| mature miRNA: TTTGGCTTGAAGGGAGCTCCC species: Picea glauca database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|225916018|gb|GO367819.1|GO367819 GQ03803.SP6.r_C14 GQ038 - Stem - Active growth Picea glauca cDNA clone GQ03803_C14 3', mRNA TTTGGCTTGAAGGGAGCTCCC EST sequence (targeted fragment marked with yellow): GGCAAGAGTTTTCTTGTCTCGCAGTGCAGAAGTGATACTCTGTATGTGACAGACCCGTGTGAGCATCTAGACCAAGGAGAGGATGGCGACGTGGGATTATTTCGAGGAGTATTTAAGGCTTTTGGGAAATCAAAGGTAAGGAAAATGCTGATTGAAAATCATGTAGAATTGCATCCAAGAGAAATTTGCCCATATTGTCGGGCCAAGGTATGGAGCATGCTTCAAGCCAAAATGATCCCTAAAAGTGCACACAGAAGATTGGGATCTTATGAAGACCAGGTTGAGTATTTTGTATGCCTTAATGGGCACTTGCTTGGAGTCTGCACACTTTTACCGCTCTCAGATTCTGAGACTGCATCGGAAGAAGACTAATGTCTGAAACAGATTCTCTCCAAGGTTTTTCCTTTTGCTTGTAGTTGAATTTCTCTAGTGGACGCTTTCAACATATGACAGTTCCTGTTCTATTTGTTTCTCAATAGGCATCCCTCACAGCATTGTATGTTCATATGAGGGATTTAAAATTTGTCTGTCATTACTTAGTGAAGAAACAATTCACAAGGCATTGTGGAATCAAGAGAAGGTCTCCAGAACAGAAGAAAAATAAACTGGAACATACTCATCTAGTCTTGTATGGATGTAAGATGGTCAGTTTGAAGGGATGAATAGCATCTAACATCTTTTATTGACCCATATATTGATGTGGCCTGCAGCCTACCAGTTTATAAATTATTGAGCTAGTATTTAGCAGAGGGCAAAAAA | |||||||||
gi|211896880|gb|DV988813.2|DV988813 GQ02013.TB_G02 GQ020: Clean ROOTS systems -Diurnal cycle Picea glauca cDNA clone GQ02013_G02 TTTGGCTTGAAGGGAGCTCCC EST sequence (targeted fragment marked with yellow): GTGGGATTATTTCGAGGAGTATTTAAGGCTTTTGGGAAATCAAAGGTAAGGAAAATGCTGATTGAAAATCATGTAGAATTGCATCCAAGAGAAATTTGCCCATATTGTCGGGCCAAGGTATGGAGCATGCTTCAAGCCAAAATGATCCCTAAAAGTGCGCACAGAAGATTGGGATCTTATGAAGACCAGGTTGAGTATTTTGTATGCCTTAATGGGCACTTGCTTGGAGTCTGCACACTTTTACCGCTCTCAGATTCTGAGACTGCATCAGAAGAAGACTAATGTCTGAAACAGATTCTCTCCAAAGTTTTTCCTTTTGCTTGTAGTTGAATTTCTCTAGTGGACGCTTTCAACATATGACAGTTCCTGTTCTATTTGTTTCTCAATAGGCATCCTTCACAGCATTGTATGTTCATATGAGGGATTTAAAATTTGTCTGTCATTACTTAGTGAAGAAACAATTCACAAGGCATTGTGGAATCAAGAGAAGGTCTCCAGAACAGAAGAAAAATAAACTGGAACATACTCATCTAGTCTTGTATGGATGTAAGATGGTCAGTTTGAAGGGATGAATAGCATCTAACATCTTTTATTGACCC | |||||||||
gi|225918313|gb|GO368223.1|GO368223 GQ03810.SP6P1_F04 GQ038 - Stem - Active growth Picea glauca cDNA clone GQ03810_F04 3', mRNA TTTGGCTTGAAGGGAGCTCCC EST sequence (targeted fragment marked with yellow): GTGGTGGAATATCCAGAGAGGCCCAAAAATGAGTAATAAGGAGGTTCATCTGCCTCCTGGGTCGACTGGATGGCCGCTTATTGGAGAAACCTTCAGTTATTATCGCTCCATGACCAGCAATCATCCCAGGAAATTCATCGACGACAGAGAGAAAAGATATGATTCGGACATTTTCATATCTCATCTATTTGGAGGCCGGACGGTTGTATCAGCGGATCCCCAGTTCAACAAGTTTGTTCTACAAAACGAGGGGAGATTCTTTCAAGCCCAATACCCAAAGGCACTGAAGGCTTTGATAGGCAACTACGGGCTGCTCTCTGTGCATGGAGATCTCCAGAGAAAGCTCCACGGAATAGCTGTGAATTTGCTGAGGTTTGAGAGACTGAAAGTCGATTTCATGGAGGAGATACAGAATCTCGTGCACTCCACGTTGGATAGATGGGCAGATATGAAGGAAATCTCTCTGCAGAATGAATGTCACCAGATGGTTCTCAACTTGATGGCCAAACAACTGCTGGATTTATCTCCTTCCAAAGAGACGAGTGAGATTTACGAGCTATTCGTTGACTATACCAATGCAGTGATTGCCATTCCCATCAAAATCCCAGGTTCCACCTATGCAAAGGGGCTTAAGGCAAGGGAGCTTCTCATAAAAAAGATTTCAGAAATGATAAAAGAGAGAAGGAATCATCCTGAAGTTGTTCACAATGATTTGTTAACTAAACTTGTGGAAGAGGGGCTCATTTCAGATGAAATTATTTGTGATTTTATTTTATTTTTACTTTTTGCTGGACATGAGACTTCCTCTAGAGCCATGACATTTGCTATCAAGTTTCTTACCTATTGCCCCAAGGCATTGAAGCAAATGAAGGAAGAGCATGATGCTATATAAAATCAAAGGAGT | |||||||||