| mature miRNA: TTGTTGTTTTACCTATTCCACCC species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|208157542|gb|GD953722.1|GD953722 454GmaGlobSeed696371 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TTGTTGTTTTACCTATTCCACCC EST sequence (targeted fragment marked with yellow): GATGGAAGTGGAGGGATAGGTAAAACAACTACTTCTGTAAAAGTAATTGTTATAGTTAGTTGTTGTTTTACCTATTCCACCAATTCCATCTATCCCTTCCCTTCAAGTTTTCTGATTTCTTCTGAAGAAGGCAAGTATAGTGGGTTTTTACTCCGGTTTTGTCTTCCAATAAATTGATTTTAAGATTTTTAACTGAAGTTTTGTTTGGTTATT | |||||||||
gi|193487248|gb|FK452257.1|FK452257 454GmaGlobSeed186889 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TTGTTGTTTTACCTATTCCACCC EST sequence (targeted fragment marked with yellow): GGAAAGAGGGTAAAAGTGGAGCGCACATAGCACTACTCATAAAGGGGGGAATAGTTAAAACAGTAAAAAAAGTAAAAGGAGATTAATTCCTAAGCATTACAAGCTAATATAATATGTCCTACTATTAGGAATAGATGAAAACGGAGCTAGGAACAGAGGAAAACAGAGCTA | |||||||||
gi|208166780|gb|GD964614.1|GD964614 454GmaGlobSeed707263 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TTGTTGTTTTACCTATTCCACCC EST sequence (targeted fragment marked with yellow): GGTGATTGAAATAGTGCTATTCACGCTCCACTCTGTCTCTTTCTGTCTCTGCAATCTCTGCATCCCCTGCTTTGACAAAATTGTTGGGAAAGAGGGTAAAAGTGGAGCGCACATAGCACTACTCATAAAAGGGGGGAATAGTTAAAACAGTAAAAAAAGTAAAGGAGATTAATTCCTAAGCATTACAAGCTAATATAATATGTCCTACTATTAGGAATAGATGAAAACGGAGCTAGGAACAGAGGAAACAGAGCTAGAAACAGAGGA | |||||||||
gi|254339769|gb|GR857894.1|GR857894 CCCC21790.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC2179 TTGTTGTTTTACCTATTCCACCC EST sequence (targeted fragment marked with yellow): ATGGCGTTAGAATTCGTTGGTGGTGCTGTTCTCTCTTCTTTCCTTCAGGTTACATTTGACAGGCTGGGTTCTCATCAAGTTCTGGACTTCTTTCGTGGAAGAAAACTCGATGAGACGCTACTGAGCAAGTTGAAGGTGAAGTTACTGTCCATAGATGCTCTAGCTGATGATGCAGAACAAAAGCAGTTCAGAGATTCACGTGTGAAAGCATGGCTTGTTGCTGTCAAAGATGCGGTGCATGAGTCAGAGGATGTCTTGGATGAAATAGAATACGAACACTCCAAATGCCAAGTGGAAGCTGAACCTGAATCTCAAACCTGTACTTGCAAGGTACCAAATTTCTTCAAATCTTCTCCTCTTAGTTCCTTTAACAAGGAAGTTAAATCAAGGATGGAACAACTCATTGGCAGCCTAGAATTTCTCTCGAGCCAAAAGGGTGATCTAGGTTTGAACAATGCTAGTGGTGTTGGATCTGGATTCGGTAGTGAAGTGTCACAGAAATCACCATCAACATCTTTGGTGGTTGAAAGTGTTATTTATGGCAGAGATAATGACAAGGAAATGATAATTAATTGGCTCACTTCTGACTCTGGCAACCACAGTAAGTTATCAATACTTTCTATTGTGGGTATGGGCGGAATGGGTAAAACCACACTTGCCCAACATGCATACAATGACCCAAGGATAGATGATGTATTTGACATCAAAGCTTGGGTCTGTGTTTCAGATGATTTTACTGTTTTCAAGGTAACAAGAACA | |||||||||
gi|192307056|gb|FK000020.1|FK000020 GLPAE25TR JCVI-SOY1 Glycine max cDNA 5', mRNA sequence TTGTTGTTTTACCTATTCCACCC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTGGGAAACTAAGGTTTGATGATTTCACCTTAAATTTCAACAAGCAAACTAAGAGGGCACCTGAGATTATAAGCCCCTATTACACTTTTTTTAACCGCTAAAGAGCGCCCAGCTCCTATATAATAGATACCTAACATTCCCGAATTTCTCAGTAACTTTCTTTCTATGGGTGATTGAAAATAGTGCTATTCACGCTCCACTCTGTCTCTTTCTGTCTCTGCAATCTCTGCATCCCCTGCTTTGACAAAATTGTTGGGAAAGAGGGTAAAAGTGGAGCGCACATAGCACTACTCATAAAAGGGGGGAATAGTTAAAACAGTAAAAAAAAGTAAAAGGAGATTAATTCCTAAGCATTACAAGCTAATATAATATGTCCTACTATTAGGAATAGATGAAAACGGAGCTAGGAACAGAGGAAAACAGAGCTAGAAACAGAGGATCATAACTCTATCAGTCTAACTCCTCCTTATGGTGGGGTTTTTGGTGTCATGGAGAAAATCAAGCAAAACGGTGCTTTTGCATTTGGGGCACTTTGGATCATCCTCAGAGAGCATCACATACATGAGGCAGCGAGGG | |||||||||