| mature miRNA: TTTCCAATTCCACCCATTCCTA species: Solanum lycopersicum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|225391496|gb|FS195698.1|FS195698 FS195698 Solanum lycopersicum cv Micro-Tom root Solanum lycopersicum cDNA clone LEFL3107F20 TTTCCAATTCCACCCATTCCTA EST sequence (targeted fragment marked with yellow): ATTTCTTCTTTTTGCATATTTAATTTTTCATATGGAAGAAATTTAAATCCTAATTTTAGAGTTAAAGCTGTTAATCTTGGTGGCTGGCTTCTTACTGAAGGATGGATTAAACCTTCTCTTTTTGATGGCATCCCTAATAAAGATTTTCCGGATGGGACTCAATTGCAATTCAAATCAGTAACAGTAGGGAAATATTTATGTGCTGAATTAGGAGGAGGAAATATTATTGTTGCTAATAGAACAGATGCATCTGGATGGGAAACATTTAAAATTTGGAGGATAAATAGCACCACATTTAATTTTAGAGTATTTAACAAAGAATTTGTGGGAATTGATGGAAGTGGAAATGTTGTAGCACTTGAAAACAAAGCTGGAAATTCAGAGACTTTTGAGATTGTAAGAAATTCTGATGATCCAAATCGTGTAAGGATTAAATCAACAAATGGTTTCTTCTTACAGGTAAAAACAGAAGNACTAGTGACAGCTGATAATGGAGGTAATGGGGGGTGGGGTGATGATGATCCTTCTGTTTTCATCATCAAAACTAGT | |||||||||
gi|225411401|gb|FS199569.1|FS199569 FS199569 Solanum lycopersicum cv Micro-Tom root Solanum lycopersicum cDNA clone LEFL3139J16 TTTCCAATTCCACCCATTCCTA EST sequence (targeted fragment marked with yellow): ACCTAGTAAAGGGTGGAATGGGAAATGTTTTGAAAAAAAATGTGATAATTGGTGCAAAAATAAGGATCATGAAGATTATGGAGATTGTTACAAGGGTTATTGTTATTGCTATTATAAATGTTGAAAAAATAAATTAATGAAGCACAATATAAGGCCATANGACTTTACTTATGGCACAATGTGTCTTATATAATGTATGATTGAATAAATGTTTGTGATTACATGTTGATATCGAAAAAATAATGATCATAAATTATTTATGGTCTAAATATTTGTAATTTGATGTTTTATCTATGAAAGATATGGTATTAAAAAAAAAA | |||||||||
gi|225413902|gb|FS199551.1|FS199551 FS199551 Solanum lycopersicum cv Micro-Tom root Solanum lycopersicum cDNA clone LEFL3139I15 TTTCCAATTCCACCCATTCCTA EST sequence (targeted fragment marked with yellow): TATATATTAATTAGAAAAATGGCTAGCAAAATTACTTTCTGTGCTCTACTCTTTTGCTTTTTCCTCATGTTTGCTTCTGAGATGCAGATAACAGAAGCAAAATACTGTAGAAAACCTAGTAAAGGGTGGAATGGGAAATGTTTTGAAAAAAAATGTGATAATTGGTGCAAAAATAAGGATCATGAAGATTATGGAGATTGTTACAAGGGTTATTGTTATTGCTATTATAAATGTTGAAAAAATAAATTAATGAAGCACAATATAAGGCCATAAGACTTTACTTATGGCACAATGTGTCTTATATAATGTATGATTGAATAAATGTTTGTGATTACATGTTGATATCGAAAAAATAATGATCATAAATTATTTATGGTCTAAATATTTGTAATTTGATGTTTTATCTATGAAAGATATGGTATTAAAAAAAAAA | |||||||||