCTTCATTTGAAACAGTGGAAGATGTTGTTTTAGACCATTTGTGTAGAACATTATTGTCATCGGAGAAAGAATCTTCTATGTTCCCCCTACTGCAGATGCAAAGCTGATGCACAAAGGTTGGAGAACTAAAAATGTAACTCACAATGTTGTGCTTATAGCAGAGCTTCTTTTGTAGATGACAAATATTGTATAGTTGTGAGGACTGTAATTTCTTTAC | |||||||||
gi|187435453|gb|FG233534.1|FG233534 pvrebbc010002_C8_M13rev_phred13_vc root hairs of Phaseolus vulgaris harvested 24 hours after TTGGACTGAAGGGAGCTCCT EST sequence (targeted fragment marked with yellow): AATCTTCCCTCAATTTAAAGGGCCCCCCTTTAAGAAACACCGACAAAATTAAGATTTAAGATTAAACTAAACTTGTATCTTGAAAATTTTCCAAGCTTCATAACAACTACTTAAGCATCCACAAAGCTGAAAAAAGTTGATGCTACAATATGTATTCAAGGGCACAACCATCTGTTTTCTGAATCAGATAACACCGCACAATAAACTGTCAAATGCTATAAAATACTGGACAGGGGGATTAATCCTCTTCTTTTTCCGGAGGCAAACCACAAGGCAGGAGCATTTTCTGCATAAAGTTATAGCGTTCCCTTCCAATAGATTCATTTTCAGCAATACCAACGTAAGCCAGTAAAGGGTAGTGGCCCATATATGAAGCATAGCTATCACGTTGAATGGTCACTGCCCACTCAAATCTGTTCAAATCGGCATGACCAGTTCCAACATATTTGGCTTGAAGATGTTCCAGCTGAGAGTTGATGTTAAACCTATCACTCCCCTGCATGGTGTGAGATTGAGTTGCTATGAATCAAAGTACTCTCCCAGATGCTTAGGGTTTTCCTTCAGTTCAGGTTCAAATGCTCTCC | |||||||||
gi|62716202|gb|CV542798.1|CV542798 RTS_125_E11 Phaseolus vulgaris P- root EST library Phaseolus vulgaris cDNA 5', mRNA sequence TTGGACTGAAGGGAGCTCCT EST sequence (targeted fragment marked with yellow): GTGGTTCTGCTGCATATTCCCAGAGGGGGACCCTTCAGTCCAGTTTCTCACCATCACTTCGTCCTTGGAGTGACATTCCCATGGCTTCTTCCGCAGAACATCACAAGACACAACCAATTCAACAGGCTTCCATCTTTGGCAGCAGGTTTCTGTCTGATGCATTGCCAGGGTTCTGCATTCCTGCTAGAATTCAAGGCCAGGACGGGAGTCATGGTGTTAGTCCCGACAAGCCATCATCTTCTTCTCCTAATTCTCATCACCAAGCACAAACGTGAACTGCACAATGCTGCATCGTTCCTTATTTATCAAGTACTTTGCTGATTATCCATTTCTCTTTTCTTGGACAGTTATGGTAAACACTCAGAAGGAAAAGGAAAGGGGAAAGGGACCACTTTATGTGATTTGTGCTAACATGTCATCTTTTGTTTTTAATGGAAGAAAGAATGAAAACTGATCAAAGTCATTTCCCATGCAAAGCTGCAAATTGAGTAACAAAGTTATTGCCCTCACTGACTATTATTCCTTTTTAAATTCTTCTCATGGATCTTGCTATGCAGGAGCATTGTATACCAGACGTGAAAACGTGGGAGGATTAAGATGGAAACATTTTGCTGATCTAAACAATTTGTCTGGTTGGATTTCAGCTTTTTATGTCTT | |||||||||
gi|171644005|gb|FE693089.1|FE693089 Pv033A_M13R_C07.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA seque TTGGACTGAAGGGAGCTCCT EST sequence (targeted fragment marked with yellow): GGAGGAGGAGGAGGAGGAGGAGGAGGCTCGAGTTATCTTCCGTTGGATAACGACACGATAAGATCGTTCTTCCCCATTACGACGTCGTCGTTGATTCAGTTCCAGAGCTACCCACCGGATTTGCTTTCGAGGACGAGCAGCCAGGACTTGCGTCTCTCGCTTCAGTCCTTGCAGGACCCGATTATGCTCCACCATAACCAAAACGAGCCCGTGCTTTTCGCTGGAGCCGGGTTTGATAACATGGTAGCGTGGAACAACAGTGGTAATGCTAATAATGATACTCATGGTGGTGGAGGTGGAGGAGGGTTTGTGCTTAACGCTCCCTCGCCTTTGCCGGGGCCGGCGACGGTGGCGTCGCCGGCGGTGGTTTTTGGCTATGGTAATGGTAATGGTCAAGGCCAGTATTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCGTCCGTTCGTGCGTGGATTGACGCGCCGTCGTTCGTGGCCGCCGCCGATCATTATCATCGGCATCACTATCTGTCGCC | |||||||||