| mature miRNA: TTTCGACAAGTAATTCCGACCGGA species: Brachypodium distachyon database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|270397802|gb|GT779177.1|GT779177 CCXF13655.g1 CCXF Brachypodium distachyon abiotic + biotic stress pool Brachypodium distachy TTTCGACAAGTAATTCCGACCGGA EST sequence (targeted fragment marked with yellow): GAACTACCTGTTGACAAGCTCATGCTGAACCTACTTAGTGATCACTCTAGGTGGATTGCAGGTTATCACGAACATGAAGCTCTTCTGCAAGAAAATGAAGATGAAAGGCTTACTAAGGAAGAACAAGATATGGCCTGGTCAAGTTTCAAAAAAGCGCAGCAGTTGGAAGCCGTGCCAAGGAGAAGTCATGATCCTGAGAGAAAGCCAAATGTGATCGCTCTTCCAACACAGACCAGCCTTGTGCCCCCCAAAGTTACTTCAAGAAGTCGGCAGCCACAGCAACCAAAGACTAACTCGAACCAGAAGAAATGCACCAATCTAACCCACTTGCTGACTCTAAGAAGTCACGGCACCAAAGCGGGATGCACGACAAGCTGTACGGAATGTGGCCAAGACATTAGCTGGGAAACCCTAAACAGAGATGGTGGTAGGTTAAGGTGATGCTCTACTTGGCTTTGTCCATGTAAAATTTCAGTGACGCATTTTCTGTTTATTTTGTTTAATGTACTCCCTCCGGCCGGAATTACTTGTCGAAATATTACATGTATCTAGACGCTTTTACACATAGATACATCCGTATTTGAGAAAATTTGAGACC | |||||||||
gi|270469342|gb|GT851922.1|GT851922 CCYP8714.b1 CCYP Brachypodium distachyon leaf + leaf drought Brachypodium distachyon cDNA cl TTTCGACAAGTAATTCCGACCGGA EST sequence (targeted fragment marked with yellow): CTTCAGTAATTTATGCACCTGATAATTGCACCTAAGCAACTCATGCCAGTGGAAATGAGCATGCTAGTTGTTACCGGTATTTGCTCCGTTGATGTTCTTTTCTTTTGTGTGTGAATACCTTGATGTTGTTTTAATGCCAGACGGAAGCTTTGGTGAAGAAAAGCACCATGCAACATCGCGAATGCCTGCTTTGGCGTCAGACTATTTAGCACCATACTCACAGCTGGAACTGAACCAACCAATTGTGCGAACTTTTCCCCTTTGTGGACTATTCTTTTCTGTTGATATTTGTAATATTTGTGCACTTATATGGCAATTCTTTTATCTCAAGTTCATATTTGCATTGTTCAGGCTTCTGCCACATATCCGTACCCTGATGCTTACTATACAGGCATGGTTGGTCCCTATGGAGCTCAAGCCGTGGTACATTTTTATACCAATTTAAACATCATAAATCATCTCCGCTCTTGTATGCGATCCCTTCATGGTATTGGTGTAAATTATGTTATTATGCACTAGACCTATATGAGGACAATATCAAATATGGCATGTTAATCATATATAAATGTAAAAGATATAAAGAAGTAGAGAGTGGAAATGATCTTACTCCCTCCGGCCGGAATTACTTGTCGAAATATTACATGTGTCTAGACGCTTTTTAAACATA | |||||||||