| mature miRNA: TTTGGATTGAAGGGAGCTCCT species: Cynodon dactylon database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|209856554|gb|ES304097.1|ES304097 -47-J02 Bermudagrass Normalized cDNA Library Cynodon dactylon cDNA 5', mRNA sequence TTTGGATTGAAGGGAGCTCCT EST sequence (targeted fragment marked with yellow): GCCGGGGGCCAGAAATTAAAGTTGTGCACCGTATCTCGTGAGATGGGTTTAGCTTCTGTAGGACTGAATTCAAGAGGTCAGGCTGCTTCGGAGTGCTTACTCCGAAGTGGTGCCTAGATCGCGCTTTACGAGTCGGCTTCATGAGGCATGCCACACACTTTACCAGGAGGCTTCGTGCTTGTGGGCGCTCGGCGGAGAACCCGTGAGTGTCATAGCTGCCTCCTCGAGTTATTGCGTGTGGTTCGCGTCTTGGGAGTTATTTGGTGGCGGACGGCGGTGCCGGTGGTTGGTGCTTGTGCGCTGCATCCGGGCTACCGCAGTCCATAGTGCTGCCATAGCTTCCACAAGACACCCTCCACTTCGACCGTGATTGTGGTGCGGAGGGGGTCTGGTTCTGTTCCCTGTGTCGGGCGGAGGTTGTTCCGCTTGCGACATAGGTTTATGTTTCGGTTCATTGTAATTTTTTGCCTATGAGCTCTCTTCGATCCAGCGATGTTTGTTGAATAAAAATGACTGTGATTGCTGGGTCGCCTCTCATAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGT | |||||||||
gi|209850496|gb|ES295626.1|ES295626 _12Z_C02 Bermudagrass Normalized cDNA Library Cynodon dactylon cDNA 5', mRNA sequence TTTGGATTGAAGGGAGCTCCT EST sequence (targeted fragment marked with yellow): GCTCTATGTCTTCTCACAAATCCATAGCACGAGGCGTTATTAGCGATTAGTCTTTTATGTTTAACGAATTGATGTAGTGATAAGGGAGGTGAAGATAGAAGAAGATGAATGGACAGTTATTCTGGGTGTTCGAGCAGGAAAAAAAGAGAAGGATGATGAATCGAAGAGCTCCCTTCGATCCAATCCAGGAGGGGGAGTGGTCGGATGCAGCTGCCGGTTCATGGATACCTATCTGGTGCAGAAATGTTCCATGTTCACCTGCACTTGCATGGGTGTGCATGACCCGGGAGATGAACCCACCAGCATCTTCCCCTCGTGTTTGGATTGAAGGGAGCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGTTTGCACTTTCACATTCCATGAAGCATATATATGCTTTTGTTTGCCGATGAGACTTCTCGCTCATTGTTGTCGTTTCCTTTGCAGATTCATGCATGTATTCAATGAAGCAATGACGGATTGATAGCTGATCCGGCAACGTTGTCAGGCACTGATTAAGGAACGATACGAACCTTTGAAGTATGGAGGATGGCATGTAAATTTTACAGTGTTTCACCATTCTTTCTGTCTCTTGTTTTTCCCTGCCCCGTGATAAATCCTGCATCAGTTGTCACTTTAAACAATCCATGTTTATGAGACACTATTTCCTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGT | |||||||||
gi|209847064|gb|ES292512.1|ES292512 _03X_C06 Bermudagrass Normalized cDNA Library Cynodon dactylon cDNA 5', mRNA sequence TTTGGATTGAAGGGAGCTCCT EST sequence (targeted fragment marked with yellow): AGCTTGCACTGTTTGGCTCATTTTGCCAACTGACTTCATGTAGCAGAGTACCCATTTTGCCAAATGACAGATAGGCACTCGCCTGCCATGAATGATCAATACTTCATTCAGGCGTTGGCACCAGTGCCGTGGTCGCGTCCTGTTGATGATTATCTGCAAGAGGCGCCCTTGTCGATGAATCATGTTTGTCCCATTACTATCTTAGAGACAAGCATCTTGCAAGGTAGTGGTGGTGTTTGCCCTGCTACTTCCGCGACTCTGGTTCAGCTGTTTCGCCCCTAGCGATAGTGATGATGAATTCGGGGTGATGTAAAATGAAATATAGGGTCGTTTTTAATTTTTCCAGTTTTTGAGCTTCCTTCAATCTAAATCTATTGTACTCGCCACCGGTGCGTGTTTTTATGGAGTGATTATGTTCGAAATAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAATTTTTTTTAAAAAAAAAAAAGATAAAAAAAAAAAAAATAAAAAAAA | |||||||||