| mature miRNA: TTTAAATGCCTTAAATTCCCGA species: Picea glauca database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|211884705|gb|CK438377.2|CK438377 GQ0085.TB_O16 GQ008: Cambium, phloem and bark of girdled saplings Picea glauca cDNA clone GQ TTTAAATGCCTTAAATTCCCGA EST sequence (targeted fragment marked with yellow): TCATACTTTATGACAACATGTGGGATGATGGCAACTCCTTGGGTCCTAAAGAAGTGCACAACTATCTCAATCGGTTGATGTACAACAGGCGAAATAAATTTAATCCTCTGTGGAACACACTTGTTTTGGGTGGAGTCAAGAATGGTCAGAAATATCTGGGCACGGTCAATATGATAGGGGTGCATTATGAGGAGAACCATGTTGCTACTGGATTTGGTAATCATCTTGCTAGGCCAATTTTCCGTGATGAATGGCATGAGGATATGACCTTTGAAGAAGGTGTCAAGCTTCTTGAAAAGTGCATGCTTGTGCTTTTATATCGTGATCGGTCTGCTGTTAACAAACTACAGATAGCAAAGATCACAGAAGAAGGAGCCACAATTTCTGAACCATATGCTATAAAAACACATTGGGAACTTGAGGCATTCAAGAACCCAGCGACAGGAGCTGTAGGTTCATGGTAACGAGAAACAGTGGTCATGCAGTTGTCTCAATTGCTGAGACTAATTGAAGATATCAATATACTTCTAATATGACTGGCCAGGCTGAAAATGGATTTCTTACTCATTTTTTTAGTATCAAACAGGCCCCTTTATCATAATGTTCTTTGGAAGTTAGCTTGGAGTCGGATGTTGAAGCAAATATGAGTCAGCTGCATTCCAATTTATCTATGTTGAATGACATCATAAAAATGATAGAGATTTCCTATGGTCAACTTTGTAATCTTTCAATAA | |||||||||
gi|225920089|gb|GO369149.1|GO369149 GQ03907.SP6.r_O11 GQ039 - Stem - Dormant Picea glauca cDNA clone GQ03907_O11 3', mRNA sequen TTTAAATGCCTTAAATTCCCGA EST sequence (targeted fragment marked with yellow): TTCCAGGAGATAGTACGTTATCTTGATGAACTCATACTTTATGACAACATGTGGGATGATGGCAACTCCTTGGGTCCTAAAGAAGTGCACAACTATCTCAATCGGTTGATGTACAACAGGCGAAATAAATTTAATCCTCTGTGGAACACACTTGTTTTGGGTGGAGTCAAGAATGGTCAGAAATATCTGGGCACGGTCAATATGATAGGGGTGCATTATGAGGAGAACCATGTTGCTACTGGATTTGGTAATCATCTTGCTAGGCCAATTTTCCGTGATGAATGGCATGAGGATATGACCTTTGAAGAAGGTGTCAAGCTTCTTGAAAGTGCATGCTCGTGCTTTTATATCGTGATCGGTCAGCTGTTAACAAACTACAGATAGCAAAGATCACAGAAGAAGGAGCCACAATTTCTGAACCATATGCTATAAAAACACATTGGGAACTTGAGGCATTCAAGAACCCAGCGACAGGAGCTGTAGGTTCGTGGTAACGAGAAACAGTGGTCATGCAGTTGTCTCAATTACTGAGACTAATTGAAGATATCAATATACTTCTAATATGAATGGCCAGGCTGAAAATGGATTTCTTACTCATTTTTTTAGTATCAAACAGGCCCCTTTATCATAATGTTCTTTGGAAGTTAGCTTGGAGTTGGATGTTGAAGCAAATATGAGTCAGCTGCATTCCAATTTATCTATGTTGAATGACATCATAAAAATGATAGAGATTTCCTATGGTCAACTTTGTAATGCTTTCAATAATTTTATTTTCTTGAGCAAAAAA | |||||||||
gi|211890232|gb|DV982044.2|DV982044 GQ0165.B7_E21 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone TTTAAATGCCTTAAATTCCCGA EST sequence (targeted fragment marked with yellow): CAGAACAGACAGAAAATGGCGTCGGTCACCACTCAAGCCACTCTCGGCGTATCGTGCCGGTCAGTTTGCAGGTCGGGATTCCTGACAGGCTCATCTGTTTCTCGCCTGGCGAGACGCGTCCGCCCGGGATCGAACCCCGCACCCGCCAGATCCTTCAAGGTCGAGGCTAAGGGGGAGTGGCTGCCAGGTCTCTCCTCCCCGACCTATCTGAACGGCAGTCTTCCTGGAGATAACGGGTTCGATCCTCTGGGCCTCGCAGAGGATCCGGAGAGCCTGAAATGGTACGTCCAGGCGGAGCTAGTGAACGGTCGATGGGCGATGCTGGGCGTGGCGGGGATGCTCATCCCGGAAGTGCTAACAAGCTTTGGCTTCATTGACGTCCCCAAGTGGTACGACGCCGGCAAAGTGGAGTACTTCGCGTCCTCGTCTACGCTGTTTGTGATAGAATTCATTCTGTTTCACTACGTTGAGCTCAGAAGATGGCAGGACATTAAGTACCCTGGGAGTGTGAATCAAGATCCCGTGTTCAAGAATTACAGTCTTCCTCCCAACGAAGTGGGCTATCCTGGCGGCATCTTCAACCCCCTCAATTTCTCCCCGTCCATGGAGGCCAAGGAGAAGGAGCTCGCCAATGGGAGGTTGGCGATGTTAGCATTCCTGGGATTCGTAGTACAACACAACGTAACAGGAAAGGGTCCGTTCGAAAACTTGCTGCAACATCTGTCTGATCCGTGGCACAACACCATTATTCAAACCTTCCAAGGAAAGTGAGACTTCCACTACTGTGTGTCTTTGAATGTAATATTTGGGCTTTAAGGTATTTAAACTTATGGGAAGTTCTCTGTCAAAAAA | |||||||||