| mature miRNA: TTGTTGGGGAAGCTTCTGGAC species: Triticum aestivum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|222360658|gb|GH721061.1|GH721061 AZO1.102D11F010126 AZO1 Triticum aestivum cDNA clone AZO1102D11, mRNA sequence TTGTTGGGGAAGCTTCTGGAC EST sequence (targeted fragment marked with yellow): CCCACGCGTCCGATCTGAAGATGGAGGCTGCGAGAACATTCCAAAGTATCTACTTGATGCTACAAAGCTTTGTAGCAAACCAGCTTCTTGATTGTCCAACTGCAGAGGACACAACTCAAGTCAAGCTCTTATTTGGAGCAAAAGGGACTGTCAGCATCCAAGGCAAGTGTGTTGGAGGTGAGCGCAGGGTTGCAATTTATCGGATGGAGAGGGGTGTAGAAAAATGGACAGTTAATTGTTCATGTGGAGCGAAGGATGATGATGGTGAGAGGATGCTATCTTGTGACTCATGCCATGTGTGGCAGCACACTAGGTGTGTTGGAATTAGTGATTTTGTTCAGGTGCCGAAGAGATTTGTGTGTGCATCTTGTAAATTACTCCACAAGTCTAAGATGTATAGTAGTTTCCCTAACAAAAGATGTAAGACTGGCTCTTTTAGTCATGCCAGTAGTGGGTTGTGGAGGCCCAACATCAGTTAACATGTACATATCGACAACAATGAGTTCCTAATATGACAGATGCAAGTTTTGCNNA | |||||||||
gi|222368383|gb|GH731410.1|GH731410 GR45.120N02F010719 GR45 Triticum aestivum cDNA clone GR45120N02, mRNA sequence TTGTTGGGGAAGCTTCTGGAC EST sequence (targeted fragment marked with yellow): CCACGCGTCGGAAAAAGGCAAAGCGCCGCCCGGCGAAAGCGGCGTCGGCGGCGATGTTGCGGCAGATGCGATGGCTGACGGACAGGGAAGGGAGGTGGGAGCTGACGTGGAGTCCCCGGCGACGATGGAGGGCACGGCGCGCCCGGTCCCGGGCGACCCGCTGCCCCTCGGCCTCTCGCGGGGGCCCCGCGTCACCCGCACCAAGCAGCTCGACTTCTTCCACCGCTTCATGGCCTCCCCGCTCGTCCCCTCCTTCTCCGCCTCCCGCGCCGGCCTCTCCCTCCATCACGCGCACCTCCTCCATCTCGCCCACAACTGGTCGTTTACTATCTTGGAGCAGCTTCATGTACAGAAGCTTGTGACAGTCGTGAAAGAGAAGTTGTCAAATCGGCAAGAAGGGGTCCCCTGGTCCAATGATCTCAAGAGGCATTTGCATGATGTCATTTCTCTAGGTGCTGGCACGGAACTCTTGATCACACCAGACACGGCATTGCTGCTGGAGTTGTACAATATCAACAAGGGGGACCGAGGCAAAGCGATTATTCACCACAAGCTTCCTCAACAAAACCTTACATTAGCAGCGTCCNGGCCTGGGTTATTGGTGATAAACAGGGGGTGTACTGGGATGAGCCTTATCATGGTCAGTGATCTGGCTTCAGTCGGCT | |||||||||
gi|222361252|gb|GH722849.1|GH722849 AZO3.100B04F010925 AZO3 Triticum aestivum cDNA clone AZO3100B04, mRNA sequence TTGTTGGGGAAGCTTCTGGAC EST sequence (targeted fragment marked with yellow): CCACGCGTCCGTGAGTTTCCCCACCAAGGGAGTCTGCGACATAAAGAGCTCCAGACCTTTGAGTTATATCTTACGCGTGCCGAAACTAAATACCGACGTCATAACATGGTTATTTTTTTGGGCCAGATGAATCAAGTAACAACCTTCTCTTGGGCGATTAGCCATATCCCGTCAGAAGTGATTAACATATTTGCAAACATGCCTCATCTTGTCAATATTTATCTCAACAAATTTAGTGTGCTCAAGACGATCCCCGCTAAGTTCCCACAAAGCCTACGGTGTCTTGTTCTATTTGCTGATATCATTGAACAAGATCTGATGCCAATGTTGGAGAAGCTTCCATCTCTTGTGGTGCTGGAATTATCCGGATATCGTGGCCGAATCATGTCCTGCTCTGCCAAAGGGTTTCAGCGCATGCAATCGCTAAAACTTGATGAGTTCTCCATTGAGGAGTGGCCGATGGATGTTGGGTCGATGCCAAGGCTTTCCCACCTTGCACTTCGGAGATGCAGGCAGATAGAGAAGCTCCCCGAGGGGTTGTTGCATGTTCGGCTCCTCATCGGTGATATTGAACTGTTCAATGTGCCTCAGAATACCGAAGATGATAATATATTGTATGAGCTGCAAAGGAGAGGAT | |||||||||
gi|239861716|gb|GR303930.1|GR303930 WRIS_3325 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis TTGTTGGGGAAGCTTCTGGAC EST sequence (targeted fragment marked with yellow): GTTGGTACCCGGGATTCGGCCATTACGGCCGGGTGAGAAAAAGCTGGGCACAGATGAGAAAACCTTCATCCGCATCTTCACTGAACGCAGCTGGGCACACATGGCAGCTGTTGCTTCTGCTTACCATCACATGTATGATCGGTCGTTACAGAAGGTTGTGAAGAATGAAACATCTGGAAACTTTGAAGTTGCTCTGTTAACTATCCTCAGATGTGCTGAGAATCCAGCGAAGTATTTTGCTAAGGTGTTGAGGAAGTCCATGAAAGGTCTAGGTACTGATGACAAGACACTTGTAAGGGTTGTGGTGACAAGGACTGAGATTGATATGCAGTATATCAAGGCAGAATATTACAAGAAATACAAAAAGCCGTTAGCTGATGCTATCCATTCCGAAACATCAGGCGGTTATCGGACGTTCCTGCTTTCTCTTGTTGGTAGCCATTAGGCTATGTTTCCTCGACCGTACACGCTGCTCTGTTGCATTACTTTACCCTAAAGGCCTAAGCACAGTGACTCTACCTGGCCAAAATGTATGACGTCGTCATCACTGTGTTCTGGAGCTTCCCTGACAACTATTTCTGCTTTCTCTTGGTTTATGCTTGCCTAAAATGTGTGTATATATTATTTGGATCTGGGGACTCTAGTGCAGTGGCTGCCGCTGGTTCCATCTTTCATGGCATGTGTTATCAGTGCAGTTGGTTTGATGATTGTATTTGGCTTTACTGCTTTCACTGAAGTTCACTGTTATTTTACTTTATT | |||||||||