| mature miRNA: TTTCCTGGAAACCAAGCCAAATTTT species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73894236|gb|DT496974.1|DT496974 WS01125.BR_B18 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01125_B18 5', mRNA sequence TTTCCTGGAAACCAAGCCAAATTTT EST sequence (targeted fragment marked with yellow): GGACAACAGCCGCTCTGCTGAAACCCAAAAACCCCTGAGCAGCTTTACAAACAGGGATTCAAGATGGCAATGGCATGGAGGCAGATAATCACAAACACAAAAAGGGCAGTTTCAATCCCAACACAACAAGCAATTTCTACACCTGGGTTCTCTAGATTCTTCTCCAAATCGTCCTCTCGTTACATCGTGAAAGTTGGAATTCCAGAGTTTCTAAATGGAATAGGGAAAGGAGTTGAAGCCCATGTGGCCAAGCTTGAATCTGAAATTGGTGACTTTCACAAACTTCTTGTTACTCGGACTTTAAAGCTCAAGAAACTAGGCATTCCTTGTCAACAGAGGAAGCTGATATTGAAATATGCTCACAAGTATAGGTTGGGGCTGTGGAGGCCTAGAGCTGAACCTGTGAAAGCCAAATAAATCTCGGAATCATCTGTCATTTGGAGGATTACAAGGTGTTTGTCGTTAACATTCTTGCATGCAATTACGGTTGCAAAGAGTTTAGGTTTCATGAAGGCCATGTTTGTTTCCCGGAATTCACTTTTCGGGAAACCACTTTCCAAACTTTCCTGTGTTTATTTGCTATTAGGAAAGTTGGTCAACGGAAAACACTTTCCAGTCAACGGAAACACTTTTCGAATTTGGTTTGGTTTTCAGGAAAGTGTTTTTCCTTTTGGCTGTGTTTGTTTTCCGGAAAGTGATTTCCGGGAAACCACTTTCCAAACTTTCCTGTGTTTGTTTGCCATTAGAAAAGTTGGTCAACGGAAAACACTTTCCAGTCAAAGGAAAATTTGGCTTGGTTTTCAGGAAAGTGTTTTCCTGAAAAATTTGGGCAGAAAACACTTTCCAGAAGTTGTGAAAAATTTAGAAATGTCATTATTTGCTGATTATATCAAATTTGATCCCCAAAAAAAAAAAAAAAA | |||||||||
gi|73894236|gb|DT496974.1|DT496974 WS01125.BR_B18 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01125_B18 5', mRNA sequence TTTCCTGGAAACCAAGCCAAATTTT EST sequence (targeted fragment marked with yellow): GGACAACAGCCGCTCTGCTGAAACCCAAAAACCCCTGAGCAGCTTTACAAACAGGGATTCAAGATGGCAATGGCATGGAGGCAGATAATCACAAACACAAAAAGGGCAGTTTCAATCCCAACACAACAAGCAATTTCTACACCTGGGTTCTCTAGATTCTTCTCCAAATCGTCCTCTCGTTACATCGTGAAAGTTGGAATTCCAGAGTTTCTAAATGGAATAGGGAAAGGAGTTGAAGCCCATGTGGCCAAGCTTGAATCTGAAATTGGTGACTTTCACAAACTTCTTGTTACTCGGACTTTAAAGCTCAAGAAACTAGGCATTCCTTGTCAACAGAGGAAGCTGATATTGAAATATGCTCACAAGTATAGGTTGGGGCTGTGGAGGCCTAGAGCTGAACCTGTGAAAGCCAAATAAATCTCGGAATCATCTGTCATTTGGAGGATTACAAGGTGTTTGTCGTTAACATTCTTGCATGCAATTACGGTTGCAAAGAGTTTAGGTTTCATGAAGGCCATGTTTGTTTCCCGGAATTCACTTTTCGGGAAACCACTTTCCAAACTTTCCTGTGTTTATTTGCTATTAGGAAAGTTGGTCAACGGAAAACACTTTCCAGTCAACGGAAACACTTTTCGAATTTGGTTTGGTTTTCAGGAAAGTGTTTTTCCTTTTGGCTGTGTTTGTTTTCCGGAAAGTGATTTCCGGGAAACCACTTTCCAAACTTTCCTGTGTTTGTTTGCCATTAGAAAAGTTGGTCAACGGAAAACACTTTCCAGTCAAAGGAAAATTTGGCTTGGTTTTCAGGAAAGTGTTTTCCTGAAAAATTTGGGCAGAAAACACTTTCCAGAAGTTGTGAAAAATTTAGAAATGTCATTATTTGCTGATTATATCAAATTTGATCCCCAAAAAAAAAAAAAAAA | |||||||||