| mature miRNA: TTGGACTGAAGGGAGCTCCTT species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|192302249|gb|FG995845.1|FG995845 GLLEM17TR JCVI-SOY1 Glycine max cDNA 5', mRNA sequence TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTCTTTTCAGTAGAGCAATGACAAATTAATTATATATAAACAAATTGGATTCACTGAACATTTCCGATCAAGCAATTATACACTGACCAGTAACCACCCCCAAAGAGTATAGCTAACATTAATTTAATCTGTATGGAATTATAACATGGTTGACATTAATTCTCGTGATGCAATCTGCTTTCAATTCAGGTCTTGTTCAACAGCTGGGGATTTGTGTTTGAAGAATCTCAAAAGTACCACTTTGACATTGTCCTACATTAAGCAGATCTTGCACTAGAAAGTTCGACTTTGCCTCCACTTCTCCCATCAGCCGTTGGAGATATTGCTCCTTTACAATAGTAGGTTCCAATCTTAAACTTTGGACCACCCAGGTTTTCTGCAAATAAGTATACAAGATGAGTCTTCTATTTCGTGTAAAATGTACCACTATTAAAAAAGGGAAAACTATATATAATAAGTGCACCTCAATTTCACATAGGAAGATAATGTAACATTCAGCTCTTCTACAATGCAAAAATTAATCAATTGAACTTTTCTGTAAATATATAGCTCGGCTCTTAGTATCTATGTTAGAAAATTTCACACAAAAACTGCGTACACTACAATAACATTAACTAAGCTATTAAAAAGAAAACAATATCCTGAAGAAAAGCAAGTATGTATGAGTGAAGGATGTAGGAGACGAAGAGGTCCCTTCAGTCCAAGACGTGACAGTCACGACTGAATGCAGCTCCCGCATCGTTGGA | |||||||||
gi|209711819|gb|BW674079.1|BW674079 BW674079 GMFL01 Glycine max cDNA clone GMFL01-37-B20 3', mRNA sequence TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): ATTGGATTTTACGCGTGCTTTTGGTTCACTAGGCTCATCTACTCCTCAGTCAAGATTGATTAGTTATAGCACCCAGTGGTTTTGGATTAATCTACTACACTTCTTGAAGGACGAAGGACCGGTTTGTGTAAGGATTATGAAGGTCAGGTACTGTCATGTTCAGAATCAGATGTAACCTATTCGTATACAATTTTGAATTGTGACGACTGTTATTCTTTTGTTTCAATATCTTTTTACTTGCCTGAGTTATCGAAGTATAGGTTTTTAAGGTGTACCCTTCGGTCTAACTTGGCTGTAGTTGTTTCCCGTGTTACTACTGTCGGAGATTACAAGTTGGCTCCTTGTCAGATGATTTTTTATTATTAGCGGTGTAATAAAAAATGATATCTCAACAACGTAGTTCGCAGCC | |||||||||
gi|192303327|gb|FG995621.1|FG995621 GLLEK83TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): ACAAGCTCAAGAGCATTCCATCAGTGTCTTGAGCTCCAAATGGAGAACACCTGGATCCTGACTTTTCACCTTCTCCTCCTCCTACTCCATCCAAATGCAGCAAAAGGGGCCATTGGTGTTGGTGTTGGTGTTGGTGGCAGAGGTGGCATAGGTGTTGGCATTGGCATTGGGGGCAGTGTTAACACCCCAGGGCCCTCTGGATCAAACCTCAAGAGTGCCTTCACAGCACTCCAGGCATGGAAATCTGCCATGACCGATGACCCATTGAAGATTCTGGATACTTGGGCTGGTCCCAATGTGTGTTCCTACAGAGGTGTCTTCTGTGCAAACTCTCAGGATGATAATGGAATTGTCACAACAGCAGCAACCGAGTCTTCTATTGTTGCAGGAATAGATCTCAACCATGCAAACCTCCAAGGGACCCTTGTCAAAGATCTCTCTTTGCTCTCTGACATCACTCTTTTCCATCTCAACAGTAACAGGTTTTCTGGCTCACTCCCTGACACATTCAGGGACCTCACTTCACTCCAAGAGTTGGACCTCAGCAACAACTTTGGAGGTGAAATTCCAGACAGTTTGGGAAATTCACCTGCCTCAGTCATCAACTTGGCCAACAACAAGTTGAGTGGAAGCATCTCTTTCAGCTTTGGCTTCATGGGTTCAGACTGAAGAGATTCTCTTCCTTAACAACCAGTTA | |||||||||
gi|120495074|gb|EH223241.1|EH223241 JGI_ABWZ3903.fwd ABWZ Phakopsora pachyrhizi infected soybean leaf tissue 13-15 days post ino TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): CTCTTCCATGTGATCCCGTTCTTAACACCACTGATCAGTTTCATGGTGATAACCTTACCGGCAGCCATGCCGCATTAAATGGCAATGCCTCTGCTTCTGTGCCCATATTTGGGGCCATGAAGTTGGAGCTCCCTTCACTCCAATATCCAGAAACTCAACATGGTAGCTGGGGCCCGCCAATGTCCCCACTTCCTTCACTGGAGTCTGTTGATACATTGATTCAGTCTCCTACACTTGAGCCTATTCTATCAGATCCCATTTCTCCACAAAGCAGTGGTTTGCTAGAAGCGATAGTCTACAACTCGAAAAGCTTGAAAGGCTCAAACAATGATTTATTATTGCAAGAGACAATTGCTACAGCCAATGAAGTAGCTAATATTTCAACCTTGAATCATTCCTTTCAGACAGAATGGGATGAACTAGGCGATCCAAATTCCCCCTTAGGTCAATCTGCTGCTTCAGTCCTGACTGACTATACTCCTGTACGAATGTGCTCTGTGGATGGGTATCAATCAACTGAAACCAGTCAGGATCATGATGATAAGCATGAAGCACCTACCACCCAGTTCCCAGATAGTTCCAGTAAGAAAAAAATATTGAAACAGGTGGATTACACACAGCCAGATGCTTTACTTGACTTGGGTTGGTTTGGGAATAATACTAAGTATGAAAGCGATCAA | |||||||||
gi|151397176|gb|EV267049.1|EV267049 GLLBE13TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): GGAAGATATTTATGCCACTAGGGCTAGGTTGCTTGTCGATGGGTGACTATACTATGCCACTATGCTTCATGTGATGGATCAATAATTAAGATCTATATTATACTTCTTCCTTGCTTGTTTGTGTTTGAGTGTTGTAATGCTTCAGATACAAGCATGGCCTACAATAATAGCCTTGCGAAAGATAGTAATTAGTTGTTTCTTGGATAATTAGAGTAGGGTTGTGTTCGAGGATTGGTGGAGGATATGGAAGGGGCTCACTTCAGTCCAGTCCGAGTCGGTGAAAAATGACTGAAACTCAGCTGCTGACTCGTTGGCTCGAGAGTTCACCATTAAGATAGATTGATGTTCGGCACTCACGCCATGTAATTAAGGTGGTGTGCTTCTGATCCAACGATGCGGGAGCTGCATTCAGTCGTGACTGTCACGTCTTGGACTGAAGGGGCCTCTTCGTCTCCTACATCCTTCACTCATACATACTTGCTTTTCTTCAGGATATTGTTTTCTTTTTAATAGCTTAGTTAATGTTATTGTAGTGTACGCAGTTTTTGTGTGAAATTTTCTAACATAGATACTAAGAGCCGAGCTATATATTTACAGAAAAGTTCAATTGATTAATTTTTGCATTGTAGAAGAGCTGAATGTTACATTATCTTCCTATGTGAAATTGAGGTGCACTTATTATATATAGTTTTCCCTTTTTTAATAGTGGTACATTTTACACGAAATAGAAGACTCATCTTGTATACTTATTTGCAGAAAAC | |||||||||
gi|193689715|gb|FK632276.1|FK632276 454GmaGlobSeed366908 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): GGTTTGTGTAAGGATTTTGTAAATTTCAGGTACTGTCATGTTCAGAATCAGATGTAACCTATTCGTATACAATTTTGAATTGTGACGACTGTTATTCTTTTGTTTCAATATCTTTTTACTTGCCTGAGTTATCGAAGTATAGGTTTTTAAGGTGTACCCTTCGGTCTAACTTGGCTGTTGTTGTTTCCCGTGTTACTACTGTCGGAGAATTACAAGTTGGCTCCTTGTCAGATGATTTTTTATTATTAGCGGTGTAATAAAAATTGATATCTCAACAACGTAGTTCGCAA | |||||||||
gi|209709881|gb|BW657280.1|BW657280 BW657280 GMFL01 Glycine max cDNA clone GMFL01-12-B06 5', mRNA sequence TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): AGGAGTGTTGTAATGCTTCAGATACAAGCATGGCCTACAATAATAGCCTTGCGAAAGATAGTAATTAGTTGTTTCTTGGATAATTAGAGTAGGGTTGTGTTCGAGGATTGGTGGAAGATATGGAAGGGGCTCACTTCAGTCCAGTCCGAGTCGGTGAAAAATGACTGAAACTCAGCTGCTGACTCGTTGGCTCGAGAGTTCACCATTAAGATAGATTGATGTTCGGCACTCACGCCATGTAATTAAGGTGGTGTGCTTCTGATCCAACGATGCGGGAGCTGCATTCAGTCGTGACTGTCACGTCTTGGACTGAAGGGGCCTCTTCGTCTCCTACATCCTTCACTCATACATACTTGCTTTTCTTCAGGATATTGTTTTCTTTTTAATAGCTTAGTTAATGTTATTGTAGTGTACGCAGTTTTTGTGTGAAATTTTCTAACATAGATACTAAGAGCCGAGCTATATATTTACAGAAAAGTTCAATTGATTAATTTTTGCATTGTAGAAGAGCTGAATGTTACATTATCTCCCTATGTGAAATTGAGAAAACCTGGGTGGTCCAAAGTTTAAGATTGGAACCTACTATTGTAAAGGAGCAATATCTCCAACGGCTGATGGGAGAAGTGGAGGCAAAGTCGAACTTTCTAGTGCAAGATCTGCTTAATGTAGGACAATGTCAAAGTGGTACTTTTGAGATTCTTCAACACAAATCCCCAGCTGTTGAACAAGACCTGAATTGAAAGCAGATTGCAT | |||||||||
gi|209715928|gb|BW650943.1|BW650943 BW650943 GMFL01 Glycine max cDNA clone GMFL01-01-B10 3', mRNA sequence TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): AGAGAAAAATGATGAGTCTCATCGTCATCATCACAAGTTAGTTGTTGTTCCTCATCACAACCACAATGTGAACCTCGTTTCACAAACAGGCTTCTTTCACGGAGCTACTCACTGGCAGTGATCCCAACAAAGGGTGTGATGAGGCTAATAACAACATGATGTTCAACAAAGCAGCAGGTAGACTGCAATGGTGTTCATCAACAACACCTATGGACTACTTTCTGGGGCTTTCCTCTTCTAGAACAACGACACACAATCACAATCACCTTCATCATCATCAATATTCTTCTTCTTCTTCTAGTGGGTTCTCATTGGCACAAATCCAACTAGGACATTCTCTTCCTGAGGCAATGAATCATGTTTCAGCATTCAACAACAATGTGAGTGGTGATAACCACAACCACTCATCATCAGATCCTCATCTGCAGCAGCAACACTTGTCATTGATACCGGATCATCTTATGTCAGCTGTGGTTACTTCTTCTGCTGCTTCTTCTCATCATCATCATCATCATCAGCCCAGCGGGAACGATTACAATCTGAACTCCACCATGTCTTCGGGCCTCGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTGCTGCCTCACTCGCAGAGGTTTTCGCCTATAGACGGATC | |||||||||
gi|209701470|gb|BW667331.1|BW667331 BW667331 GMFL01 Glycine max cDNA clone GMFL01-27-F17 5', mRNA sequence TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): GGAGACTTGATTTGGACAAGCTCAAGAGCATTCCATCAGTGTCTTGAGCTCCAAATGGAGAACACCTGGATCCTGACTTTTCACCTTCTCCTCCTCCTGCTCCATCCAAATGCAGCAAAAGGGGCCATTGGTGTTGGTGTTGGTGTTGGTGGCAGAGGTGGCATAGGTGTTGGCATTGGCATTGGGGGCAGTGTTAACACCCCAGGGCCCTCTGGATCAAACCTCAAGAGTGCCTTCACAGCACTCCAGGCATGGAAATCTGCCATGACCGATGACCCATTGAAGATTCTGGATACTTGGGTTGGTCCCAATGTGTGTTCCTACAGAGGTGTCTTCTGTGCAAACTCTCAGGATGATAATGGAATTGTCACAACAGCAGCAACTGAGTCTTCTATTGTTGCAGGAATAGATCTCAACCATGCAAACCTCCAAGGGACCCTTGTCAAAGATCTCTCTTTGCTCTCTGACATCACTCTTTTCCATCTCAACAGTAACAGGTTTTCTGGCTCACTCCCTGACACATTCAGGGACCTCACTTCACTCCAAGAGTTGGACCTCAGCAACAACCAGCTCTCANGCCCTTTCCCCATGGTCACTCTCTCCATGCCAAGCCTCATCTACTTGG | |||||||||
gi|208325634|gb|GE123236.1|GE123236 454GmaGlobSeed865884 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): CGGCCGGGGCCGGCGACGGTGGCGTTCGCCGACGGTGGTGTTTGGTCATGGTTATGGTCAAGGCCAGTATTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACAGCCCTTCCGTTCGTGCGTGGATTGACGCGCCATCGTTCGTCGCTGCTGCCGCCGATCATCGGCATCATCACTATCTGTCTCCCGCGGCAGCGGCAGCGGCGTTGGTGTATCAGTCTGCTCCTCCCACGGCGGCATTTACGGCGGCGCCCGGTGG | |||||||||
gi|207732423|gb|GD709016.1|GD709016 454GmaGlobSeed451665 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): CGGCCGGGATTGTCACTTGGAACAGTGATGCAAGCATAGATATGAACAGAACCGGGTTCATGGTCAATTCACCAGCACTTCTAGGCCAAGGTGGTTCTGCTGCATTTTCCCAAAGGGGGACCCTTCAGTCCAGTTTCTCACCATCACTTCGTCCTTGGAGTGAGATTCCAATGGCTTCATCAGAACATCACAAGTCACAGCCAATTCAACAAGCTTCAATCTTTGGCAGCAGGTTTCTGT | |||||||||
gi|298177461|gb|HO023594.1|HO023594 ocpsga0_0194_B08.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): GGGGGGACAAGCTCAAGAGCATTCCATCAGTGTCTTGAGCTCCAAATGGAGAACACCTGGATCCTGACTTTTCACCTTCTCCTCCTCCTGCTCCATCCAAATGCAGCAAAAGGGGCCATTGGTGTTGGTGTTGGTGTTGGTGGCAGAGGTGGCATAGGTGTTGGCATTGGCATTGGGGGCAGTGTTAACACCCCAGGGCCCTCTGGATCAAACCTCAAGAGTGCCTTCACAGCACTTCAGGCATGGAAATCTGCCATGACCGATGACCCATTGAAGATTCTGGATACTTGGGTTGGTCCCAATGTGTGTTCCTACAGAGGTGTCTTCTGTGCAAACTCTCAGGATGATAATGGAATTGTCACAACAGCAGCAACTGAGTCTTCTATTGTTGCAGGAATAGATCTCAACCATGCAAACCTCCAAGGGACCCTTGTCAAAGATCTCTCTTTGCTCTCTGACATCACTCTTTTCCATCTCAACAGTAACAGGTTTTCTGGCTCACTCCCTGACACATTCAGGGACCTCACTTCACTCCAAGA | |||||||||
gi|192313158|gb|FK004720.1|FK004720 GLMDI19TFB JCVI-SOY2 Glycine max cDNA 5', mRNA sequence TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): GGGAATGAACAAAGAGCCCATTTATGTCTTCAATGTAGAAACTTGATTTGGACAAGCTCAAGAGCATTCCATCAGTGTCTTGAGCTCCAAATGGAGAACACCTGGATCCTGACTTTTCACCTTCTCCTCCTCCTGCTCCATCCAAATGCAGCAAAAGGGGCCATTGGTGTTGGTGTTGGTGTTGGTGGCAGAGGTGGCATAGGTGTTGGCATTGGCATTGGGGGCAGTGTTAACACCCCAGGGCCCTCTGGATCAAACCTCAAGAGTGCCTTCACAGCACTCCAGGCATGGAAATCTGCCATGACCGATGACCCATTGAAGATTCTGGATACTTGGGTTGGTCCCAATGTGTGTTCCTACAGAGGTGTCTTCTGTGCAAACTCTCAGGATGATAATGGAATTGCCACAACAGCAGCAACCGAGTCTTCTATTGTTGCAGGAATAGATCTCAACCATGCAAACCTCCAAGGGACCCTTGTCAAAGATCTCTCTTTGCTCTCTGACATCACTCTTTTCCATCTCAACAGTAACAGGTTTTCTGGCTCACTCCCTGACACATTCAGGGACCTCACTTCACTCCAAGAGTTGGACCTCAGCAACAACCAGCTC | |||||||||
gi|193478149|gb|FK440694.1|FK440694 454GmaGlobSeed175326 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): TGGTTTGATTCATCATGGCCAGTCCCAAGCAGGTGCAAATCAAACACCTTCCAATGACCAAACCCTCTTCTCTGGCTCAACTCAAGTGGGGTTTGAAGCCAATTACCCCAGGATTGTGACTTGGAACAGTGATGCAAGCACAGATATGAACAGAACCGGGTTCATGGTTAATTCACCATCAGCACTTCTAGGCCAAGGTGGTTCTGCTGCGTATTCCCAAAGGGGGACCCTTCAGTCCAGTTTCTCACCATCACTTCG | |||||||||
gi|208335764|gb|GE134661.1|GE134661 454GmaGlobSeed877309 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TTGGACTGAAGGGAGCTCCTT EST sequence (targeted fragment marked with yellow): AAGCAGTGGTATTTCTAACGCAGAGTGGCCATTACGGCGGGTTTGTGTTCAACACGCCGGCGCCGGTGCCGGCGTTTGGCCAGTTTTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCGATTCGTGCTTGGATAGACCCTTCGGTCGATCACCACCACCATCATCATCACTACCTCTCGCAGTTGATCCACCGGGGTTCCGTCGCCGGAGGCAGCGGATTCTCCAGTGGATTCTCCGGCTTCCGNATTCCAGCACGAATTCAGGG | |||||||||