| mature miRNA: TTGTGGCTTTCTTGCAAGTTG species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|88831152|gb|CI081962.1|CI081962 CI081962 Oryza sativa (japonica cultivar-group) ABA: Abscic Acid treated callus Oryza sativa TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): CAGGAAACCCTTTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTGTTCTACAGCTGCATAGCTCGAACACCTGCAAGAAAGCCACAACCAAACAGCAGCAGCCAAACCACAAGTATTCTCCACCTCCCCTACTCCTGCGCTAACTCAAAACTGGCAAGAAGTGCCAAGCCTCTGCCTTGCCCTTTGCCCCGCAGCGCCGCACTTGCGCGAGCGGAATGCCTCGGGAAGGAGCTCCTGGAACTTCTCGAGGAATAGCGCCCATGTCTCCGATCCCATGTCGGCCAGCTTGACGAAGCTCGCACTTGTCGGAAGTTGC | |||||||||
gi|89181990|gb|CI113496.1|CI113496 CI113496 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): TTGAGAACACAACAAAAAACCCTGCAAGTCGAGCTTTAACAGTAGAGTACTCTGAAGACTGAACAAATGTTCAATGATCACATCAGGAAACCCTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCTGCATAGCTCGAACACCTGCAAGAAAGCCACAACCAAACAGCAGCAGCCAAACCACAAGTATTCTTCACCTCCCCTACTCCTGCGCTAACTCAAAACTGGCAAGAAGTGCCAAGCCTCTGCCTTGCCCTTTGCCCCGCAGCGCCGCACTTGCGCGAGCGGAATGCCTCGGGAAGGAGCTCCTGGAACTTCTCGAGGAATAGCGCCCATGTCTCCGATCCCATGTCGGGCAGC | |||||||||
gi|89167808|gb|CI021507.1|CI021507 CI021507 Oryza sativa (japonica cultivar-group) green shoot Oryza sativa Japonica Group cDNA TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): TGATGATAAATGTGCCTTCCCCAACAATACAGAGGAAGGTGTGCTTGTGAACTTTATTGTTTTGACAAGCAGACTTTAGCACTAACACAAAAAATAGAACATATGTGCTATTAGTTACACATCAAGCACTGAAAATACGGGAGTTAGATTGTTCTTTGGCGACTGATTCTGCAAGCACACACTAGACTACCACACACTAGACTACCAACCACAAAATCTAGCAGTTTACAAGAATGCCACAGCACATTTCTGAAGCCATATTATAGGCATAGCTTCGGTAGAAGCAGAAGAAAGGCACAATTTACACTGAGTCAACCACTTCAACCTGTTGTTGTGCAAGATATCTTTCCCTTCGTTCTTTCCATTCATCGATGACAAGCCCTTCGCCAACAATCTTTGGGCCATTCTCTTCAGGAGGTTTCTTTCTTGCCTCAAGTGCAGCCTCAGCCTCAGCCAACTGATTATTTAGCTTTTCCAGTTGTGGGCCTGGATTTCAACATTCAAAAAAACAACCCTCAGGATCTTCTCAACTACGGCTTGATCTCTCTGCTCATCAAACATTTCTGGTGCGT | |||||||||
gi|33681190|gb|CF309429.1|CF309429 ABF--03-J22.g1 ABF3-overexpressing transgenic rice plasmid cDNA library (ABF) Oryza sativa Ja TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): TTCTCTCTCTCCTCTCCCTCTCTCTCTCTCTCTGTCTCTCTCTCTCGGGGTATTGCAAGATAGTAGCTAATTAACCAGCCTTTGGCCTTCAGTTTCCCCATCGGTTCATCAGAGCACGCCTTCAATTTCCTAATCAATCTCCCATATAATTCTTTTTAGCTTGTATGCCTATCATTAGTACTTCTTGTGTTGTGTTGTCTTCTTGCCTTCTTTGAGCTAGAGCTAGCTAGGTTTGTGACCTGCTGTACGTGCGTGTGTTAATTAGATAGATGTCTTANATCTGGGAGAGAGCGAGGAGATGGGGAGGGGGAAGATAGTGATAAGGAGGATATACAACTCGACGAGCAGGCAGGTGACGTTCTCGAAGCGTCGGAACGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAACATGAAAACTGTGATAGACCGGTATACCAACGCANAGGAGGAGCTACTTGGCGGGAATGCAACTTCAGAAATTAAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTGCAAGAAAGCCACAAGCAACTGATGGGTGAGGAGCTTTCTGGC | |||||||||
gi|117210894|gb|CT855447.1|CT855447 CT855447 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): ATGAATCGCTCGCGGTCGCAGTCGCAGTCGCAGTTGCCCACACCCTTGCCGCACCATGGCTGGAACCCGCGGCGGATTCGAGTTATTGCACATGGTGGCACCAAGCATGAGGCAACAACCGCATTACTTGCAAGAAAGGCACAAGTAAGACCTCTCACAAGTAAGACAGTAAACTCATGTAGCTCATTCTTATATGTATTGTGTAATTCTTCCGTGGTTCTGTCACAGAAGACCAATCTATACCAAGTGATGGTAATTATTGAATTACCTTTTTCTTTGGAAATAATTAGTTTTGGAACTCAAAGTTGATAGCACCACTTTTAATTCAAAATCAATTAAATACAGGCATTACCATTTTAATGTGGTAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAATTGGCAAAAAGGGGGGACCCAGTCCCAAATTCCCCTAAATGTGATTAAAAATACCCGCGCCTCCTGGCCCCCCCGGGGGGACCCCGGACCCCGCCAACCCCCTGGGGGGGGCCAATAATCACCCGCCTATGCGGCGGGATCCTTTTTTAGCAGGGGGGGGGGAGAAAAAAAAAGGGGCTCCCAACCATTACCCCTTTCCCGAAAAAAGAGCCCCCCCTTTTGAAGGGGGGGGGGGAAAAAAAGAAAAAGGAGCCCGCCCCCAATATAGCCCCTCCTCTCCAAGAGGGGGGGCGCTCCCCCCCAAAAAGGGGGAAGAGGGTACCCCCCCCCCCCCACACCCCCCCTAACTTCATTACCCGCGTTTGGGGGGGGGGTGGGGTCCTCTCCCCACCCCACAGGACACACACCAATAAAGAAGGTATTTCCCCAAGCAGTAAGAGCCCCTCCAAATTTGTTTTGTTTTTTTTTATTTATTAATTATGGGTTTTTAATAAAAAGAGGTGTGGATTCGGGGAGGAAATTCTCTTCCCACCCACAAAAAAAAAAAAAAAAGAAAGAGGGGGGGCCGTGCTCGTGTTTATGGGTGTTAAAATGATATATTGTTTGTGTTTGTCCTTCCATCAAACCCCACCCCCTTCCTGCTCCAACAAAAATATAATGATATGATAGTGGTGGGTGGGGTGCGGTGTGTTTTTTTCTATATATGTAGGAGTGGGTGCAAAACCCCCCCCCCGCGACACGAAAAAAAAAGAGAACAGGAGAGAAAAGTTCCTCACACCCCCCCCCCACTCGACGTTCAGAGTGAAGGTGAGTGGGAGGGGGCGGGGGCGACCTCTCACATTTTGTTTTTTTTTTTTTTTGTGTTTTATATTTTAGTATATGATTGTATGAAATGAAGGAGAGGCGTCC | |||||||||
gi|88510538|gb|CI438044.1|CI438044 CI438044 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): CGAAATAAAAAGGATATATATATGCTTGGTATACATACACATGATTGAATATTGATCAATGCCCTATGGAACTTGATGAATTACATATCCATTTAAGTAGATACCGTTTGAGGCGCCTCATCACTATCAGGAAAGTATCAAGGCATAGGTGTGTAGTCGTCGAGGGCCGTTATTCTACAAAATTTAGCATAAGTCAAAATTAATTTGTCCCATCCAATATGAATCCTATAAAAGGAGAAAGTGTTGAAAACTTTTATAGAATGGCCAAAGTTATTGTGTGGCTAACTCCTCTGGAATTATAACTGTGCTGTTGCATAAAATTTTCGGAGTATGTTGGAGTGGGGCGTCTCGTAGGAAAGCCACAAGTGGAGACTTTGCGTATAAACCCTAAAATAGGGTGAAAGTATTGAGAAGTAATGATGCTAAACATGCCGG | |||||||||
gi|88970787|gb|CI385412.1|CI385412 CI385412 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): GGTCACATCAGGAACCCCTTTTTTTTTAATTGTTTTATTTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAAGTGGGCGGCCAATGACTGGGCAGGGTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGGCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAAGCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCTGCATAGCTCGAACAGCTGCAAGAAAGCCAAAACCAAACAGCAGGAGCCAAACCACAAGTATTCTTCACCTCCCCTACTCCTGCGCTAACTCAAAACTGGCAAGAAGTGCCAAGCCTCTGGCTTGCCCTTTGCCCCGGAGCGCCGCACTTGCGCGAGCGGAATGCCTCGGG | |||||||||
gi|29685906|gb|CB682181.1|CB682181 OSJNEf09D09.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf09D09 5', mRNA sequence TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): CACGCCTTCAATTTCCTAATCAATCTCCCATATAATTCCCCTTAGCTTGTATGCCTATCATTAGTACTTCTTGTGTTGTGTTGTCTTCTTGCCTTCTTTGAGCTAGAGCTAGCTAGGTTTGTGACCTGCTGTACGTGCGTGTGTTAATTAGATAGATGTCTTAGATCTGGGAGAGAGCGAGGAGATGGGGAGGGGGAAGATAGTGATAAGGAGGATAGACAACTCGACGAGCAGGCAGGTGACGTTCTCGAAGCGTCGGAACGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAACATGAAAACTGTGATAGACCGGTATACCAACGCAAAGGAGGAGCTACTTGGCGGGAATGCAACTTCAGAAATTAAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTGCAAGAAAGCCACAAGTAATCATCTAATGATTCTGCAATGGAAATTGATCATACATTAATATAAAATTCATCAAGAAAGTAGTTTATCAACAATTTAAATGCCACATGGAATTGTATAAGAACCACCAAAAGATGCTTAAATACTTGAAGGAAAACTTTAGGAATATAATCAGAATATTCACTGTCAGATTTATCAAGAAAGTAGTTTATCAACAATTTAAATGTCACATGGAATTGTATAAGAACCACCAAAAGATGCTTAAATACTTGAAGGAAAATTTTAGGAATATAATTAGAATATTCACTGTCAGATTTATTTTAATAGTATTCCT | |||||||||
gi|66913257|gb|CX100105.1|CX100105 RECm0919 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): CAGCGGAGGGACGGTCGGAGATTCCGGGTGACCACGCGTCGCTCTCTGTCTCTCTCTCTCGGGGTATTGCAAGATAGTAGCTAATTAACCAGCCTTTGGCCTTCAGTTTCCCCATCGGTTCATCAGAGCACGCCTTCAATTTCCTAATCAATCTCCCATATAATTCCCCTTAGCTTGTATGCCTATCATTAGTACTTCTTGTGTTGTGTTGTCTTCTTGCCTTCTTTGAGCTAGAGCTAGCTAGGTTTGTGACCTGCTGTACGTGCGTGTGTTAATTAGATAGATGTCTTAGATCTGGGAGAGAGCGAGGAGATGGGGAGGGGGAAGATAGTGATAAGGAGGATAGACAACTCGACGAGCAGGCAGGTGACGTTCTCGAAGCGTCGGAACGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAACATGAAAACTGTGATAGACCGGTATACCAACGCAAAGGAGGAGCTACTTGGCGGGAATGCACTTCAGAAATCAAGATTTGGCAGAGGGATGCCGCCAGCTTGAGGCAGCAACTGCACACTTGCAAGAAAGCCAAAGGCACTGATGGGTGAGGAGCTTCTGGCCTAGTGTTAGAGACTTACAGGCTTCCGGATCGGGTGAAATCAGCTACGTATATCCAATGGAACGGCCCCCTTTGCACAGGAACCCGGGCTCCTGTGAGGGGACCTATTCCAGGAAAATGAATCTTAAGCTAGTCGTTGACAAAGGGGGGTTACGCTGGCGGAACAAGGGCGGTTGTAGATGACCCAGGTGGGATCAGGCTGTCTCTCTTAGACACAGAGNGAGGATATCACTAAGACACCGCGCCATTCGTGCGCAGTGATAGTACCTCAGCTCAGGCGACTAGGCGTGCTGGCGTCTAATCAGAGAGGTAGCAGCAGATGACTGGTGAGTAGAGG | |||||||||
gi|218495118|gb|FG965580.1|FG965580 MA_LYP9_04364 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): ATTCCAAGAATCCCGAAGGAATCGACGCAAGGTGGACCACGGTGGGAGATCCTCTTCTTCTTCCCCAACTCCGGCCGCCGACGCCATTCCTTTCTTTCTCCTTCTCTGAAGCCTGGGGGTACACCGTCGATGACGACCGTAGCAGCCGCGCCGTCGCCGAAGCAGTACACCGTCGCCAAGACTTCGCCGAGCCGCATTTGCTGCTTGGTGAGCCTCCTAGTAGTCCCTAGAGTCCTTACCAAACGCATGCACGATTAGATCGAGCCTCAAAACTCACATGCATGTGCAAGCCGAGCTTAGCCGCCGCTTCTAATACCCTATCAGCCGCTATAGAACACCAAAGCTTGCAAGAAAGCCACCAATAGGTTCGCACAGTTGTTCTCTATACTTTTTATTTTGGGAGCTTGAGCTGAATCGCCGCTGTTCGCCGCTGGTGATACTGTGAAGCTCGCGGCTGTGCTGCTGTTCTGTTCTGTCCAGAGCAAGGGCATGGCTTTTGAAATTTAAAGACTCCCAGGAATGTATTAGCAA | |||||||||
gi|117251853|gb|CT850884.1|CT850884 CT850884 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): TTTTTAACATCGTCGCGCCACATCCAAAGTCCAAACAGCCATGCACACTGGCACACACGCGCACACTGTGTTGCCAACGTGAAAGAAAGCCATGGCTCCCCTCTCCCTCCTCCTCCGCTCCGGCGCGCGGCCTGCTTCGCTTCCCCTCCGTGTCGATGGCGCCGCCAGTCAGAGAATAGCTAGCCTAGCGGCGCCACCGCGTCGGCCGTGGATCGGCCGTGGCGTGGCGCTGCGGCTGCCGACGTCGGTCTCGGCCGTATCGGCGGCCGAGACCGAGACCGAGACGCCGCCGGTGGCCGAGGAGGTGCGGGCGCCGGCGGCAGGGGAGGAGCGGTTTGACTGGCTGGACCAGTGGTATCCCGTGGCTCCTGTGTGCGACCTCGACCCGCGCAAGCCGCACGGGTAAGATGGTGCTGGGCCTCCGCGTCGTCGCGTGGGTTCGTACGGCGGGCGGCGAATGGCGCGTGGTGGACGACTCGTGCCCTCACCGTCTCGCGCCGCTGTCGGAAGGGACTCGTCTACTGGGAAGGCCCCCCTCCTGTGCAGCAAACCTTGGATGGGGCTTTCAAATGGGAAATGGTACCTTGTCTAGATCATTCTTCCAAACTTCTTGTCCTTTGGGTTCCTACCCGTAATCACCATTTTGTAAAATGACCCATAAATGAATTAATATTAGGTGTTTCTCTCAAACCCCTAAAAAAAATATATTCCTCTTGTCATTTATTTATTACAAAAAAATTCTACAATTTTTTGGTTTGTACTTCCAATCCGCACCCCGTCGAAAAACATTCATATTTATATTAAGAGGAATATAGGAAGTAAAACTAAGATTGATATATAACAACATATAAAATTTATTCGTTAGTTTACCTTTGCATGTTTATTTTTACTATTATATGGTGGGTATGTTGAGGAAGTGTGTTTATAATATGCTTCTTTCTCTACTTTTGTTTCTATTTATTCATCATTCACCTTGTATTATCTCATCTCACATTATCTTATTCCATTACATATACTATCATATCATTATTACTACTAAAGAGTAATAATAAAAATTGGATATTATAAATAATATTAATGAAGGATTAATGTATCCAAAATAAATACATAGTACGAAAAGAATATAAGGTAAGCTGTAACTAATAAAATGTCATAGATAAGCCTACTACAACGGTTGAGGAATTACATGATCTAATCATACATTTCACTCATGAGCTATAGATTTAATTTTACATATACTTACCGTCAATGAACGTATGACAACCCTTCTATTATAATTGAGATTTGTATTGTTAGCCTCATCTGAGATAGGCGATATAAATGAATTATTAACGTATTGATGATATGCACAATACTGATATGACGTAGGATATGATGGTTATTAATGATTAGTACTTTACTGTGCTTAGCAAATAAGACTTGCACTCTTACTGTTTTAGCATGTAATAGTAGACATTATCACATCTCTCTGTGATCTATATGCAAGAATCACTACAATGAAACGTCTCAA | |||||||||
gi|41884381|gb|BX929212.1|BX929212 BX929212 Oryza sativa library (Han B) Oryza sativa cDNA clone y787h05p5, mRNA sequence TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): CCATGTGTGGTACCCGGGAATCGGCCATTATGGCCGGGAATGCACTTCAGAAATTAAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTGCAAGAAAGCCACAAGCAACTGATGGGTGAGGAGCTTTCTGGCCTAGGTGTTAGAGACCTACAAGGTTTAGAGAATAGGCTTGAAATAAGTCTACGTAATATCAGAATGAGAAAGGACAATCTTTTGAAAAGTGAAATCGAGGAGTTACATGTGAAGGGAAGCCTAATTCACCAGGAAAACATCGAACTTTCTAGAAGCCTAAATGTCATGTCGCAACAAAAATTGGAGCTGTATAACAAGCTTCAGGCCTGTGAACAGAGAGGTGCCACAGATGCAAATGAAAGTTCCANGCACTCCCCATACAGCTTTCAGTATCCATTACAAAATGCTAACTATTGCCTCCCTAGTCTCTGAATTGGAGCCCAATCACAGCCAAAGCAGAAGGGGCAGTGCAAGCACAAACACGCTGTCTCCAGACACTGGCGA | |||||||||
gi|58691380|gb|CK080067.1|CK080067 78321rsicen_20618.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indi TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): GGGATGGTGAAGCAGCAATAGATTCCATTCCCTTTTGTCATTCTNTGGTTCAAGTCGCGGTGCTACAAACAATGAAAAGCTCAAGCGATTTATTAAAGATGATATGCTTCCTGCTATAATCCGACGCCTATATGATGATCTTCCATGTGCAGTTCAAAAGACCATCAGAAAGTTATCTCCCTTGATGAACTCAATCAATTGCAGGAAAGCCACCAAGGATCTCTTGGTTCTATGTCAGGAGATCTATAAAGTTTACATACGATGTCAGAATTTGGAAGGTGAAGACCAGGATACTGATAACATAGCATACTGGTTTGATGATTGGTTAACAAAGCAGAAGAAAGAACTTTGTGTAAAGGCATCCTATGCTATTCCTGATGAATTTCCAGCTACGCTGTGGAATTGGGAGTTTGAAGAAGAATTTC | |||||||||
gi|88258191|gb|CI360777.1|CI360777 CI360777 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): ATATTACAAGCAACTTATTTCATACTTACGAGTAAAACGTTGAACGTTTGAATACACTACATGCTTTCTAGACCAAGAATTATTGAGTGATAGACATTACAAGTAACTTATTTCGACCTAGTAGTTATAATTTGCAGGAAAGCTACACGAGCAATAAACACTTTCAGGGCAGCTTAACACAGTACAAATTTCAGGTTTTGTTTGGTCACCGCGTTCCCAAACCAGATGGAAGAAGTGTCACTTGCAGGGGATCAAGAATCACCGCATTTGCTGATGCCATCATCCCATCGGCCGTGAAATAACCGTCCTTTTCCATGTAGACGAAGTGCAAAACCTTGCTCATGAACAGAAGAGCTTCCTGGACGGTGGAGGAAAAACCCCCCATCTCTAGTCACCAGCCTTAGGAGGTCACACCTACTACCTG | |||||||||
gi|88340398|gb|CI659604.1|CI659604 CI659604 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, 24hr after treat TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): ACTGCGCCAATTTTCCTGCCTTTTCTACCCCCCACTTGGAATTCTGGAAACATCGATTCGATCCTTCTAGACCCTTCTCCGCCCCCGTTTTAAAGTGCGCCGGCCTCCCACCCGTCGCTTCATCGCTCGCGGTCGCAGTCGCAGTCGCCCACACCCTTGCCGCACCATGGCTGGAACCCGCGGCGGATTCGAGTTATTGCACATGGTGGCACCAAGCATGAGGCAACAACTGCATTACTTGCAAGAAAGGCACAAAATCATTAGATGATTACTTGTGGCTTTCTTGCAAGTTGTGCAGTTGCTGCCTCAAGCTTGCTGCCTCCCTCTGCCAAATCTATCAGCAAAAAAAGAAAATCATGTCAGTTTCCTTGAACTATATACATATGATTAATCTAGAAACGCAGTATGT | |||||||||
gi|88452309|gb|CI555386.1|CI555386 CI555386 Oryza sativa (japonica cultivar-group) root of seedling 2ppm BAP(benzyl amino purine TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): GGTGGTCCTTATTAAAATCATGTCTATAAGTTCAAGTTTGTATTACTATTTGTATGAAAGCCGCAACCGGTATTTATTTTACGAGCACAACGTGTCAACACAAGCTCTATAGAATAGATCATCTTTAAAGTTCAAGTTAACCTTGATTGTCCTCTTCAAGTCATCACCTTTACTTACCCACTAGTTTACTTTCCCTTCTTGCCCTTCTTCTTGGCATCCTTCTTGCCACCCTTCTCTTCAACTTCTTCGGCAGCCTTTTCTTCCTTCTTCTTGGTTCCGGGCTTTTCGATTTGGCTGGGGTCGAGCTTGAAGGTCAAAGCGCATTTACCGCAGTAGAGTCTGTCCCAGTGCTTAGCCATGAAGACACCGACACCGCAGCTTGGGCAGGACTTTCTGGTTCTGGAAACG | |||||||||
gi|88258710|gb|CI361296.1|CI361296 CI361296 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): GCGAGTAAAACGTTGAACGTTTGAATACACTACATGCTTTCTAGACCAAGAATTATTGAGTGATAGACATTACAAGTAACTTATTTCGACCTAGTAGTTATAATTTGCAGGAAAGCTACACGAGCAATAAACACTTTCAGGCAGCTTAACACAGTACAAATTTCAGGTTTTGTTTGGTCACAGCGTTCCCAAACCAGATGGAAGAAGTGTCACTTGCAGGGGATCAAGAATCACCGCATTTGCTGATGCCATCATCCCATCGGCCGTGAAATACCCGTCCTTTTCCATGTAGACGAAGTGCAAAACCTTGCTCATGAACCAGAAGAGCTTCCTGCACGGTGGAGGAACAACCCCCCCATCTCTAGTCACCAGCCTTAGGAGGTCACACCTACTACCCTGGAGAACCCTCCTCATCTCTCTCTTGGCCTCTCC | |||||||||
gi|88255186|gb|CI354010.1|CI354010 CI354010 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): ATATTACAAGCAACTTATTTCATACTTACGAGTAAAACGTTGAACGTTTGAATACACTACATGCTTTCTAGACCAAGAATTATTGAGTGATAGACATTACAAGTAACTTATTTCGACCTAGTAGTTATAATTTGCAGGAAAGCTACACGAGCAATAAACACTTTCAGGCAGCTTAAACAGTACAAATTTCAGGTTTTGTTTGGTCACAGCGTTCCCAAACCAGATGGAAGAAGTGTCACTTGCAGGGGATCAAGAATCACCGCATTTGCTGATGCCATCATCCCATCGGCCGTGAAATACCCGTCCTTTTCCATGTAGACGAAGTGCAAAACCTTGCTCATGAACCAGAAGAGCTTCCTGCACGGTGGAGGAACAACCCCCCCATCTCTAGTCACCAGCCTTAGGAGGTCACACCTACTACCCTGGAGAACC | |||||||||
gi|88906225|gb|CI375297.1|CI375297 CI375297 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): GATGAAATGTAATATGACTTGCAGTAATAAATGATATATCAGGAGGCCCAGATGAATTTTAATTACACATATTTCACACAAGGTTCTATCTTCTATGTATACAAGGCAGTAAGGTACTGTACATAGTTCCCAAATACTCCTATAAATATATGCATTCATGATTGGTGTTCTATGGAGCACATAACATACACGCATAACTTTTTTTTGTTTTGTTTTCATATCCTTCTGTGAAACCTATGAACACACAATACCCAAAATTCTTAGTATCGCCGTGGATCAGAGCATCTTGGGCTTGGACGGTGCGAGCATGGCGACGTGAAGAAAGCCACAACCAAGCAACAGAAGCACGAAGGCCAGGAAGACCGCCAGTGGTTCACTGACGAACCCAGACCACAAGGCCAACACTGATAAGACAATCATGGCGTAGCCGCTCCAGGCTAGACTGCCCCCATCCGGAATGGTGTTCTCCTCCACAGCATTATTCACCATCACGTCCTGCTCCTGCACTTGCTGGTGCTGCTGCACTTGGTTGTTGTTGTCACGGGGCCAATAA | |||||||||
gi|44679712|gb|CR293146.1|CR293146 CR293146 Oryza sativa library (Han B) Oryza sativa cDNA clone y715c05p5, mRNA sequence TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): ACTCCAAAAACCCTTCCCCTCTTCTCCCCTCGCCTCGGCCCGCCGGCGGACGGTCACCACCGCCACCTCCTCCTCCGATGGATCTCGCCGCCGTCCACGCCGCCCTCGCCAGCAAGTCCTACTCCTCCGTCGCCCCGCTCTGCGACGACCTCTTCCTCCAGGCCGCGTCCCGGGGCGCCGCCACCGACGGCTGGCCCTACGCCGTGCACCTCCTCGCCCACCTCTACCTCAACGACCTGAACAGCGCGAGGTTTCTGTGGAAGTCGACGCCGCAGGAGGCGAAGGACGCGCGACCGGAGCTCGCCGCTGTCTGGAGGATCGGGCAGTGCCTCTGGAACCGCGATTACGCGGGCGTCTACGCGGCCGCGCAGGGGTTCGAGTGGAGCCCTGAAATCGCCGACTTCGTGGCCGACTTCCTAGAAAGCTACAGAAAGCGGATTTTCCAGTTGTTGACTTCTGCATATTCCACAATCAGCGTTGCTGATGTGGCTCACTTCATGGGGATGAATGAGGAGGATGCTACTAACTATGCCACGCAAAACGGTTGGAGCTCGGATGCGGAGACAGGAGCTTACTGTCGGAAAACCAAGGTTAGACTACCAGAAATCCATGCACCCAACCCCACGATACCGAATCGGCTCCCCCGGCAGCAGCCACAAAAGGGCAAAGGAGAGCTAACACTATAACAGACTGCAGGGGACGGCAATAAAGATAAGACGCTCCCCACACGGTGACGACAGCAACAGCGAAGGAGGGCCGTCACAAGAAAGACAACGAGAGACAGCACACACACCAGACCTGACGCACGGTGCGGACGAGGCGACGACGAGAAGAGCAGACGCACATAACACCGAACGAGAACAA | |||||||||
gi|88501795|gb|CI695478.1|CI695478 CI695478 Oryza sativa (japonica cultivar-group) 4.5 leaf-stage leaf Oryza sativa Japonica Gro TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): GAGGCATCAGCCAAGCCACACGTCTCGAAGCTTCTTGTAACAGGAGCTAGGGTTAGGTCTCCGAGCCTCCGACCTTCCGATTCCTCTCCGCCGGCAGCCATGTCAGGTCGCGAGGTCCGCGAGTACACGAATCTCAGCGACCCCAAAGATAGGAAGTGGGGGAAGGGGAAGGACAAGATTGATGATGAGGACATCACCTTCCAGCGCATGGTCGCAAAGATGCAGGAGGTTGCTGGTGAACGGGGAGGTTACCTTCATGGGCGAGGAGCATTGGACAGTGATGATTTACTGTACCTAAAAGAACAAATGGAAGCTGAGGAAGACGCAGAGCGTCTTCTTCGCCGTACTGAGAAGCGTGCATTTGCTGCTTTTAAGAAAGCCACAATTTTAGCTGATTCTACACCTGCTGTTCCTGNGGCTCTTCGAGTNG | |||||||||
gi|88835803|gb|CI370908.1|CI370908 CI370908 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): GTTCAATGATCACATCAGGAAACCCTTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGGGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCTGGATAGCTCGAACACCTGCAAGAAAGCCACAAACAAACAGCAGCAGCCAAACCACAAGTATTCTTCACCTCCCCTACTCCTGCGCTAACTCAAAACTGGCAAGAAGTGCCAAGCCTCTGCCTTGCCCCTTTGCCCCGCAGCGCCGCAATTGCGCGAGCGGA | |||||||||
gi|88266144|gb|CI377046.1|CI377046 CI377046 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): GATCACATCAGGAAACCCTTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCTGCATAGCTCGAACACCTGCAAGAAAGCCACAACCAAACCAGCAGAAGCCAAACCACAAGTATTCTTCACCTCCCCTACTCCTGCGCTAACTCAAAAGTGGCAAGAAGTGCCAAGCCTCTGCCTTGCCCTTTGCCCCGC | |||||||||
gi|117219492|gb|CT858661.1|CT858661 CT858661 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTGTGGCTTTCTTGCAA-GTTG EST sequence (targeted fragment marked with yellow): ATCTCTCTCCTCCCTCTAAAACTCTCTCTCTCTCTCTCTCTCTCGCGGGGTATTGCAAGATAGTAGCTAATTAACCAGCCTTTGGCCTTCAGTTTCCCCATCGGTTCATCAGAGCACGCCTTCAATTTCCTAATCAATCTCCCATATAATTCCCCTTAGCTTGTATGCCTATCATTAGTACTTCTTGTGTTGTGTTGTCTTCTTGCCTTCTTTGAGCTAGAGCTAGCTAGGTTTGTGACCTGCTGTACGTGCGTGTGTTAATTAGATAGATGTCTTAGATCTGGGAGAGAGCGAGGAGATGGGGAGGGGGAAGATAGTGATAATGTTTATAGACAACTCGACGAGCAGGCAGGTGACGTTCTCGAAGCGGGGGGGGGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAACATGAAAACTGTGATAGACCGGTATACCAACGCAAAGGAGGAGCTACTTGGCGGGAATGCAACTTCAGAAATTAAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTTGCAAGAAAGCCACAAGCAACTGATGGGTGAGGAGCTTTCTGGCCTACGTGGTAGAGACCTACAAGGTTTAGAGAATAGGCTTGAAAAAAGTCTACGTAATAACAAAAATGAAAAAGGGAAGCCTAAATTCCCCAGGAAAACATCGAACTTTCTAAAAGCCCTAATGGCATGTCCCAACAAAAATTGGAACTGGTTAACAAGCTTTCAGGCCTGGGAAAAAGAAGGGGGCCCCAAAAACCAATGAAAGTTCCCACCCTTCCATACGGCTTTTCGTATCCAAAAAAAAAGGGTAATGAGGCCCCCCAAAGCTGGGAATTGGAGCCAAACCCCACGCAAAAGAGAAAAGGGGGAGGGGGGAGTAAAAAACACCTTGGCCCCCAAAAAGGGGGCGAAAAAATTTTATTTTGCCCTTTAAAAAATTTTGGGGCGGAAAAAAACGGGGAGAAAAAAAAAAGTGGTTAATTATTTTCTAAAAAAAGACCAACCAAAGACGCCTCTTTTTGAAAGAAGATGAGAGTGATATTATTTTTGTGTGGTAGAATGAGGTGGGAAAAAAGAAAAAAAAAAAACAAAAAGAGGAGGAAAACAAAAAACAAAAAAAAAAAAAAAGGAGGGGGAGAAACAAATAGAAAAAATTATTCTGTTTGTGTGTTTCGATGGGGAAAGAAGAAGC | |||||||||
gi|58673831|gb|CK062517.1|CK062517 56600rsicek_11249.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): AATGTTGGGTTTGGGCAATCTGTGCATGTTGGTCTATAAGTGGGGACTTGTTACGTGGGATTACCAGTGCATTAGCTAGTCTCCCAGACAACTTGAAGGAAAAGATGTTCCCCAATGTCCCGTGCAGAGGACAACTCCAAGATCTGAATAATTCTGTGCAAGAACTTTCATGCAGAAGACGCACTTCAGATGTTTCATGAGAGCATTCTTCGGAGTAGCCATTCATCAGAGGAACCAGATGCAACATTCAAGAGAGCTACAGATTCCAGTAGGTTGCAAAGCCTCTCATAAGGATCTTGTGATATTGTTGCATGAATGCCCAGATGTGAAAGTTAGTGAAGAATTGACAGGAGATTCATAAACGAGTTGGCGGAATTGTGAGCACTACCAATCCTATG | |||||||||
gi|58590329|gb|CF988637.1|CF988637 19988rsicee_1346.y1 Oryza sativa cv. LYP9 tillering whole plant cDNA library Oryza sativa Ind TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): GCCAAGTTAGGCACATGTTTGTCAAACCACGGGCAGCGGCATGTACTCCTAGTGTGTAGACGGTCACTTGCACGAAAGCCACAAGTCCTCGGTGCACGTCTGAGCAACTGCGCCGATCCATATGCCTGGAGATCATTATTCAATCTCGTATATGCAATCAAAACGATGTACCTCAGGGCACATGCCATGATCAGTGCTGCGTGGTCAGACATGCATCCCGGAGCACTGTGATGCCCATCCTCATGACTGATCGTGTCGTGTGCTCATTGTCGTGCAGGAGGAGGCGGCGGCCGGCGGCGGCGAGGTGTGC | |||||||||
gi|88259002|gb|CI363295.1|CI363295 CI363295 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): GAAAAGAGTAGTTGTATACATTACAAGCAAATTATTTCATACTTACGAGTAAAACGTTGAACGTTTGAATACACTACATGCTTTCTAGACCAAGAATTATTGAGTGATAGACATTACAAGTAACTTATTTCGACCTAGTAGTTATAATTTGCAGGAAAGCTACAGGAGCAATAAACACTTTCAGGCAGCTTAACACAGTACAAATTTCAGGTTTTGTTTGGTCACAGCGTTCCCAAACCAGATGGAAGAAGTGTCACTTGCAGGGGATCAAGAATCACCGCATTTGCTGATGCCATCATCCCATCGGCCGTGAAATACCCGTCCTTTTCCATGTAGACGAAGTGCAAAACTTGCTCATGAACCAGAAGAGCTTCCTGCACGGTGGAGGAACAACCCCCCCATCTCTAGTCACCAGCCTTAGGAGGTCACACCTACTAC | |||||||||
gi|88996601|gb|CI389267.1|CI389267 CI389267 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): CGTATCAGGAAATCCTTTTTTTTTAATGGTTTTATTTGAATGACATTTTTGAATGCATATCATGAGTGGAAGAATGGGGGGCCAATGACTGGGCAGGCTGATCACCCCAACTTCCTTAAAGCAATCATGTCTAATAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAACATGGACCTCTGGGAAAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTAAAGCTGCATAGCTCGAACACTTGCAAGAAAGCCACAACCAAACAGCAGCAGCCAAAACACAAGTATTCTGCACCTCCCCTACTACTGCGATAAGTCAAAACTGGCAAGAAGTGCCAAGCCTCTGCCTTGCACTTTGCCCCGAAGCGCCGCACTTGCGCGAGCGGAATGCTTG | |||||||||
gi|33680436|gb|CF308675.1|CF308675 ABF--02-J09.g1 ABF3-overexpressing transgenic rice plasmid cDNA library (ABF) Oryza sativa Ja TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTCTTTTTTTTTTTCTCTTTTTTTCCTTATACATTTTTTATGGCTTTTAAGTGGGTATATAACGCACAAAATTCACGAAATAAAACAGACACCTTTAAGCCCCCTCAGTCCCAACACAAACTACTCCCTATGTACAATGTGCATGAAAGCCCCAATTGACCTAAACAGGCCATTATCTTGCTGAATGAAATCTTCAAGCGAAAATCTAGTTCCACACTTGATTCACCCTCAATATGAATCAAATGGGTATGGTCATGTTGAAAGGATTTACACAGGTTTTTCACGGGTTCACTAAGCCAACTATTAACACTTTTTTAACACTCCAAGATCGAACTCCGGCAATTCCCCAAAACATCCAAATAAATTCATCCGCGAATTGATAAATAACTTTAAAAACCCTTAGGCTACCCATAGGACACCCTTATAAAA | |||||||||
gi|88258229|gb|CI360815.1|CI360815 CI360815 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): AGTTGTATACATTACAAGCAACTTATTTCATACTTACGAGTAAAACGTTGAACGTTTGAATACACTACATGCTTTCTAGACCAAGAATTATTGAGTGATAGACATTACAAGTAACTTATTTCGACCTAGTAGTTATAATTTGCAGGAAAGCTACACGAGCAATAAACACCTTTCAGGCAGCTTAACACAGTACAAATTTCAGGTTTTGTTTGGTCACAGCGTTCCCAAACCAGATGGAAGAAGTGTCACTTGGAGGGGATCAAGAATCACCGCATTTGCTGATGCCATCATCCCATCGGCCGTGAAATACCCGTCCTTTTCCATGTAGACGAAGTGCAAAACCTTGCTCATGAACCAGAAGAGCTTCCTGCACGGTGGAGGAACAACCCCCCCATCTCTAGTCACCAGCCTTAGGAGGTCACACCTACTACC | |||||||||
gi|86883702|gb|CI328730.1|CI328730 CI328730 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): CAGGAAACCCTTTTTTTTTAATGTTTTATTTGAATGAAATCTTTGAATGCATATAATGAGTGGAAGAACTGGGCGGCCAATGAGTGGGCAGGCTGATCATCCCAATTTCCTTCAAGCAACTCGTGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCAGAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGGTTTTATTCTACAGCTGCATAGTTCGAATACCTGCAAGAAAGCCACAATCCAGACAGCAGCAGTCAAAACACAAGTATTTTAGCTTCCCTACTCGTGCGCTAATTCAAAACTGGGAAGAAGTGGAAGGGTCTGTGTTGCCCTTTGCCCGCAGCGCCGCAATTGCGCGAGGGGAATGCTCGGGAAGGAGC | |||||||||
gi|88375193|gb|CI523458.1|CI523458 CI523458 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): CACATCAGGAAACCCTTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAACAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACCACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCCTGCCTAGCTCGAACACCTGCAAGAAAGCCACAACCAAACAGCAGCAGCCAAACCACAAGTATTCTTCACNTCCCCTACTCCTGCGCTAACT | |||||||||
gi|86518057|gb|CI158263.1|CI158263 CI158263 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTGGATCACATCAGGAAACCCTTTTTTTTTAATGTTTATTTGAATGACATCTTGAATGCATATCATGAGGGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGACCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGGCATCATCACAACATGGACCTCGGGCACAGGCGATAGCAGTGGTGGCTCAAACCCTATGGGAAGCCTGTAAAAGGATGGCCTTTATTCTACAGCTGCATAGCTCGAACACCTGCAAGAAAGCCACAACCAAACAGCAGCAGCCAAACCACAAGTATTCTTCACCTCCCCTACTCCTGGGCTAACTCAAAACGGGCAAGAAGTGCCAAGCCTCTGCCTTGCCCTTGGCCCCGCAGCGCCGCACTTGCGCGAGCGGAATGCCTCGGGAAGGAGCTCCTGGAACTTCTCGAGGAATAGCGCCCATGTCTCCGATCCCATGT | |||||||||
gi|38473834|gb|CF957966.1|CF957966 5899siceb_6840.z1 Oryza sativa cv. PA64s leaf cDNA library Oryza sativa Indica Group cDNA 5', TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): TTTAATGATACGCTGGCTTGGCAAAATAAAAGAAACTGTAGATTATTTTTGCAAAACACATCTGCTTGCTACAGAAAAAAAAAAAAGTGTGTGGAAAGGAAAATAGGACATTGATTCAAATTTCCCTGGACAGCTTTTAAAACCAGCTTTTGAAAAAATCATGTCAAAGAATACTTTCTAATTTCTAAGAAAGCCAAAAAGT | |||||||||
gi|117236637|gb|CT848984.1|CT848984 CT848984 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): ATAAAAACGGGCTTGGTAAATTAATAGGCTTCTTCACATAATTTTAGTCATATGCACTAAAAGGATTTGTGATTACTTGTCGATCCTGACAATGCGCACCTATCTAACTTACTCATATCATTTTCTCACAGGTAAGTTGCCACTAAGTCCTCGGCGAGAAAAATAATTTTACTAACAATTTAATTGTAACAATAAATAAAGTGTACTCCTCGGAATGGACTATTTCTCCAGATCAGGAAACCAAAAATACTCCGCCGACCCCAGCGATATACCGGATTCCCGCTCCGACTTCACTACAACTTCTTATTTAAAAAAAACTAGCGAACCATTTGCCTTTCAATCTGACAACATCGATGACCTCAAGGCAGGTACAGCTAATATACTAGTCGCAGTCCGATGCCGTCCTCTTAGTCAGAAAGAATCTAGCATCTCCGATATTGAAACAATAGGGATTGTAGAAGACCGAGTCGTTGTTCTCCGCGAGCCTCCTCCCGAAAATGACCCAAGAGAGAGCTCAAGGGGACCGAAAAGGGAAAAAAATTTTACATTCGATCATTTCTTTGATCAAAAGGTCTCCAACTACACAATTTTCGAGCGCTGCACGAAGAATCTTATTCCAGGAGTCCTCGGAGGCTTCAATGGAACAGTCTTCGCTTACGGAGCAACTGGTGCAGGAAAGACATATACCATGATGGGGTCATCTAACAACCCAGGCATAATGTCTTACACCTTACAGGAGCTCTTCACACAAATAGCGCTCAACAAGCAAGAAGGCCGCAAGCTGGACGTCAAAATTTCTTTCTTCGAAGTTTACAACGAAACTATAATCGACCTTCTCGGTGACAAGAACTCCAATCTGGATA | |||||||||
gi|86822917|gb|CI251936.1|CI251936 CI251936 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): GATAGAATGTGCCTTCCCCAACNAATACAGAGGAAGGGTGTGCTTGTGAACTTTATTGTTTTGACAAGCAGATTTTAGCACTAACACAAAAAATAGAACATATGTGCTATTAGTTACACATCAAGCACTGAAAATACGGGAGTTAGATTGTTCTTTGGCGACTGATTCTGCAAGCACACACTAGACTACCACACACTAGACTACCAACCACAAAATCTAGCAGTTTACAAGAATGCCACAGCACATTTCTGAAGCCATATTATAGGCACAGCTTCGGTAGAAGCAGAAGAAAGGCACAATTTACACTGAGTCAACCACTTCAACCTGTTGTTGTGCAAGATATCTTTCCCTTCGTTCTTTCCATTCATCGATGACAAGCCCTTCGCCAACAATCTTTGGGCCATTCTCTTCAGGAGGTTTCTTTCTTGCCTCAAGTGCAGCCTCAGCCTCAGCCAACTGATTATTTAGCTTTTCCAGTTGTGGGCCTGGATTTCCAACATTCAAAAAAACAACCCTCAGGATCTTCTCAACTACGGCTTGATCTCTCTGCTCATCAAACATTTCTGGTGCGTAATCCATGGGTCCTTTGACCTTCAAGCTCAAAATCTTGAATTTAACCTTGCACTTCTGTAGAACATTCTCATTGTTCTCTGGGTGCTCGACAAACTTGAAAACAGTTGCTATGATGGTCCTCCCAGGG | |||||||||
gi|88198281|gb|CI198131.1|CI198131 CI198131 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): TTTTTTACATGCAACAATCATCATCTCATTGTTCAAGAGTTCAAACATTATCGTCGTCATCATGGGACGAGGAAAATTTGCCAGACACGCACCAGAGATGGGAGAACATCTGGACTCTGGTCTCTTCTAAGTGAAGCTAACAGTAAGGCTAANGGGTAACAACTCCCAAGAAGGCCACAAGATAAGACAACAGCAATCCTGAAACAACGTGAGACCCAAAAAGAAACGGTGCGGGCGATTCCCAAGCACAACGTACACTGGCAGTCGTTATTCGTGATGTCCGTCGATGATTTCAGCGCTGCTGCCAATGGTATTATGTTCTTAGAACCACTTGAACAGCAGACCACCGTGTGTGGCGAAGAAAGGCGCAAACACAAGGGACTCGACGGGCATGAGCTTGATGAGGATGTTGAGCGAGGGCCTGATGTGTCCTTGAGGGGGTCTCCAATGGTGTCACCGATCACGGCGGCCTTGTGGNCAGTCTGAATACCCTTGGGAACCCAAGGGTCCGACGCATGCTCACTGGCACCAGCCTCAATGTACTTCTTTGCGTTATCCCATGCGCCACCAGTGTTGGAGGCCGAGCATGGCGATCTGAACTCCGGAAACAAGAGCACCA | |||||||||
gi|29685220|gb|CB681495.1|CB681495 OSJNEf07M22.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf07M22 5', mRNA sequence TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): CTCCAGCAGCGACGGATCCACCAACGGCCAGCCGAATCGTCGGAGAAGGAGTATCTTCAACCAAGGGAGGAGGAGGATGGGAGGCCGACCAAGGCGAACTGATAGGGAGGATAGTGTGCGGCGAACTGTCTATGTATCTGACATTGATCAGCATGTGACTGAACAGAAGCTTGCTGAAGTTTTCTCAAATTGCGGACAATATTTTGCAGAGTAGATTTAAATTCATTTTGGTTAATACTTTATAACACCAGAGTGACAAAGAGTGATTTTGCATTGTAAGTATGGAGCACAACTTTTCTCTATGGTAAATGACTAAATGCAGTTGGGTGCAACCCTAGAGGTATGATTCACTTGAATGCCACTCTAGAACAAGTACAGCAGTTACTTTCGACAGCTGCTTGTTTTAGATTGTGACCTTGCCCGGCCTGAATGGATTGTGACTTAGCACCTAGACAAGACCAACTTGTCACAATAATTTATTATTGGCAAGAGGTAATAGTTTCTGAAAAAAAGGGAGATCACAAGATGAGAAATGGAAGAAACTTGCACGAAAGCAACAGTGGTAGATTGCCGTATATGTGGTGACCCAAATTCAGTGCTGCGTTTTGCCTTTATCAAGTTTGCCGATGATGTTGGTGCAAGAGCAGCTTTAACACTTGGTGGAACCGCGCTTGGTTATTACCCTGTGAGAGTTCTGCCATCTAAGACCGCGATTTTGCCGGTGAACC | |||||||||
gi|66925602|gb|CX112450.1|CX112450 EI076B09 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TTGTGGCTTTCTTGCAAGTTG EST sequence (targeted fragment marked with yellow): ACGGCTCCGTCAGTCGGCGGACTCCTGGTGACCACGCGTCTGGGCGAGAGAGACACTCTCACTGAACGAAGCTACCTACTTATTACCTAGCTACTCGATCGATCATCAGTCTAGATATTGCGGTTTGAACGGTAAGGTGGTGGTGGCGGTGATGGTGGTGGCGATGGTTGTGGCGGCGCCGGGGGCGTCGGCGGCGATCACGTGCGGGCAGGTGGGGTCGGCGATCTGCGCCGTGCATCTCTGTACTGTGACTGGGGACGGGGCTGTGCCATCACCCATGTGGGAGTGCGTTGCACACCCGGAGGACCCGGGAATTTTCTAAAAAACATGGTGGGGTGGCGGGCCCATTTGGAAGAAAGCCAAAAAAAACCGGGGCCCCCTGGGCCCCCCCATGACGGAGGGCGCGAAAGGCGCTCATGGGCTCCATGGAAACACCATGCACCAAATGGAGGGGCCCCCCCTTGGGCGACCCCATATTTGGCGCCGTGGTGGGTTAGCGCCGGTCTAAGAGGTGGAAACCCCCGTTCCGGGCGCCTGTGCGAACCCGGAAATCTAAAATTGTTCTTCCGTTCAAAAACCCTTTCTTGTGCCTGCCCTGGTCCCTGCCCCTGGGCTAGTCCCCCCAGGTGCAAAATGGTTGGAGTGCAGTTTCAGAAACCCAGTTCACGTGCGTTTTCCCCGCGAAGTCAATGGCCCGTCATTCCCAACCGTTGACCTTTTGCCCGAAGTGGCCAAAAGGGGGGATTCCCAAGTGCGTTTTAAAAAAGGAATTCGAAATATAATTCTCGTTGTCTTTTGGGAAGCCGGGACCGGAGTTCGGAGTATTAGTCTGAAATCCGAGATGACTTGGGCGTCGGCAAGGTTTGGAATCAGAACGTTATGCTCGAAGATGGTTAACTAATGGCTAAGCAGGTTTAAGAGAAATTAAATCAAGCGCTGGGTGGGC | |||||||||