miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TTTGGATTGAAGGGAGCTCT
species: Citrus sinensis
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|188429604|gb|EY671459.1|EY671459 CS00-C1-102-081-D09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2)

TTTGGATTGAAGGGAGCTCT
|||.||.|||||..|.|| |
AAATCTGACTTCTTTTGACA

EST sequence (targeted fragment marked with yellow):
CCCACGCGTCCGCCCACGCGTCCGTGTTTTCATCCGAGTGTCACTTTGTGCAGTGTATTGAAATGTTTGGCAGAGGTGGCCCTGCTCCTGGTGTGGGAGTTGGCTGGGGTGCTCCTGGTGGTGGTTTTTGGTCCAGAGCTGTTTTATTGGCACAAACAGATGCACGGTTGCTCATCGACTTGCTTGAAATTATTCAAATGATGCCTGTCTCTGAGTTATCTACAAACGATGAGATGAATTTTGCTTCACATATTGTTGATTCTGCCTTTGGAATATGTTTATCTGCTGGGCCAAGGGATAAAGTTATTGTAGAGAAGGCATTTGATATTTTGGTTCAAGTTCCTGTTTTGAAGTCTCTTGCTCTGTTTATGCACAGTTTTCTTCAGTCTAAAGAGAGAATGAAATTATTTGGGTGGGAACTTAAAGAAGAGGATTACCTGCACTTCAGCAACATATTGGCTTCTCACTTCAAAAGTAGATGGTTGGACATTAAGAAAAAATCTAAAGCAATTGATGACAATAGTAGCCGTGGCAATAAGAAAGGAAGTACTTCTCTGGATACCATACCTGAAGAGTTGGACTCATCAAATATTAGAGGCCAAGATCATTGCTGCAGTTCGTTGACAGTGGAGTGGGCTCGCCAGAGACTGCCTCTTCCCATGCATTGGTTTCTCAGTCCAATTGCAACCATCTCTGATGGCTACCATGGTTGTCTTNCAAAAATTCCCAAGATGATGGTTCTGGACCCCAATATGCTCGAGGTTGCAAAAGCTGGACTTTTCTTTCTTTCTCGGAATGGAAGCTATGGCCTCATTTCCTATCCTCCAAAGTCCCCCTCCCCTGTTCCAAATGGTACCATTATTTTTGGAAAATTGCATTTCTTTTTATTGTTTTCCCTTCTTTGCTTGGAATGGGGGGGGGCTTTGAAAAAAG



gi|188324037|gb|EY682547.1|EY682547 CS00-C1-650-034-A06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRN

TTTGGATTGAAGGGAGCTCT
|||||||.||||.| |||.
TAACCTAATTTCCTTGGAGG

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGTGATGAGTTAAGCCCGACTTGTGTATCTTCACTACTGGGCATCCAGATCGAGGGAGTGGCTGCAGGACTATGGCACACCATTTGCATTTCCAGCGATGGTGACGTGTATGCTTTTGGTGGGAATCAATTTGGGCAATTGGGAACTGGTGGTGATCAAGCAGAGACTCTCCCCAGGCTGTTGGATGCTCCAAGTTTGGAAAATGTACATTCAAAAAGTGTCTCTTGCGGGGCGCGTCACACTGCTGTAATTGCAGATGATGGAAAAGTGTTCTGCTGGGGATGGAACAAGTATGGCCAGCTTGGCTTGGGTGATGTCATTGATCGCAACATTCCATCTCAAGTTACTATCGAGGGTTGTGTACCTAGGAACGTGGCATGTGGCTGGTGGCATACCCTACTTCTTGCTGTGCCCCCTACTTGAGCATCTACCTATTTTAAGGCGTTGGCAACAGTTTTGTTAGATTAGCAGTCTGATTGATTGGTATATTGGTCGTTTGCATATATTTGATACAGTAGCTTGTACATGTATTCATGTGTGCTTCCTCTTCATTTATTCATGGTGAGGGCTCGCCGTGATTAGGTATATTGAAAATATGAATAATACTAATATGCACAAACATGATTTTGTCCATTGTGTATATTTCGATGTTAGTCACCTTGAACCATCCAATGTAATCATTTGCCAGGAGAAGTCACGCCGGTTGTATTGGAGGTTCCTTTAATCCAATCCGGTTCCCTCGGTATTTCTTGGTAAAAAAAAAAAAAAAGGGCCGGCCCCCTCAAAGGGATCCAACTTTACCTACCCCGTGGCATGCAAAGTCTTATCCTCTTTT



gi|188358609|gb|EY741314.1|EY741314 CS00-C3-705-083-C09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cD

TTTGGATTGAAGGGAGCTCT
| |||||||||.|.|.| ||
ATACCTAACTTTCTTTGTGA

EST sequence (targeted fragment marked with yellow):
CACGCGTCCGCGGACGCGTGGGGTCCACTTCTTAAGATTCGAACCAAAATGAACAAGCCCGAGTTGAGTTGAACAGATAAGACTTGAAAGGAAAAATGGTGATAAGTGTCAGAGAAATTCATCCTCTTGGCCTCTCTGCTTCAATCCTTCTACTTCCAGGATAAAGACATCTCCCAGACTCAGAAACTCAATATGCCGAGCCAGTTTTTCTGTTCAAAGACAACCCACCAACGCCATCTCTACCAGCACCTCCAAATTTAGCAGTTGTGAGGGTTCAGTTTTTGATCCCTTGGGTATCAATCCAGATGTATGTTCTCATTTAAATAGCACTTGGGAAAGTTTTCTAAGCTTGTTATCACCAACATTTGAGAGCACATCTGGAACCAAAAGGGAAAAATCTTCTTCAGCTCGAGGAGTGGCAGCTGCAATGGAGGACAGTTCAATTGATTTTGGGGACTTCTTTAAAGGCCCATTACCCGGAAAATTTCTCAAGCTGTTGGGGTACTTGGCCCTATCACGACTTGGAATATATATACCTCTCGGTGGGGTTAATCGAGAAGCTTTTGTAGGAAATTTGGATCAGAACAGTTTATTGAGCACGTTGGATTCATTTTCTGGAGGAGGCATTGGTAGACTTGGAATATGCTCTCTTGGTATTGTTCCCTTTATNAATGCACAGATCGTGTTTCAACTTCTTGCCCAAATTATCCCAAGTTGCAGGATCTTCANAAAAGAGAAGGTGAAGCGGGAAGAAAGAAAGTGTTCAGTACACCCGATATGCTTGGGTTGGTTTGCAATATACAGGGGAGTGTTTCTTTCAATCCATATAGAGAATAACAGTTGTGTACATGAAGGTTGATTTGTGCAAGCTCCTTTCA



gi|188353776|gb|EY751020.1|EY751020 CS00-C5-003-102-G10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA se

TTTGGATTGAAGGGAGCTCT
||||||||.||...|| ||.
AAACCTAATTTTTTTCAAGG

EST sequence (targeted fragment marked with yellow):
TTGTTGAGACTTGTCCTTGATACCAATTTTCGGTTGTTTGTTATAACGTACTGTTGACGCTTATTTTTTGTCACTTTTTTTGTGTGCATATTTTTGTCAACGTTATTTTACTGCAGCTACTTGGAGAGGAAGCACAAGCATTGGAGTGGAGATCACAGTGTGGTGGTGAAGGATATTGAGGATGTGAATAAGATGAGAATGACTCTCTATGTTACTCATACCATGAACTTTCAGGATTACATGAAGAAACTTAAACGGAGATCCAAATTAGTCTTAGAGCTAAAGAAAATATTTGAAGAACTTGGTATCAGATACAATCTTCTTCCTCAAGAAGTTCGGGTTAGCTACGCGGGGNCGCTAACCAGTAGCCATCATGTGTTGAATATTAAACCCGATGTACACAGAGAACCAATTAAGCCCAATTTTCAGAAGTACCTAAGTTTGGTAAGTTTGTGTGAAATATGTTATAGTTTACATTTGTGGCGGTAAGTTTAGTATGTAAAATTTGGGGTAGTTGAAATGTGTGGTGACTGATGAGTTTGGGGAGTTGAAATATATGGGTATGAATGGGTTTTGCCTTCATGTATAATTTAAAAGGGCCCTGGGCGGTACCCATAAAGGGGTGGGGCTCCCCCGGAATATTGAATTCCCCTTAAATGGGGCTGGGTTGGGGTTGGGCCCCCCCATTTCAAGCCCCAAGGGGAAAATCCCCTTTTGATGGGGAAAAACCTGGGGCCCCATTGGGTTACAAGGGGGGGAACTTTTTTTAATCCAAAATTTGGGGAGACCAACCCTTTATAGGGGGTTTTTCCCACCAAGATTGGGGGACCCCCTTCCCCCGGAAAAAAACTCGCGGGGGGGGCAAAAAACACAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAGGGGGGGGCGGGCGGCCCATCATAGAGGAGGAACATCGCAAATAACTTTCTATATGCAGGAGGCAATGAGAGGGAAATGGAGAAAGGACAGGG



gi|188461962|gb|EY650939.1|EY650939 CS00-C1-100-016-D06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequ

TTTGGATTGAAGGGAGCTCT
.|||| |||||.|||.|||
GAACCGAACTTTCCTTGAGT

EST sequence (targeted fragment marked with yellow):
CTTGTTGTTTGGGATAAGATTTATGTTGCTAACGCGGGTGATTCAAGGGCTGTGATTGCTGTTAAAGATGGGAATAGAATTATTGCTGAGGATTTGTCTCATGATCAAACGCCATTTAGGAAAGATGAGTACGAGAGAGTGAAGGTTTGTGGGGCTAGGGTTCTGAGTGTTGATCAGGTTGAAGGGCTTAAGGACCCAAATATTCAGACGTGGGGCGATGAAGAGAGTCAAGGAGGTGATCCTCCCAGGTTGTGGGTTCAGAATGGGATGTATCCAGGAACTGCTTTTACGAGAAGTGTTGGAGATAGTACTGCTGAGAAAATCGGTGTGGTTGCAGTTCCTGAGGTGTCAGTGGTTCAGCTAACACCTAATCACTTGTTCTTCGTGGTTGCTAGTGATGGAGTTTTTGAGTTCCTTTCAAGCCAAGCTGTTGTCGATATGGCGGCAAAGTATACAGATGCCCGGGATGCATGTTCTGCCATCGCCGGAGAATCATATAAACTGTGGTTGGAGAATGAAAACCGGACAGATGATATTACCATCATCATTGTGCACATTAAAGACTTTTCTAATCTACCATCAGGAGCTGGTTATACTGATCCAACCAGTGGGGTCAATTTTAGGCCATCTATGCTGAAGAATGGCAAAGGAACTTCAGACACCGCTACCTCNGGATCAGAATTATTTCGTTCTGTCAGAAGTGAATGCTCAGATCTGCAGCACTCAGTTTCAGTGAACCGAATCAAGCTACTTTTGTTCACCTCTATCTCATCAAAAATCTTTAAAATGTGATTGTGGTAGAAGGCCTTCAAANTGCCTGCATCCTGCATATTTTATTCCTGAGNAGGTGGGATACAGTGCATNCTAAAGCTCAAAGCGATNATATTGCATATGGGC



gi|188443834|gb|EY652305.1|EY652305 CS00-C1-100-031-G06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequ

TTTGGATTGAAGGGAGCTCT
|| ||||||||.. |||||.
AACCCTAACTTTTGTCGAGG

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGCAATCTTCGATCTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTCTGATCTCGTGTTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCGTTCTAAAAGAAGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGATCTGAACGTGCCGTTGGATGACAACTTGAATATCACCGATGACAACAGAGTCCGTGCTGCTGTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAGTCATTCTCTCCAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTACAGCTTGAAACCTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGTTAAAATGGCAAACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTGAAATTCCCGAAGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAGGAGGAAGAGAAGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCACTGANGGTGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCNAAAGGAACTAGATTATCTTGTTGGAGCTGTTTTCAATCCCAAGAAACATTTGCTNGCATTGTTGGTGGTTCAAGGTGTCAACTAAGATCGGTGTTATTGAATCACTTTTNGGAGAGGGTGACATTCTATTGCTCGGTGGNAGGATGATCTTTACCTTTTANCAGGCCCAAGACACTCTGTTGGNTCATCCCTTGNTGAGGAAGACAGCTTGATCTCGCTACTCACTTATGGAGAAGCCNAATCTAAGGGGGGCTCTCTGCTCCTACTGATGGTGTAATGCTGACAGTTTGCTGCTGATGCAACACAGGTGGG



gi|188422113|gb|EY742281.1|EY742281 CS00-C3-705-011-B06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cD

TTTGGATTGAAGGGAGCTCT
||||| |||||.|| ||.|.
AAACCCAACTTTCCCCGGGG

EST sequence (targeted fragment marked with yellow):
TTGGGTTCGTGAACTGCAGTACGGTCCGGAATTCCGGGTCGACACCTATCTTCGTACAAGTGCATTTTCTCCCCTTTTGTATTCCGTTCACTCCCGGCAAGGAAGGTGCTGGACATTCGTTGCAGTAGGTGATGGGGTCACGGAATTCGCTCGGGGCGACCGAGTTGCCTACGTCGAGACATTGGGCGCGTATGCCGAACAATGCGTTGTGTCCGAACATTTTCTTGTGCATCTGCAGAGGCATTGTGTCCAACAACCGCCCGCTGCCTCAATGTTAAAGGGGCTGACTGCGCAGTACCTTCTGCGTCGCACGTTTCGAGTCGAGCCGGGCCACACGGTTCTAATTCATGCAGCCGCTGGGGGGGTGGGGCTCATTTTATCGCAATGGGCGAAACACTTGGGCGCCACGGTCATTGGTACGGTTGGAACACCCGAAAAAGCTGAAGGCGCTGCGGGATACAGCTGCGACTACGTCATTAACTATGGCGAGGAAAACTTCCCCGAGCGCGTGCGTGAAATCACCCCAGGGGCGAAGGTTGTGACGTTGTGGATGAACGGGGTGGGGAAGGCCACGTTCCCCTGCTTCGCTTGGCCTGCCTTTAAACCCCATGGGATGCTTTCCTGAGTTTCGGCGGTTCCTCCCGGCCCATCGAATCATTCCACTTCTGGATGCTGGCGGAAAAAGGGACTTTTTTAGCCCACCTGGGCCGGCCCTGACGCAATACCTTTGCCAAGCCAGAGGGATGTATCTCCCCTCTGAGGACAGGGGCCCCTTTCAACCCAAATGGGCCTTGGGGCGGGGTGGGCCTTGCCCCTTCTTTGAACAGGTGGCCGGTTTTCCGAAACAAGCCAACCCGCGCTCTAGATTTATTCCAATCTCCCCGAATTTCCGAGCTGGTAGGCACCTCTTCTTTCTTCTCCGCTT



gi|188423509|gb|EY714659.1|EY714659 CS00-C3-702-045-B02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cD

TTTGGATTGAAGGGAGCTCT
||||||||.||.|| ||||
AAACCTAATTTTCCGGGAGA

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGCGGACGCGTGGGTCCAAATCCTCCTTTCGAGGTGGATGGAGAATTCCTGGACAGAGCTTTGACATCAAAACAGAGAAATGCTTATACTTCCGTACTTTTTTATGCTTCCTGGTGCCCATTTTCTCGGGATGTGCGTCCTACTTTTGAAGCCCTTAGCTCAATGTTCCCACAAATGGAACATTACACAATAGAACAATCTTCAGCCCTGCCAAGTATATTTTCAAGATATGGGATCCATAGCTTGCCCTCAATTTTATTGGTGAACCAAACATCAAGATTGCGGTATCAGGGTCCAAAAGATCTGCATTCACTAGTACAATTCTATGAGAAAACCACAGGACTTGATCTGGTGGAGTATTTTGCTGAAGATGAATCAATCAGCTTGGAGGGGAGTGACCACCCATGGTTTGTTTCGTCAACGAGGGAGATTATCCAAAGAGAACCTTATTTGGTGTTTGGTGTATTGTTCCTTTGTTTGAGGGTGCTTGTGTACATATTCCCAGAGGTGTTACCCCGTCTCAAAGCTTTCCTGGATCTCCTATGTTCCACCACTTAAACTTGGAAATATTTGGTGAGACAAGTCCATTGTTTGGGGCGTGCGTTTCACATGGTTGATGGTAGGGAGGGTTTGACCAAACTGGAAATCTGTGAGACCAGGAACTTTCGTGAAGGGCAAAGAATGGCCCGGGTTTGGGCATCCTTCCTGGGTTCCGGCCCCCTAAGGGGGATCTTCCTCCACTAGGACCTCCTCCCTAGGGAAACTTTGCCCTAATAAATGAGCCACATCCGGGGAAGAGGGCCTTTTAATCCAAAATTGGACTGCAAATTGACCAAACCTTTCGGGCCGGGGAATCCCCCCCCTGTTAAAGGTCGGCCTTGAGTTAAAAAAAGGGAGGAGCACCNAAACTGG



gi|61689824|gb|DN620724.1|DN620724 UCRCS11_05L15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citru

TTTGGATTGAAGGGAGCTCT
|| ||||||||| .|||| |
AACCCTAACTTCATTCGACA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTAATTGAATCAAGGTTTGATACAACCAAAAATTGCGCAACTACAACAAGGAATAATTCACATTGGCATAATTAAAAAATCAAATTAGCATTGCTAACTGAAGTAGCCATTTAAGTACGATAAATAAATGGAAGAATCAGACCATTTTTTCTCTACACAAGTATTCTACATATCCTGAAAAATAAGCGAGAACAATTTCCGATCACTTTTTATGTGCTCCAACAGCTGGATTTTCATCTCGGTGGCTGCAACCGTCGATACTCGCATTTTGTCCGCTCTTCTCAGTTCTTGCTGCAATTTTTCCCTTTTCTACCAGCTCCAAGAGACCTTCTTTTTCTTGGAGTACACAGCCTGCTGTGCAAGTTCCATCTCTTTGACAGATCTGGAAATTTTTTGCATTTGTCAATATCCAATCTGGCATACTTGAAAAGCAAAGCAGAAATAAATCCAACTCCAACACCTGCAGACATTGAGCCAACAAAGGTCTCAAGAAACCTGACAATCACCATAAAGAAATTTTGCCCAAATGAAGCATGACTTCTCACTAAGGACATTGCCCTACATATCAAGAACAGCTTACTTCAATCCCAAATCTTAACCCACATAATGAACTAACTGGTTATGACAAATGCAAATTTTACATACCGGTACAAGGATATCGCCATCTACCATTTGTGACACATAGAAAAAGATCAATTCTCACACGTTAAATGTTTATTAGGATAAAACAGAAAATTCACTCGCAAGAAAATTGGACATCATAGCTATCAACAAAGACTTGCTGCATTG



gi|61687238|gb|DN618138.1|DN618138 UCRCS11_02C15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citru

TTTGGATTGAAGGGAGCTCT
|||||||||||.| | |||
AAACCTAACTTTCATACAGA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTCAGAACAAATTTTGGTTTTGGTGGGGACTTGTAATGATTCACAAGGCAATTTACACACTCAATAATACTCCACTTTACATCAACATATTGAATTAAAATTCATTAAAAAGGACAAATGAAAGAAAAGAAAACGATAAAGATTAACAAACGAAACAAGTGCTCTCTCCCACACACACACGCACACCCCAGTTGATTAAGAATCAGAACCCATCTGGCTACATCAAATCAGAGCTGCCCATCTAACGGTTGTAAATAAAAGATCTCATAACACATGATGCCCTTGGGATCTCTCAATCTGTCAAAACAAGTCAAAAGAAAAATTACAGAGCTTGCAAGAAGGATGATATTGATTCCTAAGTCTTTATCAAATTCTCCAATTGCTTTTGTAATCAACTGTATCCACAATGGAGACAAAATTTAAATTAGAATATAATTAACCAATAAAAAGATCACACAAATTAATGCGGGTCCCGATGGGTTGGGAGGACACAAAAAGACATACTTTCAATCCAAATCCTTGTTGATTTGGATACCCATTATCTATTAACTAAATATCTTATATCAGGATATTTTTTTCG



gi|188250859|gb|EY649707.1|EY649707 CS00-C1-100-002-F04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequ

TTTGGATTGAAGGGAGCTCT
||||.|||||||| | |||
AAACTTAACTTCCATGGAGT

EST sequence (targeted fragment marked with yellow):
CGTAATATATAAAAGCTACAAAATGCATAAGTAACCTAACCTTCTGCGACAATGAGGTACCTTCTGCGACTAGTTATATTATAATATTCCATGTTTCAATGTGACAATGAGGTACCTTCAATTCAAATTTTGCTTTGCTGTCTATTATTTTGTCCTCATTAAGGTGGAAGCCAGCAACGAAAGCCGCTGAATGTTAATTATTTCTATTTTTTACAGTTACATACTTTTTCCGGTCATATTACTTTGTCTTCAAATAGTACCGCATAGCAAAGTGAAGAAATACAAATATGTGCAGTGGTTGCACAGATAACCTTCCTTTTGAATTGCACTCATCCTGCAATTTTGATTTGATTTGTTCTTTGGTTGTCTTGAATTTCATGTAATGATGAGGCTGGTCAAGGGCTAAACTTGGTGTAGGAAGATGCAACTGCATACAACTTAGCTAGGCATCAGAGTTAGAACATGACAAGCTGGTCTTTTTTGGAAAGAAAATGGTGTACTATTTTAGAAATGTGCTATCTTCTGTTTTCCATATACAGTAGTTGGCCTGTAGATAAAACTGTTTCTTGTGTTTCTTTCCAGTCGAAGAATATCTAGTGTGAGATTTCCATTTANGAAGGGATTTCTTTTGTTGGATGTGTCTAACAATAAGGAAAAGTCCATGCCATCAACACAAATCCTCCAAGAATACGTGGATTGTGTAGTGCACCCATCCACATATCCCATCCCATACAGCCCTGTCAGCATTATTTGTTCAAATACTTTNGNNATTTGGATTCTTTTGTTTTCTTTCCTAATCAAGTTTTGCTAAAAAAAATTATGTTGATGATGTATTATGGCAGATATGAGCGATTCCTAAAACATGATTCTAAGGGGCTGAAGA



gi|188453271|gb|EY713247.1|EY713247 CS00-C3-702-028-G12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cD

TTTGGATTGAAGGGAGCTCT
|||||||.||||||| ||
CAACCTAATTTCCCTCTCGA

EST sequence (targeted fragment marked with yellow):
CCCGTCCCGACCCACGCGTCCGCCTCACAGCCATGGCAACAGCTATCGTCAGAAGTGCAAAAAATTTTCGAAACCTCCATCAACGTTTTTATTTCCACACTCTTCTTACCAAATGCCGCCCGCCAATTCCGTCACCAACAATCGCCGATAATATTCAGCATCGAGCTCTCCCTTTAATCCAACAGGCTATACCTTTTGGTATTGGATTCCAATCTTTCGTGGCTGATCAAAGATTTTCAAGCACCAGTACAACAACTGGCACCGTTCAATCAGGTCATTCAAAACCTAATTCTGAAGGAGGCGACAAGTCTGGAGACTCGAATCAGAGCAAAAGCGATACTGGGAAACCAATTCGCGGCGGGCCTATATCGTGGTTGAGTTTTCTGTTGCTGGCTCTAACGGGAGCTGGAATAATATGGTACTATGACAAGGAAAAGAAGCAACATATTGAAGGTACATTTCTATGAGATAAATAGTGCTTCTCAAGCAGTTAAACAAGGACCATCAGTGGGAAAAGCAGCCATCGGCGGGCCATTTAAACTTATAAACCATGATGGGAAGAATGTAACTGAGAAAGACTTTCTAGGGAAGTGGACGGTTATATACTTTGGCTTCACCCATTGCCCCGATATCTGCCCTGATGAGTTACAAAAACTAGCTGCTGCAGTTGATAAAATAAAGGAAAACTCAGGGATTGACATTGTGCCTGCTTTTATCTCTGTTGATCCTGAAAGAGATACCGCTGAGCAAGTGCGTGAATATGTCAAAAAGTTCCATCCCAAACTAATTGGGTTAACTGGGCAGCCGGATGAGATAACGAACCTCCCTCCCGCATACCGGAGTTACCTATATGAAAGACACCGAAGGAAAACTCGCGTTATTTTGTTGAATACTCCATAACGACGTTACTTAACGGGCCCTAAAATGGAAA



gi|57936004|gb|CX676163.1|CX676163 UCRCS08_67F02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis

TTTGGATTGAAGGGAGCTCT
.|||||||||||. | ||||
GAACCTAACTTCTGTAGAGA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTGTAGAAGTAAATAAAAAGATGCCTCCATACATTCTTTTGTCCCCCTCTGTCTTCTTGTAAATGCCACCAATCTCCGCAAACTCTTCTGGTTTTGCCCGGTAGTGGGGCTTTATTGGAAATATTTGTAGAGATTGAAGACAATTTAACTCGAATCAAAAGAGACCTTGACAAAGAAAGAGAAAAGAGTTTAATTCAACTTGGACTGCCCACAATGACCCTATTGAGATTGAGAGATGGCATTGGCAAAGTCATTTGTGGGTCTTGGACTCTGCTCTTTTTGAAGAGAGGCTCTGGTGACGATGGTGATGATAGGACTGATGATGATGCCACTGACCATGAATCGTTTGAGCTTTCATCACAGCTAAACACAGTAGCATCAATCACGCCACCAGGGCTTCCAGGGATTGCTTCAAACTTGCGCTTGTGAGGATTACTATTAGCATTGGTTTTTGCATTAGCCAGCTCAAGAATCAACTTGTAACAGTCACTTACTTTTTCCTTGCTTATTTTAAGCACACCTAGAAGCTGGTTTTGATAATCAACGGGATTCACAGGCTCAACTTGGTCTATTATGTGCATCATTGTGGCAGTGGCCAACACTGAAGGAAGGTAACTTACAGATCTTGAATCAGAGACCAAAGTGAGAAGCAGACGCTCACATCTCTTGAGAAACTCCCAGTGAAGAGATGTCTTCAATCCAAGCCTTCTTATGATGTGGTCAAGAAATGAAATTGGAGTCACTGGATGCATCTTCCATTCAAGTGTTGAGAGCACCAAAAGCTCCATTCTTTGTATGGCTTTGGTCTCAAAAACATATTTTGCCCCCTCAACTTGAAGGTCTAAGAGAAGGGGCACTTGGGTTTCTTCAACTT



gi|188376509|gb|EY705478.1|EY705478 CS00-C3-701-044-B05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD

TTTGGATTGAAGGGAGCTCT
||||||| |||..||||| .
AAACCTACCTTTTCTCGAAG

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGAACGACATGTCGAAGTAATGACAAGTGAAAATCAGACCCGTCGTAAGTATAATCTGTTTACAAACGCTATGAAGGAAGCTCTTTTCCATCCAAATCCCTCTACCTTTTGAATTGGCCGTTAGACAAAACACAGAAATGGCGAAAAGGAGAGACCGCCGAGTTGCACCGAGCCCGGGCCGTCCTAAAAACCGAGTCGAATCGGCTGCTCGATTAGACCAGTTCAGCGACTCAGCTTCCGATCGCAAGCTCATCACCATTTTCGTTATCTTCTTCATCGTGATTCCCACCGTGTCCGTACTCTTATACTGTACCAAATACTCTACACGCGCCAACCGTTCGGCGACTCACATGCATCAGCGAGGACTCGTCAAAACTGATGTGAATTACCAAGAAATCCTCACGGAGAATTCAAAGGTTTCAGAGAATGCGTCCCATCGGTATTACACGTATCCCGTATTGGCCTATATTACTCCATGGAATTCTAAGGGCTATGAACTGGCCAAGATGTTCAATTCTAAATTTACACACTTATCACCTGTTTGGTATGATCTCAAGAGCCAGGGAACTAGCTTAATCCTGGAAGGAAGACATAATGCAGATGCAGGATGGCTTTTGGAGCTTAGAAAAGGAGATGCCCTGGTGTTACCCAGAGTGGTTCTGGAAGCATTTCCAAAGGAGCTTCTCAGAAAGAAGAAACTGAGGGACAAAGCCATTGACCTTATATTAACAGAGTGCAAGGAAATGGGATATGATGGTATAGTGCTAGAGTCCTGGTCACGTGGACAGCTTATGGCATTTTGCATGATCCAGAATTGCGGATATGGCACTAGAGTTATAAAACAACTGGGAATGCGCTGCACAGGTGGACTCA



gi|56534902|gb|CX050611.1|CX050611 UCRCS09_33E04_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone U

TTTGGATTGAAGGGAGCTCT
|||||||||||||.|. | |
AAACCTAACTTCCTTTAACA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTGGGAGTTGAAAAGCCAAATCGATCATTATAAATTATTCAGTGATTGGAGATGCTCTGACGGCTCTCTTATATTAAAACTCATTTCAAAAAAACTTTACCAGCCCCCCCCTCTCATTCTGTCCTGGGCTTCAGCTGCCCTCTCCTCTTTCATCACTTGGACCATTTTGACAATGGTAGGATTATAAAAACGGGCACGGACATACTTCCTCTCCTTTGCTTGGATCTTCTTTATAGCACTAGGATATGGGTTAGGAGGAGGGCTCTTCCCCAAAAAAAGAACAATTTCCTTCAATCCAAAAAATGCGTTCTTTTTCATTTTCTTCTCTGCTCGATATTCCATGGCAGCCACTTGCATAGCTTCCTCCTCATTAACTCCTTGGTCTTTAAACTCAAGCACCCGCTGAACAAATAAACGGGCTGGAACTGGTTTGAAACCATTTATCTGGATGTCATCGTGATAAAGCGATTCCGGATGCTTCTGAAAAAACTTCTTTATGTAGACATCCTCTGGGAGAATAATCTTCTGAACTTTTCCTTCGGCACGTGGGAATG



gi|209924563|gb|DC887985.1|DC887985 DC887985 EIC Citrus sinensis cDNA clone EIC1215 5', mRNA sequence

TTTGGATTGAAGGGAGCTCT
||||| ||||||||||||.
TAACCTCACTTCCCTCGAGG

EST sequence (targeted fragment marked with yellow):
GTAAATTAACTTANTAATGAATTAAAAAAAAAAAAAGAAAAAATAAAAAAAGCTAGCGTTCTTGATCTGGTGGGTGCATATCAGTAACTTGATTGTTGAGCCAATAAGAGCCCTTCAGTACCTGGAAGAAAGATAACGCAGAACAATATAAATATTTCAGGGGAAAGGCCAGTTAGAATAATGAGATGTCCATGAATGGAGCTCCCTTCACTCCAATACCAAAAAGATCAAGGTAGCCTCGTCTCCCAGTTCATGCAAACCCTTAGACTGCGCCACAGTATTGAGTCTGCGCAACCACGGGTGTTCATGGACTAGCAGCCGTGGCCTACCATCACCTCCTTTCAGACTTGGAGTTCAGAGAGCTCCATTAAAACCCTAATTGCAGTTTCTAAACTACTAAACAAACTTCATTGCACCAACATAATATTGTAATGCTAAAACTTCAAAGCTATGCATGAAGTAAAAGAATAAAATTC



gi|56591850|gb|CX077860.1|CX077860 UCRCS08_5D12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis c

TTTGGATTGAAGGGAGCTCT
||||||||.||... ||||.
AAACCTAATTTTTTACGAGG

EST sequence (targeted fragment marked with yellow):
TCTAAATATTTTATCCATTCTACTTTGGAATATTTGTGGAGCATTTTTTAATCCAAAGGGCATTACTAACCATTCATAATGTCCTTGTGGAGTACTAAATGCTGTATAAGGAATACTATTTTCTTCCATTTTTATTTGCCAGAAACCTGATTTACAGTCAAACTTTGAATAATAAGTTTTATTTTTTACTAAATTAATTAGAACTTCTTTATTTGGCAAAAAATATCCATCAAATTTGGTATATTTGTTTAGTTCTCTATAGTTTATTACCATTCTAGCTTTCCCTCTAACTTGTTCTGCTCTTTTTCTAACCATGAAAGCTGGGCTGTTGTGTGGACTATTACTATTGCGTATTAAATTTAATCCTAATAATTCTTTTATCTGGATTTTAAATTCTTCTCGGTCTTCCTCTGTGTACATCATAGGTTTAAGTCTTATGATTCTATTTTCTATTAATTCTATTTTTGCTCTGGGGTGATCTGGTTTCCATAAGGCTAATGGATTTTCTTCATAGACTTGTTTAAGTTGGGATTTTATTGTTTCTAATTTTATATTTATGTTATAACTCTGTCCTTTTGAAATTAAATAATGTTTTTCATAAATTGTCTTATCACCACGCGAGGCTGGCTGAACTCGATAAGGGCGAAATT



gi|188267106|gb|EY657918.1|EY657918 CS00-C1-100-125-E12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequ

TTTGGATTGAAGGGAGCTCT
|||.||||||..||||.|.
CAACTTAACTTTTCTCGGGG

EST sequence (targeted fragment marked with yellow):
TTCCCCTATCCCCATCAACGAAAGAATGTTGGATATTTGGTCGTGGATATGTGAGCTCCCCTACTCAGACGAGTGGGCCGAGTCAGACTCACCATTCATACTTACACTAGCGAGCTCCTCTGCGAGTAAAAAGAACACAACTCGGGAGATTCAACTCAGAGCTGAGCGGACGTTCATGTCCGAAGCCGACGTTTCGTTGACTTTCAGTGTGTGCATAGAGGGCTTTGAATCTTTAGAGCCTCAAAAGACTATGTGGGTCTCTGACACGTGTCTTCTTTCTTCAGAGAAACCGTTTCTCCCGCTGGTACTCCAGCTTCTCCAAGAAATCATCACCCGTTCACCCCCGGCTCACGATAGCTCTTGTCCCCCGTTCTCAGCTTTCAGAAAGCTCAAACCCGAACCCATATCATGGATCATGGGACTCCCCTTCGCCCCGATCCTTTCTCAAGGTTTTTTTCATTTAATGGTTCCTCAAACCCTTGGGTTTTGGCATGGGCATGGGGGACGCCCCAATGGGGGTGGGGCTCTTTTCAATTCAACTCGGTATTGGTCCCCAAAAATGGAAAAGATAAAAGGGGGAAACCGGGCACCGGGACCTGGAAAAACTTTTTGGAAAAACAGAAGGAAGGGGAGGAAAAACTTTCCCTTTTCCCAAACCCCCACGGGTGACAGCGCGAACATTGTTTCGTTTTTTAAGGGGGGGGGGGGGCGAAGGTATACATAATGAAATTCCCGAGTGGTACATAAGGGGGCTGTTGGGATTTTCTATGGCCCGTGGTGAGCCACCGACGAACTTGGATTGAAAAAGGAGGAGGGGGGCGGGAGGAAGACGAGCAAGGAAAATGAACCCGGAGGAGTGGAGAAAAGAAAAGCGAGGGAGGAGGTATATGAACTGATTAACTGGGGACCGAAAAGAGAAATAGGAGGGGGAGGTGGTCATGTGGGTGATGAGGACGACACGAGAGGTGCAGAACAAAAAGGAGGGGGGGGAATATGAACAATTAAATACTGAGAGAATACC



gi|188309096|gb|EY703058.1|EY703058 CS00-C3-701-015-D03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD

TTTGGATTGAAGGGAGCTCT
||||||||||| ||| ||.
AAACCTAACTTAGCTCCAGG

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGAAAAGATGATGGCCTGAGGGAAGTTTTGCCAAAGACAAACCTGAAGGAAGTTTTTCCAAAGACAAGCCTGAAGGAAGTTTTGCCAAAGACAACAGCTGTGGATTCAACTTCTAAAAGTAGCAAAGATGTTGATATTGGGATTGCAGCTCGAGGCGTAGGAGTACTTCTCTCTTCTGTTGACCTCAATCTTCCACCGGTTGATTCTGCTCCATCTGGAAGCACCATGAGCATTGCTCCTCCTGCATCCAATATTACAGCTGGTGATGACCGGATGGATGCTAATGAGAATAATGTTCATCAAACTACCAGTGTTCCTATGTCCACAAGTTCTGTTGATCCTATGTGGCCTTCTGATGTAAATCAACCTCGTACTACTGATTTGGGTGGTAATCTTTCTACCAACTGCCCATTTAGTGGGATTCCAGTAGCAAATGAGTCTGCTGGTAGTTCCCGGCATCCTCGCCGTGGTCATTTCAAGCGGGGCTTTAATCGTGATGCCTTGATGGGTATGTTCCATAAGGGTGTTCGTTGTGATGGTTGTGGGGTTCATCCAATTACTGGACCTCGATTCAATCCAAAGTGAAAGATGATTATGACCTGTGCAGCATCTGCTTTGCAGCTATGGGAAGTGAAGCTGATTATATTAGAATCGATAGGCCGGTTCATTATCATATCGACCTCCACGACTTTCAGAGGGTTTATAACATAGACAAAACTTTGGCTGGGAACCCCAGCCCAGATACAAACATTGTGTGGCGCCTAGAACCTCCCCCTTTTTTAAGATTGGGGGATCAAACCTGGCCTGCCAAGGTGAACCGCCCTGTATTTGGGACTAGCGCATCGGAGCCGGAGGTGGGCCGCGGCCCCCTTTTAAAAAATGGAGGACC



gi|56592034|gb|CX078044.1|CX078044 UCRCS08_6F04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis c

TTTGGATTGAAGGGAGCTCT
|| ||||||||| . |||||
AATCCTAACTTCATACGAGA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTAGGATAATCAACTTCAAAGTAAATAAAAGTTGTTCAAAAGCGCTACAAGTCATTGGAGCTAATGGCTAAGATGCACAACAGACTAAACATCTTGAGGCCAATGGGTCCATTTGGAGATCATCGCTTACACATAAAAGACCAGAGCAACAAAATAGTTAGAAAATTACAAGCCCAGACAGAAGTTTGCTCCCAAAATTGCTTTATATAAATCCTGCCATTTCATTCAACTGCTGAATTTGAAGAGGGGCTGCCGGTAATCAATCATCAATAGAGAAGCAACTCCAATGCCTTCGATATTTAACATGCTTATGTACTTCGTTTACTTCACCCTGCCTTTTAGCATTTTGAGGCTATTTTGTAAAACTAGAACACTCTGCTTCGACTTGCCCATCCTTAAGATAAATACCCATGTTGGCTTGAGCATCAGCTTCAGAGTTCAAATTCCTCAAAATATGATTGATCTGGAATGATTGAAACTTCTCTTTGAGCTCCTTTGCTTCTTTGCACAAGCCAGCCAAATTCTGGTTATTTATCTTCCATAATCCTTGAATCTGCATACAGACAAGCTTAGAGTCTCCTTGGACACGAATATGTTTATATCCTTTCTGAAGAGCATACTTCAATCCTAAAATTAAAGCTCGATATTCGGCAACATTATTCGTTGCAATGCCCACTCCTTCCCGAAGTCGGTAGACCACATTGCCGTCTTCAGCACGCAAAACTGCTCCTGCACCAGCTTGTCCAGGATTTCCTTTTGAGGCACCGTCAAACT



gi|46213978|gb|CN189039.1|CN189039 UCRCS06_0001D14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA

TTTGGATTGAAGGGAGCTCT
|||||||||||||| . ||
AAACCTAACTTCCCCTTAGC

EST sequence (targeted fragment marked with yellow):
CCGCTTGTTTGTTTGTTAGCTTTCTACGGACGCGCGATTCCCCTTCAATCCAAAACTAATTAAGAGTGAAAGATGGATAACTGGAAATTAAAAGAGCATCCACAGCTGTCGAGGAATAACATTGTAGCCGTTGTGGTGTTGGATGGCTGGGGCGAGTTCAAGCCCGACAAGTATAACTGCATCCATGTCGCCGACACTCCCACCATGGACTCTTTCAAGAAGTCTGCCCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTCCAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGTGCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGCCTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTTTTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTACACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCGTGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTTTGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCAGAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCGCCTGTACGTCACGATGGACCGTT



gi|188400482|gb|EY719280.1|EY719280 CS00-C3-702-103-B11-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cD

TTTGGATTGAAGGGAGCTCT
||.||||||||||| || |
AAGCCTAACTTCCCAGGAAA

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGTGAAGCAAGGGCTTCTTCAATGGAGGAGTCCTTGCCACTGCACACATTTTCTTTCTCCCCTCTCTATTCCTTCAGTTTCCATTCGTATCTCGAGAACCAAACACGCCCCAATGCAACCCATTACCGCCACCGTAGATTCCCAGCAACAGCAGCAGCTGTCGGCCAGAGAAAGAAGGCAGCTAAGAAACGAGCGGAGAGAGCAGAAAGCTGGTTACAGCTGGAGAGAAGAAGTTGAAGAGAGGCTTATAAAGAAGCCCAAAAAGAGATACGCTTCTAAGACTGAAGAGATGAATCTTGATACCTTGGCTGACTTGGGTCCCCGATGGTGGATCGTTCGGGTTACCCGGATTCGGTATGAAGAGACTGCCGAACGTCTTGCTCGATCACTGGCTAGGAATTTCCCGGATATTGACTTTAAGATGTATGCTCCATCTGTTCAGGTCAAAAAGAAACTAAAAAATGGTTCCTACTCAGATAAACCGAAGCCCATTTTTCCTGGGTGTGTTTTCTTAAGATGTGTGTTGAACAAAGAGAGGCACGACTTCATAAGAGAGTGTGATGGAGTTGGAGGTTTTGTTGGNTCGAAAGGTGGAAATAGAATAAAACAGATAAGCAAACCTAGACCACTGTCCGTTGATGATATGGAAGCCATTTTTAGGGAGGCCAAAGAAGCACAGGAACAAGCTGATCCAGCTTTTTGGTGAAAAGCCGCCAAGAAAAAGGACCCTTCAATCCGAAAATCTCGATGGAAAATCAAATAAAGGGACCACTGGTGGTACGGAACCTGTTAAGAGTTCCAGGCCAAAAGCCATTCTGGAAAAATTCTGCAAAAGAAAAAAGCTCCAGGCCCCGGTTCAATGGTCGACGTTGATCCAGCGCCATTGCGGAATTTGTGGGGCCTGAGAAATCGATCTCNCCACGAAAAGGACATGGTGGAAGGCCT



gi|188341236|gb|EY745620.1|EY745620 CS00-C5-003-015-F07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA se

TTTGGATTGAAGGGAGCTCT
.|||||| |||||||| | |
GAACCTACCTTCCCTCAACA

EST sequence (targeted fragment marked with yellow):
CGGACGCGTGGGCGGCCAAGACGGCTCCTACTTAACGGAATTCCTCCTTAACAAGGGCTACGAAGTCCACGGCCTGATCCGACGGTCCTCCAACTTCAATACGCAGCGTATCAATCACATCTACATCGACCCACACAACGCCCACAAGGCCCGAATGAAACTCCACTACGCCGATCTCACCGACGCGTCGTCTCTCCGTCGCTGGCTCGACACCATTCTCCCCGACGAAGTCTACAACCTAGCTGCCCAGTCTCACGTGGCAGTATCCTTCGAGATCCCCGATTACACGGCCGATGTTGTGGCCACAGGAGCTCTCCGTTTGCTCGAAGCTGTTAGATCTCACATTGCAGACAGTGGAAGGTCCCACATCCGTTACTACCAAGCCGGATCATCCGAAATGTTCGGATCCACTCCGCCTCCGCAATCCGAGACAACTCCCTTCCATCCAAGATCTCCTTACGCTGCTTCGAAATGCGCTGCCCATTGGTACACTGTAAATTACCGCGAAGCTTTACGGGCTTTTCGCGTGGAACGGAATTTTATTTAACCACGAATCGCCTAGACGCGGCGAAAATTTTTGTTACTAGAAAAAATTACCCGTGCGGTTGGGAGGATCAGGAAAGGAATGCAAACTAAATTGGTTTTGGGAAATTTAGCAACCGTCGAGGGATTGGGGATTTCCAGGGAAAATACCTGGAAGCAATGGGGAATGATGTTTGCACCCGGAAAAACCGCATGATTAACTGGCTGACGAACGGAAGGAAACAAAAAAAGGGGGAGAAGTTATTTGAAGGCGACAATTGGGGATAGTGTCGGTCACATTTACGAGAGAAACATGAGGGAAAATGACAAGAGAAGAAATGTGAACCCGCAAAAGAGTATAGAAAAATAAAAAAAGC



gi|188273351|gb|EY742473.1|EY742473 CS00-C3-705-071-D01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cD

TTTGGATTGAAGGGAGCTCT
.||||||||||...|.|| |
GAACCTAACTTTTTTTGACA

EST sequence (targeted fragment marked with yellow):
GCTGGGGATTCTGTTCTTTTTATTTGGAATGAAAAGAATCAGCTTCTTTTGGGAATTCGCCGTGCTATTCGCCCACCAACTGTAATGCCATCATCTGTTTTGTCCAGTGATAGCATGCACATTGGACTCCTAGCTGCTGCAGCTCATGCCGCTGCAACTAACAGTTGTTTTACAGTTTTTTTCAATCCAAGGGCAAGTCCATCTGAATTTGTAATACCCCTGACAAAATATGTCAAAGCAGTTTTTCACACACGTGTTTCTGTGGGAATGCGGTTTCGGATGCTTTTTGAGACTGAAGAATCAAGCGTTCGTAGGTACATGGGTACAATAACTGGCATTAGCGATCTGGATCCTGTTCGATGGTCTAATTCGCACTGGCGATCTGTCAAGGTTGGTTGGGATGAGTCAACAGCTGGTGAGAGGCAGCCAAGAGTATCATTGTGGGAGATTGAGCCTTTAACAACTTTCCCCATGTATCCATCATTGTTTCCTCTCAGACTGAAACGACCATGGCATCCTGGCACATCATCTTTTAATGATAACAGAGATGAAACAAGAAGTGGCTTAAATTGGGTAAAAAGGTGGAACTGGAGAACAGGGTCTGACGACCCTGAATTTCCAATCTCTTGGTATGTTTTCCTGAATGCAACAAAAAAGGGAACCATCATTTCCTTGGAAATGATCACAATCCCCAAAACCCAGCAATGTTGGCAGCTGGGATGCAAAGGGGAAAATCCCGTGAAAAAACAATTTTTGCAGTTGGCACAACCCTTTTCAAATTTTTTCGAAATTTGGGCACCAAAAACCCTTTGCAGTTGAAAACAACAACCGGG



gi|188343310|gb|EY704126.1|EY704126 CS00-C3-701-029-D12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cD

TTTGGATTGAAGGGAGCTCT
.||||||..||.|| ||||.
GAACCTAGTTTTCCGCGAGG

EST sequence (targeted fragment marked with yellow):
CCACGCGTCCGGAAGAGAAGATGGCCCTAAGTTTCTGAATGCATATTGGGCTGATCTTCATGGCCTTATATACAATACTCTGCCACCTGAAATATTTTTATGGGGTCACCAGTACCTCTCTTTCTGTATTTCTGAAGACAAATTAACTGTCAAAGTTAGAGCTAAGGATCTTCAGACTGCTGAAATAATCGAGATAGTAGGAGATTTGCTCGTTGGAGCAGATGGGATCCTCTCATCAATTGGTCGGAGCATTCTACCTGACTTCAAATTGAGGTACGCAGGATACTGTGCGTGGAGAGGTGTTTTTAATTTTTCAGAAAGCAATTCAGAAACCATCTTACGCTTTCGAAAATCGTATCCTGATATTGGGAAATGCCTTTACATTAATATTGGTTCAGGATCTCACATCATAGTCACTGAGCTTAAGAAAGAGAAGCTCAATTGGGTTTGGTATGTCAATCAACCTGAGCCCGAGCTCAAGGGAAATACAACTTCTGTGAAAGTAAGCAGTGACATGATCGAGGAGTTGCACCAAAGAGCAGAGCAGGTTTGGTTACCTGAATTGTCAAGAATGATCAAAGAAACAAAGGATCCTTTCCTTAATGCTATATATGATCGGGATCCTTTGGAGAAAATCTTCTGGGACAGAGTGGTGCTAACAGGAGATGCAGCTCACCCGACAACTCCACACTCTGCCAGAAGCACAGACATGGCGATAATAGATGCAGCAGTGTTAGGAAAATGCCTCGAGAAGTGGGGGCCGGATCANTTATACTCTGCTCTGGAAGATATGAATCCATTTAGAAGCCTGTACCTCAGCACAAGTCTATATGCGCGACGATTGGGTCAAATGAACCAGGCGTTAGTATTCCTGGAAGGAGCGCCTTTTGATCCAAGACAGCAG



gi|46216465|gb|CN191526.1|CN191526 UCRCS06_0005F17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA

TTTGGATTGAAGGGAGCTCT
.|||||||.||.|||| | |
GAACCTAATTTTCCTCTAAA

EST sequence (targeted fragment marked with yellow):
CCTTTGTATCCAACCCAGCGAATGGTTCTTTATAAGTGCTCTGAATCATACTAGGTCGAATGATCACAACCGGTATATTTTCTTTCAAGGTATCAATCATCATTTCGCCCATAGCCTTTGTGAAAACATATGTGACATCCCATCCATATTTTCTTGCCCTTTCTAAACCCAATTCCTTCATTTTCTTTCGAGCGTCTTCATCATTTTCAAGGGCTTTTTTGGATTTCATAGCCAACTCTATTTCTTTTTCAACGTCCAAATTTGGTTCAATTTTGGAGTTATTGAAGTTTAATTCCCTTGCTATCGTATCCCCCATGTAGAAGGGCTTTTCCATAATCCTTCCTTGTCTCTTTCCATCATTAACATATGCTGTCGACATGTGCACAAAAACCTTAATCTTCTTGCACTTTTTCGCAAAATTCATGACATGGGAAGGTCCTCTTGTGTTTATATCGATAGCAATGTCATATCTTTCGTGTAAGGTTGTATTAGCTGCAGAATTTATAATTACGTCGACTTCATTTGCGATCACTTTGGCCAAATCTCCTTTTAATCCAAGGTTACTTTCACTTATATTTCCTACCACAGGAACCAATTTATTTAACATGAAATCTTGGTAGCATTCCCCATAAGTTTGCTGAAGACACTTGAAAAGTTCCGCATTGATGACTTCATCTTTTAATCTTTTCGATGCAGCTTCTTCACTTTCTGCCTTGATCAAAAGAAATATCTTACCCACCTCAGGCGCTGTTCGTAATATCTTCTCTATAAGAACCTTTGCGAGAAACCCTGTTGCCCCAGTAACAAAAAAGCTCTTCTNCTACAAAAATTTTTCAATACCAATACCGTATTGCTTTGGGT



gi|56590015|gb|CX076025.1|CX076025 UCRCS08_48D05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis

TTTGGATTGAAGGGAGCTCT
|| ||||||||||||. ||.
AACCCTAACTTCCCTTTAGG

EST sequence (targeted fragment marked with yellow):
GGATCATGAACTTTGCTGCGGCTTTGTTACAACTTTGTTGGCTGCAGAATTTTAGGCTTAGCCGCATAACTTTGCTGGATCATAAATGTCGATTTTTCTTCTTAGTTAGCCAATGTGAAAATCTGCCTTGATAAGATCAGTTTTAAACCTGCTAAACAATCAGGTGAAATTAATGAGATGCCTTCTAGTGAAATAGATTTCGTAAATCATTAAACAAAAGTAAGTTTTGGTCTATTTGGTTCATAATTATACTTTGACATTTGCTGGGCATTCACTACTGGGCATTCAGTGGTCTATTTAAATGCTCTTATGGTACTACCATTAACATACCATGACTGCTTTACCCATAAGCAGGAGTAATCTTCCTCAAAATCAAGATTTATGAAAATATGCCAATTATCGAGGAGGGACGCTTCGGATTTCCCTTCAATCCCAAAGATGCAAAAAAATTGCGAATAATTTCCATGCAAGGTCGGTTATAAGAGAATTTACCGACCAATGAAAATTTGAAGGAAGTGGCTATCACTTAAACTTCCATAGCCAAAAATTGCAAGAAAGGCTCACCCTCAAATAAAGAGACGGTATTGATTGGAACTGTCGTGACAATGGACCCATTAATAGTATCCACGAATGATTTTGTTGGACGATCATGTTGATTCCGATTAGCCAGGAACTCAACATTAAGGCGTAAGAGGTAGGCTTGAGTGTGTGAGGAGTTGTGCATGTGTTGCATGCACTTGGATGATTACACGTGAGGGCA



gi|188361750|gb|EY741356.1|EY741356 CS00-C3-705-083-G07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cD

TTTGGATTGAAGGGAGCTCT
.|||| |||||.|||.|||
GAACCGAACTTTCCTTGAGT

EST sequence (targeted fragment marked with yellow):
CACGCGTCCGCCCACGCGTCCGAATTTTGTTCAGCAAAGATTGGTAGAGGAATTGGCAAATAATCCCTTGTTGTTGGATGATCCTGTTAAAGCTTATGATTCAGCTTTTTTAACCGTCAATGATGAGCTGCATTCAAGTGAAATTGATGATACAATGAGTGGTACTACCGCGATTACAGTTCTTGTTGTCGGGGATAAGATTTATGTTGCCAACGTGGGTGATTCAAGGGCTGTGATTGCTGTTAAAGATGGGAATAGAATTATTGCTGAGGATTTGTCTCATGATCAAACGCCATTTAGGAAAGATGAGTACGAGAGAGTGAAGGTTTGTGGGGCTAGGGTTCTGAGTGTTGATCAGGTTGAAGGGCTTAAGGACCCAAATATTCAGACGTGGGGCGATGAAGAGAGTCAAGGAGGTGATCCTCCCAGGTTGTGGGTTCAGAATGGGATGTATCCAGGAACTGCTTTTACGAGAAGTGTTGGAGATAGTACTGCTGAGAAAATCGGTGTGGTTGCAGTTCCTGAGGTGTCAGTGGTTCAGCTAACACCTAATCACTTGTTCTTCGTGGTTGCTAGTGATTGGAGTTTTTGAGTTCCTTTCAAGCCAAGCTGTTGTCGATATGGCGGCAAAGTATACAGATGCCCGGGATGCATGTGCTGCCATTGCCGGAGAATCATATAAACTGTGGTTGGAGAATGAAAACCGGACAGATTATATTACCATCATCATTGTGCACATTAAAGACTTTTCTAATCTACCATCAGGAGCTGGGTATACTGATCCAACCAGGTGGGGGTCATTTTAGGGCATCTATGCTGAAGAATGGCGAGG