miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TTTCCTACTCCTCCCATACC
species: Gossypium hirsutum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|164291405|gb|ES807215.1|ES807215 UFL_637_29 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
|||||.||.||. ||| |||
AAAGGGTGGGGGAGGTCTGG

EST sequence (targeted fragment marked with yellow):
AGTGGGATCCAAGAATTCGGCGCGAGCCAAATCTTTGTCTTTGAAGTTTCCGCTATCCTTATTCCCCAACTACCCCGCATCATCGGCGGGTGGCGCTGCTGCCCGATTTCCAAGCCTTTCTCCTCGTTCAATCCGGTTCTCTATTTGCAGTGACGCCTCGAGGGCGTCGAGGGGAGGTGTTTCTTTATCTAGTCGTGATCGGAACTTGGTCACCATGGCTGGGGCTGATGAGTTTGTCAAAGGAAATGTTCACCCGAACGGGGTTGCTGTCATCACTCTAGATCGTCCCAAAGCTCTCAATGGCATGAATTTAGATATGGATATCAAGTACAAGCAAATTCTTGATGAATGGGAATCGGATCCAAAGGTCAAATGTGTTTTGATCGAAGGGAGCTCACCACGTGCCTTTTGTGCAGGGGGGGATGTGAAGCAGATAACAGAGAAAAACAACCTATCAGATATGATTGAGGTTTTTACTGCAGAGTACTCTCTAATATGCAAAATTTCCGAGTACAAGAAGCCCTATATATCGCTTATGGATGGCGTAACAATGGGCTTTGGCATTGGCCTATCCAGTCATGGTCGTTACAGCGTGGTAACTGAGAGGACTGTTCTTGCTATGCCGGAAAATGGAATCGGTTTATTTCCCGATGTTGGGTTTTCATATATAGCAGCACAAGGTCCTGGAGGGGGTTCTGTTGGTGCTTATCTTGGAATGACCGGGAAAAGGATATCAACACCTTCAGATGCACTATATGTAGGGCTTGGAACACACTACGTGCCATCTGGGAATCTAGGTTCACTGGAGGAAGCCCTTCTGTCAAGTACCTTTTCTGAGGATCCAGACAAGGATCTTACAACATTGGTTGGCAAGTACTGCAGTAACCCCGAGTCTGAAGCTCACTTGAAGTGGCTTTGCCTCAAATAAGTTCATGCTTTCGTGGAAATAAGTCAGTTAATGAGAACATCGAAGAGGGTAAAAAACATCTGGCAAGCACAGAAACTTTCGGGGGCAGAGTGGGGGAAATGGGGGTCTGGAGGGGGTGGGAAAGGGGGGGCTCCTTTTTCCTCTTTGGTTTAACAAAAAAATAATTTTCCTCCTCGGGGTTTGATTCCGGGGAAATTGGGGAAAAAGGGGGGGGAAGGGAAAATTTTACAAACCGCCTAAAAAAGGGGGGGTTTATGAAGAAAACCCCAAAAATAATCCCGCATTTGGGCCTTTTTCGGGGGGCTTTTTTTTTTTGGGAAAAAAAAGAGATTTTTTTGTGCCGGAAAGGGGGGGGGTCCCCGGGTGGGGGGGGTCTTTTTGTGGGGGTGTGGGTAAAAAAAAAAAAA



gi|164256808|gb|ES838696.1|ES838696 UFL_046_11 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
|||||| ||||.||| | ||
AAAGGAGGAGGGGGGGAGGG

EST sequence (targeted fragment marked with yellow):
GTTGTGGGTGGGGGGGGTGGCGTGCGCGTGGGGGGTTAGTTATCTTAGTGTGGGTGTTCCTAAAGTATTTTTTGTGCGTCGGAGGGGATTTATCTTTGTGTTGGTCCCCTCATAGATAGAGGGGCGCGCCGCCACCAAAACGCGCGCGANCAGAGAGGACGACGGGAGGAAACGTCCCTTCTTAGAGGGAGAGGNCGCNGGTGTTGGNGACNNAAGNGGANAGTGGGNAGGAGGGGAGGAGAAGAGGGGGGAGGAGAAGGAGAAAGGAGGNGGGGAANGTTTTTTTCTTCCAAGAGAGGGGGGNNGCGGGGGGGGGNGNNNGGNNGGGGGGGNGGGNNGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGAGAAGAGNAAGGGGAGAGAGGGGANAGGGAAGGNAGGAGGGGGGGGGNAGAGNAGGAGGGAGGGGGNAGGGGAAGAAGAGAAGGGGGGGAAGGGGAAAGGGAGGGAGGGGAGGGGGGGGGAGAGAGGGAGGAGGGAGAGGGAGGAGGAGGAAGANGAGGAGGGGNAGAGGGGGGGGGAGAGAGGAAGGGGAGAAGAGAGGGAGAGGAGGGGGGGGGAAGGAGGAGAGAGGGAGAAGGANAGAGGGGAGGGGAGTTGTTTTAGNGAGGGGAGAGGAGGGAGGGGGGGAGGAGGAAAGCGGAAGGGTTTTTTTTGGGGGGGGTAATTTTTCTTCTTTTTTTTGTGGAGTGTGTGGGTGTGTTTTTTTGGTTGGTTTTTGGGGTTTGTTGGTTGATGTGGGGTGGGGTGTTTGTGTGTTGGGGTTGTTGTGGTGTGTAGTTGTGTTTGGGGGTTGNGTTGGGTTTGAGTATGNGTTGGTTGATTGTGTTGTGTGTTTTTTGTTTTTTTTGTGTTGTGTTTGTTGTTGTGTTGTGTGTTTTTGTTGTTGTTTTTGGTTATGTGTTTTTGTTTGTGTTTGTGGTTGTGTGTGTTGTTTGGTTGGNTTTGTGTGTTGTGTTTTGGTGTTGGGTTGGGTTGTGTGTTGNGTTGGGTTGTTGTTTTGTTGTGTTTTGATGTTGTTGTTGGTGTGTGTGTGTGGGTTGGTTGTGGGAGTGGTTAGTGTGTGTGTTGGGTTTGGGGGAGGGTTGTGGTTGTGGTGTGTGGTAGTAGTGTTGTGGGGTGTGTGTGTTGTGTGANGGTGGGATAGTGGGTGAGTGGGAGTGGGGGATTGTGGGATGGGATGGTGGTTTGGGTGTTTATGTGGTTGTGGGGTTATTTGATTTGTGTTGGTGGGGGTGTTGTGGTGTGTGTGTTNTTTGTGGAGTTGTTGGTGGTAGTGTGGTTGGTTTGTAGGTTTGTGGTGGTGTGTGT



gi|164305114|gb|ES808611.1|ES808611 UFL_190_84 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
||||||||.|||||| | ||
AAAGGATGGGGAGGGAAAGG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGAGTATCGAAAAACGCCTTTCAAGATGATCTAAAGAAAGCTTATAGAAAAGCCGCTACCTATAATCATCCCGATAAAGGCGGCGATCCTGAAAAGTTTAAAGAGTTGGCTCAAGCTTATGAGGTGCTGAGTGACCCGGAGAAGCGTGAGATTTATGATCAGTATGGTGAGGACGCCCTTAAAGAAGGGATGGGCAGCGGTGGCGGTGGCCATGACCCTTTCGATATCTTCCAGTCATTCTTTGGTGGCAATCCTTTTGGTGCTGGTGGAAGCAGCCGAGGCAGAAGACAAAGAAAGGGGGAGGATGTAATCCATCCCCTCAAGGTATCATTGGAAGATCTCTACAATGGAACATCGAAAAAGCTTTCTCTTTCACGAAACGTAATATGCTCCAAGTGCAAGGGCAAAGGGTCTAAATCAGGTGCATCAATGAAATGTACCGGTTGTCAAGGTTCAGGAATGAAAGTCTCCATTCGGCACCTCGGTCCTTCCATGATCCAACAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGTGAAACCATCAACGATAAGGATCGTTGCCCACAATGCAAAGGTGATAAGGTTGTGCAAGAGAAGAAAGTCTTGGAGGTTATTGTTGAGAAGGGTATGCAGAATGGACAAAGGATTACTTTCCCAGGAGAAGCTGATGAAGCGCCCGATACGGTTACTGGGGACATTGTATTCGTCCTGCAACAGAAAGATCATCCTAAATTTAAACGAAAGGGTGATGACTTATTTGTAGAGCATACATTGGCACTTACTGAGGCCCTTTGTGGCTTTCAGTTCATACTGACTCACTTAGATGGGAGACAACTTCTCATTAAAACCCAACCTGGGGAAAATCGTTAACCCTGATCATTTAAAGCAATAAACGATGAAAGATGCCGATTTATCAGAGGCCATTTTTGAGAAGGAAACTGTTAATCCGTTCCTGTTGAATTCCTGACTCGTGACCCCGAACGGGGAAGGGACTAGAGGTGGGCTTTCTCCCAGGGATCGGGCCACCTGAATGGAATGGACTGGGTGGATTGGAAGGAACAACCCTGGTTGATGGTAACTTTGGGGAAAGGGAGGGGTAGGAAAAAAAATCACGGCTCAACAAAAAAGTTTTTGAATAAAAAAAGAAGGAAAGGGCGGGGGGGGGGGGGCAAAAAAAAAAAAACAAGGGGCCTTCAACAAAGGATAAAAAAAAAAAGACCCAAAAGGGGTCGCAAAAAACAACAAAAACGGGGGGGGGTTTT



gi|164267255|gb|ES812267.1|ES812267 UFL_241_51 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
|||||.||.||.|||| | |
AAAGGGTGGGGGGGGTCTAG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGGCATCTTCACCCTTTCAATTCTCCACTCCAGTTCTCACTCTCCTATTATCATCGCCGTCGTTACGAAAATCCCCTTGTCTTCCTTTCCATCCTTCATTATTCTCGCCGCCCCTTACCCAGAAGACCCTCACTTTCTCGACTGGGACTAGAGCCGTTTCGGGGTCCGGAAAATCCCCTGGTCTTCCTTTCCGTCCTTCATTATTCTCGCCGCCCCTTACTCAGAAGACCCTCACTTTCTCGACTGGGACTAGAGCCGTTTCGGGGTCCGGGAAGTTCTGTTGGAGAGCCAAGGCGTCGATGTCCGGGACCACCATGGAGAAAGGGAAAGGGAAAGTCGAAGTTATTGATTCCAAGGAGAATCTTTCGGTTTCGCTCGCTAAATACACCGCCGATCTAGCAGCTAAGTTCTCCAAAGAGAAAGGCAGTTTCACCGTGGTTTTGTCTGGCGGCTCCCTCATCAAGTCTCTCAGGAAACTAGTGGAACCCCCATATGTTGATGCGATTGATTGGTCAACATGGCATGTTTTCTGGGTGGATGAAAGGGTTGTTCCTAAAGATCACGATGACAGTAACTATAAGCTAGCTTTTGATGGGTTCTATCAAAGTACAGATTCTCCCTGGTATGTATACGCCATCAATGATGCACTGTCTGCTGATGGTGCACCCGAAGATTATGAGACTGGTCTCAGGCACTGGTGGAAAAGCAACGGGCTTAGTGTCTCAACAGCTACGGGGTTTCCTAAGTTTGATCCCATGCTTCTCGGATGGGGACCGGATGGAACCTGGGCTTCCCTCTTTCCTGGCCATCCCTTGGTGGAGGGAAAACAAAAAAGGGGTTACCTTTCTTTAAAGAATCCCCAAAACCGGCCCCCAAAAAAAATTCCCTTTACTTTCCCCAATTTTCAATCTCTCTGGTCCAATTTGAATTTGGGATCTGGGGGGGGTGGGAAAAGCTGGGTGGGGGGGAATTCCCCCTTGGGGAAAATAGCCAAAATTCCAGAATCCACTGCCCTGGTTCGAAAGGGTTTCACCCGAAGGGGGATTCTTGGTTTGGTTTTTTGGAAAAAAAAGGAACCTTCAAAAACTATAAAGTTTTGGAACCCAAAAACTTATTTTGGAGTTGTTACTCCGAGAAACTTTTTTTTGGAGGGTGGGTAAAAATGGGGAGGTTAAGGGGGGCGGAAAAAAGAGGTATGTGGGGTTCCCCGGAAAAATTTTTTCTCCCCCCCCTTAAATTTTTTTTAAACAAAAGAAAACAACACATTATTTTCTTTTTTTTTT



gi|164351053|gb|ES847934.1|ES847934 UFL_149_52 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
..||||||.||.| ||.|||
GGAGGATGGGGGGCGTGTGG

EST sequence (targeted fragment marked with yellow):
GAGAACTAGTCTCGAATTTTTTTTTTTTTTTTTTATATAAACTATTGACACAGCAGTCTCCTTTACGATCATGTGATCGACATAAAGACTGACACTGAAGGCAGAAACAGAAAGAGAGAGAGAGAGAGAGAGAGAGACATAAATCCAACACTTTGAGAACCATAAATTCAATGGGACGCAGCAAACTAACTAATGATTCTCAAAAACAGAATCATAATTACGAAGACCATATGCCACAACGGTGAGTCAATTGCTAGTATGATCCAGGGCAAATCTCCCAATCACCCAATGAAGTGTAAAAACAAGAAGAATCGATCGTTAGTTTTGCAGATTCATCGTCTGAAAACAAGTAGCTTTAACACCATTCTTAACATGCCATATATATCACCAAGTACCATGGTCTCTCGCTGGCTGTGTCTCCCAGCCCCAAATTCTTCCTCGCATGAACTCTCACAATCGTGAACAATTTGTGACGGCTCTACAACCCTAATTAATCATCAACCAAATGTGCCCAAAATTTACCCCTAATTCCCTGACCCTAAAGCTGCACCTAAAAACCCTCTTCCACATCCACGCGCATCAGAACCGAGCTATATATATATACTCCCGACGACAGGGGTAAACTTGGCCAGCCAAATTCAGCGAGGATCCGCCCCTCTCCAACCCGAACTTCGCGGAGCACCCGACAACGAGGCTAACAAGTTCAGAGGACCAGGAAGATAATTACCGGCTCGAGGCGGCCAACGCTTCTCCCAATCGGTGGGGGGGGGGGGGGCGAACAAGCGCGGGCAGCCGGGGTGAAGGGCCCGCCAGCTCCGGTGGGGGGGGGGGAGCACCCGCAATGGGACGAGAGGCGGGTCCGGGCGGGAAAGAGCCAAAGATCCCCCGCGGGGGGCCCCGGGAATGCGGGGGGCCAACGAGGGGGGCCCGGGGGAAGCGAGGTGTGCGGGGGGTAGGAGGGGGGCGGAGCCGGGGGGGGGTGGCGGAGGAAGAGAGGGGGGGGG



gi|109888699|gb|DW517668.1|DW517668 GH_TMIRS_213_F12_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTTCCTACTCCTCCCATACC
||||||||||| ||| | ||
AAAGGATGAGGCGGGAACGG

EST sequence (targeted fragment marked with yellow):
ACCCACCAAAAAACCTCCCCAAAGTCTTCCTCCTTTCCTTTCTCATCCTTCTCAAGTTGCGTCCCCGAAGATAGGCCGTTTGCGGTAATGGGTACTCCTCTCCCTCGTGAATGGGTCGGCCTTCAACAATTCCCCGCTGCTACTCAGACGAAATTGTTTGAGTTGTTGGGAAAATTGAAGCAAAAGAATGTTAATACTTTGACTATCCTAGTTATGGGCAAGGGCGGAGTAGGAAAGTCTTCTACTATCAATTCTCTTATTGGGGAGCAAGTTGTTCGAGTCACTGCTTTCCAGTCAGAGGGGCTGAGACCCGTAATGGCTTCACGCTCCTGGGCAGGGTTTACATTGAATGTAATTGATACACCAGGATTTGTAGAGGCTGGCTATGTCAATCACCAAGCTCTTCAGTTGATCAAAGGGTTTCTTTTGAGTAAGACCATAGATGTTTTGCTTTATGTTGATTGCCTGGACGCCTATAGAGTGGATGACTTGGATAAGCAGATCATCAGGGCTATCACAAACAGTTTTGGAAAAGAAATATGGCGCAAAAGTTTGCTTGTTCTCACTCATGCTCAACTTTGTCCACCAGATGGACTGAGTTATGATGTTTTTTCTTCTAAAAGATCAGAGGGTGTCCTAAAGGCGATCCGTATTGGAGCTCGTATTAGGAAAAAGGATTTTGATGATTCTGTCATTCCTGTTGTTTTGGTTGAAAATAGTGGGAGGTGCAATAAAAATGACTGTGACGAAAAGATTCTTCTGAATGGTGATGCTTGGATCCCCAACTTAGTAAAAGCCATCACAAGTGTTGCAACAAATAAGAGTCAAGCTATTGTAGTTAGCAAGAAGCTGGTAGATGGGTCTGACGCTAGTGATAAAGGAAATTGTGGATTCAGTTATTCTTGGGCTTC



gi|164254748|gb|ES829632.1|ES829632 UFL_193_52 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
||.||.||||||||||. ||
AAGGGGTGAGGAGGGTGAGG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGCGCCCTGTGGCTCTCTTCTACCCTCGCATATCTCTTCAAGATCTGATCTGATCTGACAAAAAAAAGTTCGGGAGAGCACCAAAGAAAAGCGATAATACTAAATACTATGAGATATTGGGAGTGCCCAAAACCGCTTCCCAAGATGATTTGAAGAAGGCTTATAGAAAAGCTGCAATTAAGAATCATCCTGATAAAGGCGGTGATCCTGAAAAGTTTAAAGAGTTGGCTCAAGCTTATGAGGTGCTGAGTGACCCAGAGAAGCGTGAGATATATGATCAGTATGGCGAGGACGCCCTTAAAGAAGGAATGGGTGGAGGCGGTGGTGCCCATGATCCATTTGATATCTTCCAATCCTTCTTTGGTGGCAATCCTTTTGGTGGTGGTGGTAGCAGCCGAGGCCGAAGACAAAGAAGGGGAGAGGATGTAATTCATCCCCTAAAGGTTTCTTTGGAAGATCTCTATAATGGGATTTCCAAAAAGCTTTCTCTTTCACGCAACATAATTTGCTCCAAGTGCAAGGGGAAAGGGTCTAAATCACGTGCATCAATGAAATGTTCTGGTTGTCAAGGTTCAAGAATGAAAGTCTCCATCAGACACCTTGGTCCTTCCATGATCCAACAGATGCAGCACCCTTGCAATGATTGTAAGGGTACTGGTGAGACCATCAACGATAAGGACCTTTGCCCCCAATGCAAAGGTGAGAAGGTTGTTCAAGAGAAGAAAGTCTTGGAGGTTAATGTTGAAGAGGGTATGCAGAACGGACAGAAGATTACTTTCCCTGGAGAAGCAGATGAAGCACCCGACACAGTTACTGGGGATATTGTATTTGTCCTCCAACAGAAAGATCATCCAAAAATTTAAACGGAAAGGGGTGGTGACTTATTTGGAGAACATACGTTGACACTTACTGAGGCAATTTGCGGCTTTCAGTTTATACTGACCCACCTAGATGGTATGCAACTTCTCATTAAGACCCATCCTGATGAAGTGGGTAAGCTTGATCAATGCAGGGCCATAAATGAATGAAGGGTTGCTTATGTATCAAGGGCCTTCTTGAAGGGGAAAACTTACATTCCTTTTACGGTTATTTTCCGAATCCTTGGGCCCCAGAATGGAAAGGCCCCCAGGCGTTCCACCTTTAAGGGCCTCACCCCCCTAAAACAATGGAGTGGGAGGAGTGGGGAAAAAACCTTTTTTGAAGGCAAATTTTTAAAAAAAAAAAGAGTAGGAAAAGGGGCCAAAGGGCCTTAAAAGGCGCTTTTTAAAGAAAAAAAGAAAAAAATTGGGGGGGGGGGG



gi|164264497|gb|ES847246.1|ES847246 UFL_142_10 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
||.|||||.|||||| . ||
AAGGGATGGGGAGGGGGCGG

EST sequence (targeted fragment marked with yellow):
CTCGAATGGTTAGAGAACTTTTCGTTATGGCCAGGGAGCACGCTCCGTCGATCATATTTATGGATGAGATAGACAGCATTGGGTCCGCTCGAATGGAATCTGGAAGTGGCAATGGCGACAGTGAGGTGCAGAGAACAATGCTGGAGCTTCTCAACCAGCTTGATGGATTTGAAGCATCTAACAAGATCAAGGTTCTGATGGCCACCAATCGGATCGATATCTTGGATCAAGCTCTTCTTAGGCCAGGACGAATTGACAGGAAGATTGAATTTCCAAATCCTAATGAGGAGTCTCGTTTCGACATCTTAAAAATACATTCTAGAAGAATGAATTTGATGAGAGGGATTGATCTAAAGAAGATTGCTGAGAAGATGAACGGTGCTTCTGGTGCAGAGCTTAAGGCTGTGTGCACGGAATCAGGAATGTTTGCTTTGAGGGAAAGGAGAGTCCACGTAACACAAGAAGATTTCGAGATGGCGGTGGCGAAAGTAATGAAGAAGGAAAGCGAGAAAAACATGTCCTTACGGAAGCTATGGAAGTGATTATGTTTTATTATTTATTGTGCTTTCGCGGTTTTGGGGTAAATTCAAACAGGGAAACCCGAATTTAATATGTGAACAATGTGTAGAAAGTATTATATTGATTTGCCTGGCTGGGAGGAGGGGAAAAGAGGAGGGGAAGGTCGGGGTGCTTGCGAGACGGCCGCGGCCCCCTGGGATGTTCGGCCGGGGGGGGGGCGGGGGAGGGGTAGGGAATGCCGGGGAGGGGGGGGGGAGGGGGGAGTGGGAGTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGAGAAAGGGGAGGGGATAAGGGGAGATAGAGCGAGGGTTGGGAGAGAGGGCGGGGGGGGGGGGGGAGGATGAGGGGAAAGCGAGGAGGAGTCGGCCGGGAGGGTTGGGGGGGAGGCGTAGGGGGGGTGAGGAAGAGGGCCAGGAGTGAGTGGGAGGAGGGGGGCAGGGTTGGTTGGGG



gi|109848189|gb|DW477169.1|DW477169 GH_RMIRS_007_B03_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTTCCTACTCCTCCCATACC
||||||| ||||||| | ||
AAAGGATTAGGAGGGAAGGG

EST sequence (targeted fragment marked with yellow):
ATCAGGCAGAGGACGAGACAAAAGAGGGCGTTAAGAGACCCTCTTGGCCCAACCCTAAACACTCTAAGATCCTTTTTCAAACCCGCTCCCATTTCGAGTCAAGAGATAGATAAATAGACACATCCCATTGCACTGATCGGGGGCGTTCGTAGTGACTGAGGGGGTCGAAGACCAAGAAGTGAATTATTTATCAGCCAAGCATTCTTCTTACGGCTAGATCCAATCTCCTGGTCCCTGCGGAAAGGAAAAAGAATTTCACGTTCTTCCTTTCGGGAAGGGAGGATTAGGAAAATCCTATTGATTGCAGCTTTCTCCGGACCTCCGGGAAAAGCATGAAAAAAAAAGGCTCGAATGGTACGATCCCTCCGTCACCCCAGAATGAAAGGGGCGATCTCGTAGTTCTTGGTCTGTGAAGATACGTTGTTAGGTGCTCCATTTTATTTTCCCATTGAGGCCGAACCTAAACCTGTGCTCGAGAGATAGCTGTCCATACACTGATAAGGGATGTATGGATTATCGAGAAGAGAGGAGTCGTGGTGGTCCCCCCCGGACCGCCCAGATCCCAT



gi|164271906|gb|ES819257.1|ES819257 UFL_293_86 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
||||||||.|||||| .||
AAAGGATGGGGAGGGAGTGT

EST sequence (targeted fragment marked with yellow):
AGCATTTCTGTCTTGCCTGAGGAAGGAAACATGAATCCAAAATGCACACCACAGTTAACTTTTTTGAGCCTCTTAGAAGTTCCTTTTTTATCAAAAAACCAGATGTGCTTGGATGAGCAATTGAGTTGCCAGAACTGCATCGATTTGAAAGTGGATAGTGAAGATGCTTATTCATCGTGCATTCTGGATATAAACATTGAGAAAGAGACTCCCGACCTACTGAAATCTAATGATGAAACTGTTGGTAATTCAAAAAGTGAAGGCGTGGTTACACATTTGCAGAAGGTGTTACAGAGACAAGCAAGCTTAAACGTAGAGAAATCATCGAACGAGAGGGTTCATGATGCACCAAGCAACAGATGGAGAAGATACAAAAGAGCTGCATCATTTGATTCGAGGAAAATTGTCCTCCTTTTCTCAATCTTGTAAGCTCTTTTCTAGAAATCAAGCAGTTTATTTTTGAACTACAAATTTTCATAATTGATACTTCCATTTAGCAAAGACAAAAGATGAGTAATAATCTCGTGTGGACATATTTCAAATCTAATGTGAGGGAGGGGTAGGAAATATAGGGTTTATGGAATTTATTATGTTTAGAGAATGTGTTTAGGTTATAAGTTGTTTGTAAACTGAAACATTTGATTGTTTTGTTGGATTCAGTCAAGTGTGGGGAATTTGATCTTGATTTATCTCACGCTGAAAAGTTAACAAACCATTTGATGGGGTTCAATCATGGTGGAACACCTTTGTTTTCTTTTTTCCGCCTTTCAAAAAAGCTGGGGTGGGCTTGGGTGGTTTCTTTTTTTTTCTGAATTTCCATTGGGAAATCCAAATAAGAAAAATTCCACAAGGGGGCCACAGTTTCCCAAAATTGTTGGGAAAATTTTTAAGTTTTTACCCGGGTGGGTTTTAATTGAGAAACCCCAAAAAGGGGTCCTTCCAAAAAAGGGGAATTTTTCCCCCCAAATTTTGGATTCCCAAAAAAAAAAAAAAAA



gi|164313266|gb|ES848794.1|ES848794 UFL_668_93 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
|||||.||||||||| . ||
AAAGGGTGAGGAGGGGGAGG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGAGAAGCGGAGCATCCTATCTTGCAGTCAACAATTTTAATGGAATACATAAAAGGACGATCCTTGAAGACTCATATTGAGAAACTAGCTAAAGCTGGTGAGAAACATATCCCTGTGGATTTTGCCTTGTGTATTGCACGTGATGTTGCATCTGCATTGGCCGAGTTGCACTCAAAGCACATTATTCATCGTGATATAAAAAGTGAAAACATTCTGATCGATTTGGATGGAAAGAGAGTTGATGGGAGCCCTGTTGTGAAGCTCTGTGATTTTGATAGAGCAGTACCTCTTAGGTCTTCCCTGCATACATGCTGTATTGCTCATTTAGGGATACCTCCTCCAGATGTTTGTGTTGGAACACCTCGTTGGATGGCTCCTGAGGTTCTAGGCGCAATGCATAAGCGTAATCCTTATGGGCTTGTAAGTTTTTCTCTTGCCATTTTGGCATTGATTTTTGAATTGATGTTTCCTTGATTTGATGAAAATGATTTGAGTTGTATGAGCAGAGCAGATAGATTTGATGATAAATGCAAAGATGATTTACCTGGTAGATTGATGTTATGTTGCATAGAAAAAGGAGGGGGAGGAGTGGGAAAGTGGGTATAATGTTTAGAGGTAGCATTTAGGTATCAGCTGAAGTGATATGTTACTTGCTATATCTGCTTTGAGTTTTA



gi|164256207|gb|ES791627.1|ES791627 UFL_519_34 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
|||||.||.||.||||. ||
AAAGGGTGGGGGGGGTGGGG

EST sequence (targeted fragment marked with yellow):
AAGAATTCGACACGAGTAAACAGAGGCCACAGAAAAGGTCTCAGCTTGTAAGCAATTCAAATTCAAATTCTATGAAGTCAAACAGCTCCAAAAGTGTGGAAGAAAGAAAAGAGGAGTATAACCGAGCTCGAGCAAGAATATTTAACTCTAATAGTTCTAGCAGTGGTTCTGGTGGAAAACCACCAAGTGAACCAAGGTTGCAGGATGTTAACTACTATGGTTCCTCAGGGATGCCAAATATGGAAGAGAAATCTGTTTCAGTGGTTTCTGATGTAAATTCTGGTAGTGGTTTGATTGAATACTCTTCAAGTAGTAGTAGGTCAGCTAGAAGTAGGACAGAGAAGGAGCCAATTGGTAGGAGCAAACCACATAATAGGGTGGCCATCTTTCGGGATCGCGAGACTGACCGCAAGGACCCTGATTATGACAGGAACTATGATAGGTACATGCAAAGATTTGATCCTGGGTTTGGGTTCAATAGTGGTCCATACACAATGCAACCTATGTACACCCCTGCAATTAACTACAACACCGAATTTCCACAACTTGGATCCACTCATCGGCCTCAAATAGCTACTGAACACCAACCTCGGCCTCTCCCACAACATATACCTGGGCCCTGGGTCGCTCCACCAACCGCTACAGGAATCAGTTATGGTCATCCTGAAACAATGATGCCTCCTTTTAATCCAAATCATGTTGGAGCACGCTCCACATCTGCCATATATCTGCATTCTTCTCAGTATCCTCTTCAGCGTCCTGGAATGCCTTTTATCCACCCTCATGAGCATGTTCACCAGCCGTTTTCGCAGCCTCATCAACATCAGCCTGATGCTAGTTNTGGATTAGCCCGGCCCCAGTGAGGGGCTGGGGGCATGGCTGGCCCCTGCCAGTGAAACAATGATTTGAAATGGGATGGAGGAATGCAGTCTCGAGTTATGTAAACTGGGAGGAGTGCAGGCATAGAGGACCGGGGGTGAACTGGGACCATAATAATGGAAGGGTACTGGGGATCGATCCCCCTCCCCCGCAGGTCGGGTTTATGGGTGGAAGCTTCTTTAAATTTGGGTTAAGGGGTGGGGGGGGTGGGAAAAAGCCTCATTTGGGTTTGGGGGCTTAATTCCTTGGGCCGTTGGAGGGGGGGAGGGTGGAAAAAAAAAACGGGGGGGTTTAAAAAAGGGGGTAATCCCAGTCCCTTCCCAGGGGAAGGAAAAGCCTTTTTGTCGGAGAGGAGGGCCAAAAAGAGAAAAAAAGGTGGGGGGAAGAAAAATTTTGTGTTGGTTTTTGTTTGGGAGGAGAGCTCACAAAAAAAA



gi|164362159|gb|ES816494.1|ES816494 UFL_308_24 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
|||||||||||| ||| ||
TAAGGATGAGGAGTGTAGGG

EST sequence (targeted fragment marked with yellow):
ACCAATCCANTATAAAGAGTAAGACAATGATCGGTTTCCCTTTTGTACAGAAGGATACTAGCACCCTAACGAAGGAGTGGGTCTAGTTGCAATTGCAGNNCAAAACCGCAGCTGTAGCGAAAGAGTCCATAGGAGGTCGATGAGGCGGCTACCCAAGAGAGGAGAGTAAGGGTGTCGTANGAGGACCTGCGCCGAAAGAATAGAGATTGTGTGGGACAAGACATCGATGAGATAGATCAGGGAAGAGTACACCCTAAGCTCTAGTACGAGGANAGCTACCGGCAAGCGTGTCTCGACAAACAACTACGCTGATGAGACACACGCGAAGTATTTGCTAGTGAAGNATTGGGAGAACACGGTAGACGTATCGTTCTTACGAGAAGTGCCAACACCGTGAAGGTCGATATCAATGTACTCATTGTCATATCTCCTGAGCATATTACCGCGCAGGCGAACATCTTGGGATAGATGTAGATGTAGTAATCAGTGAGACAGAACTCAAGCTNTAGAAGTGTGTATTAGCCGATAGAATAAGGTATTAAGCGTATCTAAGATAACGACATGGTACTGACTAAGACTAGAGACGGGGGATGTGAGGAGTAGGAATGCTGAGGACGCACGGAATACGACNTGAATGCGACGACAATAGAGTTACTGCTCTACTAGGACANTGAATGGTGTATATGAGTGATAATCAAGATAGCACAGTTATAATATGGCGCTGGACGACTGATAANCAGGTCGAACGACGACAACACGAATGAGCACAGCAGNCGACAGCACATGNCATGCCGTTGACGGCGCGCGACATGGACGACAGATGCCATGTCNGTCTACATACTGCGAGACCTCACCTGCATCTGATCGACACGCCTCGCTATTAGTCNGACTGCTAGCATTGAGTGTTGTGAGTGTGTGCGCGGTTGAGTGCGGTCATGTAGGCTGGTCCATGGGGCTGTGAGTGATAGTGAGCTGGAGTTGTGTTTAGTCTGCTTNTATGAAANAATACTGAAGACGAGGTGAAACTAAATTGCACACGTGATGTGAATGTGGTGGAATGAGATCTGCTGATGTACGTTGCTAGACTGAATGCACAANTGAGTATGCTCNGTATAGCACATATAGTCGTGTATGAACAGTGTAGAGAGCTCACATGTGCAAGTACCGAATGGACGGTAATATCGACTNCNGNCGCATCGTCTCGTGGTACGTGCAANAGCGCTCTGGCCATCAACACTAGTATAGCTATGCGGATGTGCTTGTACACGTGAGGATTGAGTTNAGCTGGATGATGGAGATGCGAC



gi|164253961|gb|ES847196.1|ES847196 UFL_141_51 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
.||||.||.|||||| | ||
GAAGGGTGGGGAGGGAAGGG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGAAAAGCATAGAGGAAAAACCATCCTCATGAATTTGTTGCGAAACCTGAGTCATTATTCCTGGTAAGTTAAATTTTCTATTTAGTTCCTATAATTTTTTTTCCATTATTGGTTCAATAAATCGGGCGGGTTTGTCTATTATTTTCACTTCTTGGCAATTGGACACTGTGTTGTGGGGGGGGATTTATAATTTTGTTTTAGATTTTTTCATTTTGGTTAAATTAAGCAGTCATTTTGAGATAATATTAGAGATGGAGCTGAATTGATCTAATTGAAACCTAATCTTATGCGATTTAAGCTGGTAGAACATAAACTGCAAAGATATTGATGGTTCTAGAGAATGGTAGTAATGGGTTAAGTTGGGAAGGGAGGGGTGGGAAGGGGAGAGGGAGAAAAAAGGAGGTTCTGTGTGGGGGGGGGGGGGGGGGGGGGGAAAGGGGCCGGGGAGGGGAGGGGTCTGGGGGGGGGGGGAGGGAGAGAGATAAATGGAGTACAAGGGAGGAAGAGGGGAGGAAGGGGAGAGAAGGAGATGAGGGAGGCGAGCGAGGGGGGAGGGGAGGAGAGAGGGGGGGGGGACAGGGGACGAGGAAGGGGGG



gi|164247558|gb|ES845665.1|ES845665 UFL_125_06 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
|.||||||.|||||| . ||
AGAGGATGGGGAGGGGGGGG

EST sequence (targeted fragment marked with yellow):
GGGGGGGGGGGGGGGGGGGAGATAAACAAAAAAATTTGGGGGGGGGGAGGGGTAGGAGAATTTCTTCCTTTTCTTTCTCCTTAAATATTTCCCCGTTTTTTCGCTTCGAAAATTTAGAGGGGGTCGGCTTTTTGCGCGGCGGAGGGAGGTCGGGCGTCCATCTACCCCCTCCCCCTTCCCTTTTTCGCTTAGAAGGCTTTTTTTTTAAAAAAGGGGGAATACTTTGTTTGCCGAGAAAAAAAAAAAATTTGGCTCCGCGGGGCACGTCTTCGTGGGGGGGGGGGTGGAGGGGGGGGAAAGAACTAAATACCCCCCCATCTCTTTTCTCTTAATTACCGGGGAGCAGGGGAACCGTCCGCCTTTTTTTATTTCCCTACAGAGTGGCGGTGGGGTTTTGTTTAATTTGATGAGAGGGAATCTTCTATGGCTGCCGTCGCGCTTTTTTTAAAACAAAATATTTCTAATTTTGTAGGCGCGGCGTTGTGTCGTGTCGGACCCGCGGGGAGCCCACCAGGCTGCCCCGCTCTACGTTCCGTCTCGAGATTGCGCCGCAACACTTTTTCCCCTCCCTTTTGAGTGCGGGGGGGGGGGGG



gi|164274659|gb|ES792519.1|ES792519 UFL_509_69 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
|||||.||.|||||| . ||
AAAGGGTGGGGAGGGGGGGG

EST sequence (targeted fragment marked with yellow):
GTGGGTCCAAGAATTCGGCGCGAGGACAGTGCGGGAAAAAGAATCATCAAACATGGGGACCAAGCAACTGGTTTCTCTTGGTCGGCGGGCCCGGAAGGCATCATATTCTTTCACCGGCGGTAGATCATCTTCTTCGGGCGGCTCTCCGGTCGGCGGCGGCGAATCTAAAGAAATCTCCCCTCCTCCACCAACCGGCATGGTCTACGATCGATTAGCCCTCGCCGGTAAATCAAAGCTCCAAAAGCTCGAAAACCCAGATCCTCGTTTCCTCAAATACGGGTCCCCTCACCCAACCGGAACATCCCACACCCACATCTTATCTTCCCCCGAAACCAAAATCACAACTTTGGCCAATGGGCTTCGGGGGGGAACCGAATCTACCCTGGCTTCCCACACAGCCACGGGTGGGGGCTGGAGGGGTGGAGGATCGAGATTTGAGACCGAGGAGACGAATGGGACAGCGCATTTCTTGGAACATATGATATTTAAAGGGACAGAGAAGAGGGCTGGGAGGGAACTGGAGGAAGAGATTGAGAATATGGGAGGGCATTTGAATGGTTATACTTCTAGGGAACAGACGACTTATTACGCTAAAGTTATGGACAAAGATGTCTTTAAAGCGGTGGATATATTGGGCGATATTTTGCAGAATTCGAAGTTTGAGGAACACAGAATTAGTAGGGAAAGGGATGGGATTCTAAGGGAAATGGAAGAGGGTGAGGGTCAAACGGAGGAGGGTATTTTTGACCATTTGCATTCAACTGCTTTCCAGTACACTCCTCTTGGGAGAACTATTCTCGGACCTGCTGATAATATTAGGACGATCACCAAAGGAGCATTTGGAAAGCTATATTCAGACACACTATACTGGGTCCTAGAATGGGGCATTGGGTGGAATCGGGGGGGTGGTAAGGATGAGGGAAATTGGTGGACCAAGTGGAAGAAGTTGGGTTACCAAGGTTATTCGGCCTGGATCAAACCCCGGGGGTCTCAGTTAAGTAATGAAACAAAACCAGCGAACTTTTTACGGGGTTTCGGGAGGGTTAAAAGGGGACAAAGGGAGGGGTGGTCTCCTCTGGGGGGGAAATTTTGGGGGGTTGGGTTTTTGGGGGGGGAGGTTTCCCTGGGGAGAAAGAATCCAAAAATTTCCCATTTGGGCGCCTCCAGGGGGGGTTAATGGCAGGGGGGAAAGTGGGTGGGGGGGGTTTCGCGGGGGGGAGGAAAAAGAATAGGGGTGGGGGGGGAGGGGTGGGAAAAACAACACAGGGGGGGGGTCCTCTGGGAGAGCGGTGGCGGAACAAAAAGAAGGAGCCGGGG



gi|164295319|gb|ES847445.1|ES847445 UFL_144_27 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
..|||.|||||.||||. ||
GGAGGGTGAGGGGGGTGGGG

EST sequence (targeted fragment marked with yellow):
TTCGGCACGAGGTCTCGAGTTTTTCCTTTTTTTTTTTTTTTTTTTGATTTAAGCTTTGTAAATTGATCTAAAAAAAAATTGGTCTAAACAAGAAAGAACTCAAACCTGAAAACATTATAATCTAAAACTGACTCGGACTTTTCTCAAAACGGGATATGTCTATATTTGAGTGACAAACGAGGTGATAGAGTGAAGAATCTTGGATCATTCCCAGAATTTAATTTTTCTGTTTCTTCTTAGCCTGGTTCTTCTCCAATTTTCTTTTTGGTTCGGATTTTGGAAAAAACTCCCTCCATTCATCTGTTAGAACAAAAACGGGCTCATCTTCCTCATCATCCTCTTCTTCTACCTGTTGTAGTTGTTCATACTCTTGGTTTTGGAACGCCGGATTGGCAGAATGGTGGGTTTCGTTTGGGGGGGGGTGGGGAAACAAAAGGACCTAAAGTAGGGATTACGTGAGAATGGTGAGTAATGAGGTGGTGATGGTGGGTGTAGAGATGGTTAGTGAGAAGAGAGGGGGTGAGGTGGGGAGGGTGGAGGTGGGGGGGATGGGTGGGGGGGGGGAGTTAGTGAGAGTGGGAGGTGAAGGAAGTGTGAGTGGGGGTATGTGTGGGGAGGGGAGATGGGGGGGAGAGTTAGGGGGAGGAGTAGGGAGGGTAGAGGGGGTGAGGAATAGGGAAGATGGGATGGGAGGGGGGGGGGGGGAGTGGATGGGTGTGTGGGTAAGCGTTGTTATAATGGGGGGTAGGTTTGGGATGGTGGAGGTGTGGTGTGAAGAGGGTGGTGGAGGTGGGAGTGGGATAGGATGGTGACGTGGTGGAGTGTTGTGGGGGTGGGGGGAGTGGGAGGGGGGAGGTGATGGGAGGTGGGAGGTGTGGGTGGTGGG



gi|164240684|gb|ES801345.1|ES801345 UFL_565_47 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
|||||| ||||.||||| |
AAAGGACGAGGGGGGTAAAG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGCTTTTGGGCTTTGACAATTACATCCCGCCTTACTCAACCGCAAGCGGTCGACAAATACTGGGAGGAGTTAACTATGCATCCGCGGCTGCCGGAATCAGAGAAGAGACCGGACAGCAACTGGGAGCTCGGATCAGTTTCAGTGGCCAAGTTAGAAATTACCAACGAACAATTTCACAAGTGGTGAACCTGCTTGGGGATGAAACTTCGGCAGCAAATTATTTAAGCAAATGCATTTACTCGATCGGACTCGGCAGCAACGATTACCTTAACAACTATTTCATGCCCCTTTATTACTCCACCAGCAGGCAGTATACCCCCGAGCAATTTGCTGATGTTCTTATTCAACAATACACTGAGCAGCTTCAGGCTTTGTATAACTATGGGGCAAGGAAGTTTGCGTTGATTGGGGTGGGTCAGATCGGTTGCAGTCCCAATGAATTAGCTCAATACAGTGGAGATGGTAAAACATGTGTGGAGAGAATCAATGCTGCAAACCGGATTTTCAATGACAAGCTTAAAGGGCTCGTTGATCAATTCAACAACGCCAATTCCGATGCCAAATTCATCTACATCAATGCTTATGGAATTTTCCAAGACATAACAAGCAACCCCGCCACATACGGTTTTAAGGTAACAAATGCAGGGTGTTGTGGAGTGGGGAGGAACAATGGACAAATTACCTGCTTGCCTGCCCAAACTCCATGCCCAAATAGGAAAGAGTACTTGTTTTGGGATGCTTTTCATCCCACTGAAGCTGCAAATGTGATCATCGGGAGGAGATCTTACAGTGCTCAGTCTTCAGCAGATGCTTACCCGATCGATATCCGCCGTCTTGCGCAGCTCTGAAGACGGGGGGAAGATAGGCTTTTGAAAAGAGGAACCATTAAGTTTTTTTTATTAATAGATTCATTCCCATGAATTATAATACTAAGTTTGGGGTGGGTTCTAAAATTTTGGTTACACAATCATTTGTAAGAAGGGGGGTCGTTTGGTGGTTATTTCAAGTGGAAAAATTAAATGGGCTCGGTGGTTGTTGGGATTTAAAAAAAAAATTTGGGTTGGGATTCATCCCTTTTGGTAAGGGTTAATGGGTTGGCGGATTTTTGAAATGGGGGGAGCAGGAAAAAGGGAAATCAATTAGGGATTCTAATGGGGGGAAAAAAAAAAAAAATGGAGGGGTCTTAAAAGGAAAAAAATAAATTTTTATTGTGGAAAATTTTGGAAAAAGGGGGGGGGAGAAAAAAAAAAAGGGGGGGGGGGTTTTTTTTTGGGTAGATTGGGGGGGG



gi|164348678|gb|ES847820.1|ES847820 UFL_148_31 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
||.|||||.||.||| | ||
AAGGGATGGGGGGGGGAGGG

EST sequence (targeted fragment marked with yellow):
GGCACGAGTGAGCATCGGAGGGAGTTTCTTCTTCAGTTAGAGGAATACACCAAGCTCTGGATGCCGAGAGAAGCCGATATGAAGCCAGGCTCATGGAAGAACACGAGGCGGCCATTATTCAACTTCTTAAAGGGCCTGTTTGTCAGAGCAAACCCGGTACCTAGTTTCTACTATGAAGGACCTCCGCCGTAGGTTGAACTGAATAAGCTGCCATTGACTCGGCCGAAGTCACCAAATCTTACCCGGAGAAAGAGTTGTACTGACGTAGTCCACTCAACCGAGGATGAAAAGGCAAAAAGTTGCTGCCGGGCTCACCGCCACAGCTTTGGTAACCTTAGGGAACGGTCCACTACTGTAAACAAGGAAAAGATCGAGTGTCAGGTGAGTGCCGAAAGAGGGGTTGAGTAGGGGGGTGGGGGGGGGGGGGCGACCCCCTGGGGGATAGGGGGGGGGGGGGGGAGCCGAGGGACCGAGGGAGGCGGGGGGATTGTGGGGGGGCGGTCGGGGGAGGGGCAGAGGCGGAGGGGGGGGGGGGGGAGGGAAGGGGGGGGGGGGGGTGGTTGGGGGGGGGGTGTGTGTGTGGATATGGGGGAGGGGGGGGGGGGGGCGGGGGAGGAGGGGTTGGGTAGGGGGGGGTGTTCGGGGGGGAGAGGGGGAGGGGCAGAGGAGGGGAGGGGGGGGGTAGGGAAAGGGGGGAGGGAGAGAGGTTGGGAAGGGGGGGGGGAGAGTTGCAGGGGAAGGGAGGATGGAGTGGAGGGGGGGCGGGGTGGCGGGGAGGTGGGGGTGGAAGGGACAGGGTGATGGGAGGGGGGCGGGGGGGTGCAGAGGAGAGAGGGGAGAAGGGCGGGGGGAGGATGGGGAAGGGTGGGGGGGTTAGAGGGCGGGGCGGGGTGGAGGTGGGGCGAGGGGGAGGGGGGAAGGCGAGGGCGGCGGGTGTGGTGTGGTGGGGGTGGGGGGGGGGGAGGGGGGAATTTGGGGGTGGGTCGGGAGCGAGGGGGGGTATAAAGAGAAGAGGGAGAAGGGGGG



gi|164289739|gb|ES798802.1|ES798802 UFL_540_70 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTCCTACTCCTCCCATACC
|||||.||.|| ||||. ||
AAAGGGTGGGGTGGGTGAGG

EST sequence (targeted fragment marked with yellow):
GGTGAAAAAGCAGCTCACTTTCTCCTTCATCAAACCCCAAAAACCTAGCTTTGCCTCCTTTATAATTTCTTGGATTTTGGTGAACTTTACGAATCCAAGATCAGAGTATAAAGGATTCGAGTTTTAACCCAGAATTAAGTACTTCTGTTCTTTTTGATCTTTGGGTTGAAATTGTCTACACAAAGAGGGTGATTTAGAAATGGATGCTGATCCATGGACTCTTTGTCTTTCTTCAACTGCTAGGAGATATCAATCAGCTCTTCAGTCACGATCTGATATGTTTATGGGGTTTGAAGAAATGGATGGAGAAGACGATATAAGAGAGGAGTTTCCATGCCCTTTTTGTTCAGAGTATTTCGATATCGTGGGCTTGTGCTGTCACATTGATGATGAACATCCTGTGGAGGCTAACAATGGGGTATGTCCTGTCTGCGCAATGAGGGTGGGAGTAGATATGGTTGCGCATATAACGCGACAACATGGACATATATTCAAGCGTAAGCGGAGATCACGTAGAAGTGGATCTCATTCAACGCTTTCTCTTCTGAGGAAAGAGCTGCGAGACGGAAACCTGCAGTCCCTCTTCGGGGGTTCTTCTTGTATAGCGCCCTCATCGAACCTCTGCACCTGATCCGTTGCTGTCTTCGTTTATTTTGCCTATCGTTGATGATTCTGGTAGGGTGCAGCCTCAGTTATCTAGCGAAACCAACACAGCTACGAAAAGGTCAGATGGGAATAAGGCCGAGAGAAATGTGGAGTCATCTCCTCTTTCAAGTGAAGGGAGAGGGAAGAGAGAGGGAAAAAAGAAGGGGAATTTGGTGTAAGGGGCTGCTGGTATTCCACCATTTCCTTGAGTGATGGTTGTTAGGGAGAAACGTTTAGAGGAGTGGGTGGGGTGGGAAACGGCGGGGGGGGGTCTAAGGGGTGGCTCAAGGCGCCAATGGCAGGGGGGTCTCCCCCCAGACCGAGTGGGGGTGGGCGGGCGCGGGGTTGCGGGGGGACGGCGTTTGGGACGAGGTGAAGACGAGAGGGGGGTAGGGAGGG