mature miRNA: TTTGTTGGTGGTCATTTAACC species: Saccharum officinarum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|36002453|gb|CA278502.1|CA278502 SCCCSD2089F07.g SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCCCSD2089F07 5', mRNA seque TTTGTTGGTGGTCATTTAACC EST sequence (targeted fragment marked with yellow): ACGCTCTTGGCTACAAGACCACCAACAAGACCATCAGAGACGGAAAGTCCAAGTTGATCATCATCGCCGGCAACTGCCCACCTCTGAGAAAGTCTGAGCTCGAGTACAACGCTATGCTTTCCAAGACCGCCGTCCACCACTACGCCGGAAGCAACATCGATCTCGGAACTGCTTGCGGAAAGTACTTCCGTGTCGGAGTCCTCTCCATCACCGACGCCGGAGACTCTGATATCATCAGATCCATCCCAGGCAATGAAGCCGAGGAGCCTCAGGCCCCTGCCCCCGTTGCCAAGAAGGACGACAAGAAGGCTGCCGCCCCCGCCAAGAAGGCCGCCGCTGCCCCCGCTGGTGGAAACAAGAGAAAGACTGCCCTCTAAGTTGCCTCTTTGCCTGAACGGAAACCATAAATTGAAAGTCC |