miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TTTGTTTGGTTGCTGAGAACA
species: Gossypium hirsutum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|109858931|gb|DW487910.1|DW487910 GH_RMIRS_066_E06_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTTGTTTGGTTGCTGAGAACA
|.||||||||| |.||||||
AGACAAACCAAGGGCTCTTGC

EST sequence (targeted fragment marked with yellow):
TACAAGTGGCTGTTGAAGTCTTTGTTAGTTGCCGAGGCATATCTCGGTCGACTCAACTCCACTCAGTCCGATCCATGGCGTCTCTTCACCCCACGATATCTCCTCAAAGCCTCCTTTCTTTAACAAAACCCCGAAAACCCATTTCGAGGCACCTCTCAGCTTCCTCATTAACCACCTCAAAACTGCCCGAGGGCCTTGCGTTCTCGGGAACCAAACAGAAAAACAAAAGGGAAAACTCGGTGGTGGTGGTGAAGTCATTAGCCGAGGAGCTTGACGTGATACCAGTTCAAAGTGAGGATGTTACAGATATACAAGAAGGAGTTGCGGTGAGTCAGGCGCCGAGAGAATCGTCAGGAGGAGAGTTAGTGACTCAAGTAGGTGGGTTTAGCAATGAAGGAATGTTATCTTTTGAAGGGGTTTCTTCTTCAGGTTCACCTTCAGGGAACGGATTTGGTGATGGACAAGGAAGTCAAGAGGAACTGGATAGGCTTATGGATAGAATTATTAATGCTACTATTGTTCTTGCTGCTGGTACTTATGCCATCACCAAGTTGCTTACCATTGATCAGAATTATTGGCAGGGATGGGCTATTTATGAGATAGTAAGATATGCACCTCAACACAATTGGAGTGCTTATGAAGAAGCTTTGAGGACAAACCCTGTTTTAGCGAAAATGGTTATCAGTGGAATTGTCTATTCTATAGGGGATTGGATTGCGCAATGCTTTGAAGGTAAACCTCTATTTGAGTTTGATCGTATGCGGATGTTCAGATCTGGCCTTTGTGGCTTTACTCTACACGGTCCACTTGTC



gi|109889567|gb|DW518535.1|DW518535 GH_TMIRS_222_A01_R Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTTGTTTGGTTGCTGAGAACA
.||.||||||||||||||| |
GAATAAACCAACGACTCTT-T

EST sequence (targeted fragment marked with yellow):
CTCTTTCAAGAAAAGAGTGATCTTAGTACCTCTACCAATGCTCTCTCCAGTGGTATCCCTAGTGACAGTGAACGAACCCCCAGCTTGAGACTCCCACACATACTGCTCATCGTCATTGTGCTTTGTGGTAACAACAACTTTCTCAGCAACCAAATAAGCTGAGTAGAAACCAACACCAAATTGTCCGATCATACTAACATCTGCACCAGCAGCCAATGCCTCCATGAACTCCTTGGTGCCAGACCTTGCGATGGTACCCAAATTGTTCACCAAATCAGCCTTGGTCATGCCAACACCACTATCAACGATTGATAGGGTGTTATTAGTCTTGTCTGGCACAATATGAATGAACAACTCTGGCTGAGCATCAAGCTTGCTCTTGTCTGTCAAAGACTCAAATCTGATCTTGTCTAAGGCATCGGAAGAATTGCTGATGAGTTCACGAAGAAAGATCTCCTTGTTACTGTAGAAAGTGTTTATAATCAAGCTGAGAAGCTGATTGATCTCAGCTTGAAAGGCAAACGTTTCAGTCTCCGCCATTGATGATAAATCTAAAATGACGATACCAAACACAACCTAAAGAAATATCAGAAGCAGAAGCGAATGGTTAGGTTAAAGTTT



gi|73846661|gb|DT455681.1|DT455681 GH_ON02B10.f GH_ON Gossypium hirsutum cDNA clone GH_ON02B10 5', mRNA sequence

TTTGTTTGGTTGCTGAGAACA
||||||||||||||||||| |
AAACAAACCAACGACTCTT-T

EST sequence (targeted fragment marked with yellow):
ATCGAATTTCTCAGCAACCAAACAAAATCTTCCATTGTCTTCTAGAACTTTCCAAGCACACTAGAGTTAATCAATGGCTCGTACAAAGCAAACAGCCAGGAAATCAACCGGTGGAAAAGCTCCACGTAAGCAACTGGCGACGAAAGCCGCGAGGAAATCAGCTCCAGCCACCGGAGGAGTGAAGAAGCCTCACCGTTTCAGGCCAGGAACAGTGGCGTTGAGAGAAATCAGGAAGTACCAGAAGAGTACCGAGCTTTTGATCCGTAAACTTCCGTTCCAAAGGCTAGTAAGGGAAATCGCTCAAGATTTCAAGACGGATCTGAGATTCCAAAGTAGTGCGGTGGCGGCTTTACAAGAAGCGGCGGAAGCTTATCTGGTTGGCCTGTTTGAGGATACCAATCTCTGTGCTATTCATGCCAAGAGGGTTACTATTATGCCTAAAGATATTCAACTGGCTCGGAGGATTAGAGGAGAGAGAGCTTAAATAATGTATATGGTGATTTGCTTTGAATGATTTATGCTTTTAGGATCTGTGTTGGTATGTTTTCTCTAGATGTAGATCTCTC



gi|78327256|gb|DT547530.1|DT547530 EST1058170 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
ATCAGTTTCTCATCAACCAAACAGAAAATTTCAGTCTAAAATTCGAATTGTCGTTTTCTAAGTTAAAATAGAAGGGGAGTGAGGGATTGAGACTGATAGCGATAAGGAGATACTGTTTTTTATTTGATTTAGCGAAGGATGTCTGCGGCAGTGTGCGGGAGCAAGAGATCGTTCTTCGAAGATATCCCGTCACCGCCATCGGCTTCTTCCTCTAAGAAGCTTCGGCGCTGCTCGCCGTCGTCTCCTTCTTCTGTTCGTTTATCTCCGTCGCCATCTGCTCTCAATCACCTCCAGTCTATCTTCCCTCACATGGACCCCCAGCTTCTGGAGCAAGCGCTATTAGAATGTGGCAATGATATAGACACTGCCATCAAGAAGCTGGAGGATCTTTGCTTAGGAGCAGCAGAGGCTAGAGGGGGAAAGACTTGTACCGTTGAGGAACTGGGCACAACTACTGAGCAGGGTATATTGACTAATAATGGAGAAGCTGCTGCTGCTGCTGCTGCTGTGACTATTCAGAATCCATCAGCCTCTGAAAATATGCCTGCTGATGGTGCTGAATGGGTGGACTTGTTTGTGAGGGAGATGATGAGTGCTACAAGTGTGGATGATGCCAAATCCCATGTCTCTAAATTGCTTGCAGTTTTGGAGAATTCCATAAGTAAATGTGTTGCAGAAGAGACGGTACAAAATTTTCAAAAGGAAAATCTCATGTTAAAGGGACAAATTGAAGCGATGATTCAAGAAAATACAGTCCTCAAACGTGCAGTGGCAATCCAACATGAACGACAAAAGGAGTATCAAGAT



gi|164362183|gb|ES821033.1|ES821033 UFL_375_45 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
CAAAGCCAACACCNTTTCGAGTAGAATCCCATCAAATTTCTCATCAACCAAACAGAAATCTCATCCCCCTACAACCCCACTTCTCTTTCCAAATTAGATAGAAAGAAGGTGAGGGATTAACATTGATAGAGGTAGAAAGAGAGTTCTTCTTTGATCTTGCGAAGGATGTCTGCGGCAGTGTGCGGGAGCAAGAGATCTTTCTTCGAGGATATCCCGTCATCGCCATCGGCTTCTGTCTCTAAGAAGCTCCGGCGCTGCTCGCCTTCGTCTCCTTCTTCTGTTCGTTTTGCTCCGCCGCCTTCTCTCCTTGATCACCTCCAAGCTCTCTTCCCTCATATGGACCCCGAGCTTCTGGAGAGAGCACTACTTGAATGTGGCAACAATATAGACACTGCTATCAAGAGGCTTCAGGAACTTCACTTAGGAGCTGCAGATGCTACAGGGGAAAAGATGGGTCCTGTTGAGGAACTGGGTACAACTGCTGAGCAGGGTACAGTAACCAACAATGGAGAAGCTGCTGATACTACTGCTCAGATTCCATCGGCCCCTGAAACTCTGCCTGTTGATGGTGCAGAATGGGTGGACTTGTTTGTGGGGGAGATGATGGGTGCTTCAAGTGTGGATGATGCCAAAGCCCGTGCCTCTAAACTGCTGGAGGTTCTGGAGAAGTCCATTAGTGAAAACATTGCTAAGGAGGCAGCACAAAGTTTTCATAAGGAGAATATGATGTTGAAGGAACAGATTNCAGTGTTGATTCAAGANAACACGGTTCTAAAACGTGCTGTGGCTATCCAGCATGAACGCCAAAAGGAGTACCAGGACAAAAACAATGAGTTGGAACACTTGAAGCAGCTGGTTTCTCAGTATCAGGATCAGTTGCGGACTCTAGAGGTAATAACTATGCCTTANCGATGCATTTGAGGCAGGCACAGCAAAGCAATTCCATTCCCTGGGCGTTTCCACCCAGATATTTTTCTAGAAAGTAAAGATGCAAACAAAGTTAAACATGAAAGCATAAGCGATGGGATTGGTTTAGGTTTTATGGAATCCTAAAATTTACTTAACCAATAAGTGAATATACTGGGAAAAGGGGTTTTTTAATTCTGGTTTGGCCTTTTCCTTTTGGAACAATTTTCTGGAAATTGGTTCGGATTATAACAAAAAAATGGAGGGGGTTTCACAAATTTATAAAAAAAAAGAAAAAAAAAAAAAAACCTCAGAAAGTAATATTCTTAAAGGGGGCGCCCGGGGGGCCCCCCCCCCTTTTTTTCTCCCCCCGGGGCGGGGGGGGGGCCCGGAGGGGAATAGGGAGATCCCCCAATTTTTTCCCTCCCTCTAATAAGAGAGGGGTGGTATATATAAATATAATATTTTCTTAGGGGGGCGGCCGGCGCTCTGTTTT



gi|109866056|gb|DW495032.1|DW495032 GH_RMIRS_105_E04_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTTGTTTGGTTGCTGAGAACA
||||||||.||| ||||| |
AAACAAACTAACAACTCTATT

EST sequence (targeted fragment marked with yellow):
AAAAAAAAACCTCTTCTCAGCTTTCGTCTCTATCGTTCTTTGCTTATCTCAACAATCAAACAAAAATCAACTCCAAAAGAGAAAAAAAAATCAAATCAAATCGCTTGATCTTTTCGTGTTCAAGTTTCTAGTCATGGCGGATCGCGCGTCCTACAGTTTGGCTCCTCGATTAGATATTGAACAGATTTTACTAGAAGCGCAACATAGATGGTTAAGACCTGCTGAAATTTGTGAAATTCTTTGTAATTATCAGAAGTTCCATATTACGTCAGGGCCTCCTACTAGACCTCCAAGTGGTTCACTCTTTCTTTTTGATCGAAAGGTGTTAAGATACTTTAGGAAGGATGGACATAATTGGAGGAAGAAAAAAGATGGAAAGACTGTGAAGGAAGCTCATGAGAAGCTGAAGGTTGGAAGCGTTGATAAGTTGCATTGCTACTATGCCCATGGAGAAGAGAATGAGAACTTTCAGAGGCGCAGCTATTGGATGCTTGAACCGGATTTGATGCACATAGTTTTTGTGCACTACTTGGAAGTTAAGGGTAGTAGAACAATTGGAGGCATAAGAGAGAATAGTGATTTATCAAACTCCCAAACTAGCAGTCTTTTGACTTCTAGCAATTCTGTTACTCATGCAAAAGAACCTTCTGCCCATGCGAATTCAGCATGTTCAATAACGAGTTTAACTTCCTTATATGAAGACGCTGATTCTGAGGATAGTTGCCAAGCAAGTTCTAGAGTCTGTACATCGCCCCCTTGTCTCGTCCTCTGCCTGATGTA



gi|73860488|gb|DT463227.1|DT463227 GH_CHX13E03.r GH_CHX Gossypium hirsutum cDNA clone GH_CHX13E03 3', mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|||||||||||||. |||| |
AAACAAACCAACGGATCTTTT

EST sequence (targeted fragment marked with yellow):
GCGGCCGCGTCGACCTCTCTTCTCTTTATCTTATATCATCTCTTTGTCTCTCTAGAACAACTTTCTTGAGAATATTTTTTCCTTCTTTTTCTAGGCAACCAAACAAATAAGAATGGGTGATATGCTGAGTGAAGAACAGATTGTTGAGTTCAAAGAAGCTTTTTGTCTGTTTGACAAAGATGGAGATGGTTGCATTACTGTGGAAGAACTGGCAACTGTGATTAGATCCTTAGATCAAAATCCCACTGAAGAAGAGCTTCAAGATATGATAACTGAAGTTGATGCTGATGGCAATGGAACCATTGAATTTGCAGAGTTCTTGAACTTGATGGCCAAGAAAATGAAGGAAACTGATGCAGAGGAGGAACTTAAAGAGGCTTTCAAGGTTTTTGACAAGGATCAAAATGGGTATATATCAGCTAATGAGCTGAGGCATGTGATGATCAATCTTGGTGAGAAATTAACGGATGAGGAAGTTGAGCAGATGATCAAAGAAGCTGATTTGGACGGTGATGGTCAGGTCAACTATGATGAATTTGTCAAAATGATGACAACCATTGGATGATGATTAAAAAAACAACTATTAGGGCTTCATCAGCCATTTGATTCATCAACTTATTATAGTTTATTAATTTTAATTTTAATTTTAATTTGTATTCAAAATTCGTTTTGTTTCTGTCTACCAAAGAAGTAATTGCTCTAAAAAAAAAGTCGACGGGGCCGC



gi|164305490|gb|ES797750.1|ES797750 UFL_521_84 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
||||||..|||||| |||||
AAACAAGTCAACGAAACTTGT

EST sequence (targeted fragment marked with yellow):
GGCACGAGCTTTGATAAGAAAATGGTTTTGCAGGTGTTCAAGCAATTGATACATCTGCATCAATGGTTTTATTTAAAACACTTTTTACACTGTTGGTTCAGGAGATCAAATGCGGGAATCAGAGCCTGAGGATATCAACAAATTACTTTTCTCAGCCATTGTTCAAAGCAACTGAACAAACTTTGATCTCCAAGGATAATGATGAGTTGGTGTTGAAAGATTGGCACATATATTGTAAGAGACATATGTCAGTTTGTTATGTTTGTAATATGTATGCGTCTTATTCTTTTAAATTAAATAATTAAAGAAATCTTAAAAGAAATAAATGATTAAGTTGGTGATTTAAAAAAAAAAAAAAAAAA



gi|78337282|gb|DT557556.1|DT557556 EST1068196 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|..|||||||||||||||| |
AGGCAAACCAACGACTCTTTT

EST sequence (targeted fragment marked with yellow):
AAGAGATATAATTGAAAGAAAAGAAAAATGGTTCTGCTAGAGAAACTTTGGGATGATGTAGTGGCCGGTCCTCAACCGGAACGTGGCCTTGGCCGGCTGAGGAAGATCACCACCACCCCACCCTTGTCCACCAAAGATGAGGCTTCATCAATGGCGATGCCGACGAGTCCGACGACACCTGGGACACCATCGACGCCGGTGTCGGCTCGTAGGGACAACGTGTGGAGGAGCGTGTTCAATCCAGGTAGCAACCTTGCAACCAAAGGTATTGGCGCTGAAGTTTTCGACAAGCCTCAACCTAACTCTCCTACTGTTTATGACTGGTTCGTACAGATTTTTTTTCTTGTTCAGTTATTTGCATGCATGCTAGCTTGGATAATTGGATATATATAAGTGGGACTTTGATTTTGCTTTTTGGATGTTTGTGATCCCCATCTGTTTGGTTGCTGAGAAAATTAATCATAGAAGAGTCATATATATATATTAACCAGGTGTTTTGGAATTTGGATTCTTTTTAATATATAGTACTAAAATGAAGAGTTTTTCAAAAAGGAAGCCTCAAAAACTTTCCTGTTTGTTTTTTTTTTCCCTAACGTTTTCTCAGCAACCAAACGGAGGCTCAGAGACAGATCATGCCGGAAAACTTGGCTCTTTGTTTGGTAGCTGCGTGGAAATAACAGTATGCTGTAATTATTACATTAATCCATTTATAAGCTTTTCTTTTTAATTATTCTTGTCAATTTACTATAAGATGATAAATAACCAAAGATTAATAATTAGTGTAATTTGCATGGATCTAATTTCTGGGTGTTAACTAAAATTTAAGAAGAAAGTCTGGTCCGGATGGGGATGGGATGCAGGCTTTACA



gi|164246091|gb|ES813384.1|ES813384 UFL_222_70 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
. ||||||||||||||||| |
GTACAAACCAACGACTCTT-T

EST sequence (targeted fragment marked with yellow):
GGCACGAGAGCTGGTGTTTGTTTCCTGAGAAAGCTAAAAAAAATGCAGGAATCTTTTGTTCTTAGTTAAGCGTTAAAAGCTGAAAGTTTAAATTCCAGTTCTTTCTCAGCAACCAAACATGTTACAACCCTACAAAGCTTCTTTAATGTTGTGAAGTATTGAGGGTGTTTATTATTTGTTGTTTTTTTATAATTACTGATGTCTCCGCCGCTGCTTGGCGTGGAGGAGGAAGGGATTCAGAGCAATGTTACTTTACTCGGTTCTTCAGGCTCAATGGAAAGTGTGTGCCAGAATAGTGCTGACTTGAAGGAACGGAACTACATGGGCTTGTCTGATTGTTCTTCAGTGGATAGCTCTGTTTTTTCCCCTCCGTCCGAGGAAAGAAAGGCTAGTTTGAATCTAAAGGCGACTGAGCTTAGGCTCGGACTTCCTGGATTGCAGTCGCCTGAAAGAAATCCAGAGCTTTGCTTGTTAAGTTCTTCTCAGCTTGATGAGAAGCCGTTTTTCCCTTTGCATCCTTCAAGTGATGGTCACTGCTTTGCATCACAGAAGAGTGTTGTTTCAGGGAATAAAAGAGGGTTCTCTGATGCAATGGATGGGTTCTCAGAGGGCAAGTTTCTTTCTGATTCAAAAGTTGATGTTATGCTGTCACCTAGGCCTTCTTCAAACTTCGGGGCTCAACCAATGAAAGCTAAAGAAATCACGAGCCAAAACGTGGTGCATGACAGGCCTCATGCTGCTGACAAGACCAGGCCTAATCCCAATGCATCTGCAAACAATAACAGTGGAGCACCTGCTAACAAGGCACAGGTTGTAGGGTGGGCACCTATCAGATCATTTANGAAGAACTCATTGGCCTCGGCGTCGAAGACACTGATGAAGTCGATGGGGAGGCAGGGCCTGGTGCTTTGTTTGTGAAGGTTAGCATGGATGGTGCTCGGTATTTGAGGAAAGTAAACTTGAAAACTACACTAAATATCAGGAGCTGTCTTCCGCACTTGAGAAAATGGTCAGCTGTTTTACATAGGGCAAGATGGATTCCTGGAACCTTCGGGAGGGGGCTGCGAAACAAAAACAAACCCAAGGATTTCTTTCTGGGAACAAAAAAAGTTTTTTATTTTAAAGGAAAA



gi|164316467|gb|ES848886.1|ES848886 UFL_652_05 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
.||||||||||||.. ||| |
GAACAAACCAACGGTACTTTT

EST sequence (targeted fragment marked with yellow):
CCGGTACTTCCCTCAAGCTGCCATTTTCTTGTTGGATAACAAAAAGCTTGAAGCTTTGCCCATGGGGAAAGACCAAAGCCCTGTGATGCAGCTTTACATAAGGGATGCATCCAAGAATTGGAAACTGGCTGGACCGGATGGAGGCAGCCGATTTGTAATTAAGGAGCCAGCGGCTAATGCTGTTTTATCGGATTACATTTCATCTGAGAAATGGCAGGATGTTGTAGATTTCGATGACCACCTTGACGACATTAAGAAGGACTGGCTTAACCCGGAACTCTTCAAATAAGATCCTTTGATTGGTAGCTTGAAGCAGACAATGAATTCGACAAACCAATGGAGATTTTGTTGTGATTATCGGTTATAAAGCTTGAGAAGATGCGGTCGATGTTTCTTAAGCAAAACACGAGCATTTTAAGACAATTGTTTTAGAACTTGTTAGTGGAATGCAAAGCCATTCTATGTTTTTAATTTACTGCAAGTCTTTTCGAATCTAGCGATTGAGGATAATAATGTATGATGAAATCATTGACCCTTTCATTTTAGGAAGGCTTAAAGTGTCAATTTCAAGCAGCCATGGATGGGCCTTTTCATGGCAACCAAACAAGGGTTCTTCAAAAAAAAAAAAAAAAAAAAAAAA



gi|78322897|gb|DT543171.1|DT543171 EST1053811 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
ATCCCATCGGTTTCTCATCAACCAAACAGAAAATTTCAGTCTACAATTCGAATTTTCGTTTTCTAAGTTAAAATAGAAGGGGAGTGAGGGATTGAGACTGATAGCGATAAGGAGATACTGTTTTTTTATTTGATTTAGCGAAGGATGTCTGCGGCAGTGTGCGGGAGCAAGAGATCGTTCTTCGAAGATATCCCGTCACCGCCATCGGCTTCTTCCTCTAAGAAGCTCCGGCGCTGCTCGCCGTCGTCTCCTTCTTCTGTTCGTTTCTCTCCGTCGCCATCTGCTCTCAATCACCTCCAATCTATCTTCCCTCACATGGACCCCCAGCTTCTGGAGCAAGCGCTATTAGAATGTGGCAATGATATAGACACTGCCATCAAGAAGCTGGAGGATCTTTGCTTAGGAGCAGCAGAGGCTAGAGGGGGAAAGACTTGTACCGTTGAGGAACTGGGCACAACTGCTGAGCAGGGTATATTGACTAATAATGGAGAAGCTGTTGCTGCTGCTGTGACTATTCAGAATCCATCAGCCTCTGAAAATATGCCTGCTGATGGTGCTGAATGGGTGGACTTGTTTGTGAGGGAGATGATGAGTGCCACAAGTGTGGATGATGCCAAATCCCATGTCTCTAAATTGCTTGCAGTTTTGGAGAATTCCATAAGTAAACGTGCTGCAGAAGAGACGGCACAAAATTTTCAAAAGGAAAATCTCGTGTTAAAGGGACAAATCGAAGCGATGATTCAAGAAAATACAGTCCTCAAACGTGCAGTGGCAATCCAACATGAACGACAAAAGGAGTATCAAGATAAAAACCAAGAGTTAGAACATTTAAAGCAATTGGTGTCTCAATACCAGGAACAGATGCGAACTTTAGAGGTAAATAACTATGCATTGATGATGCATTTGAGACAGGCACAAGAAAGCAACTCGATCCCGGG



gi|164258874|gb|ES849673.1|ES849673 UFL_689_42 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|||||||||||||. ||| |
AAACAAACCAACGGACCTTTT

EST sequence (targeted fragment marked with yellow):
GGCACGAGATTTTCCAGGCAACCAAACAAACAAAACCATGGGGTGATATACTAACTCAAGAACAGATTGTTGAGTTCAAAGAAGCCTTCAATTTCTTTGACAAAGATGGAGATGGTTGCATTACAGTGGAAGAATTGGCAACAGTGATAAAATCCCTTGATCAGAATCCCTCTGAAGAAGAGCTTCAAGATATGATTAATGAAGTTGATGCTGATGGTAATGGAACTATTGAATTCTCTGAGTTCCTGAACTTAATGGCCAAGAAAATGCAGGAAACTGATGCAGAAGAGGAGCTTAAAGAGGCTTTCCGGGTTTTTGACAAAGATCTAAATGGCTATATTTCAGCTTCTGAGCTGAGAAATGTGATGATGAACTTGGGTGAGAAATTAAGTGATGAAGAGGTTGAGCAGATGATCAAAGAAGCCGATTTGGACGGTGATGGTCAAGTCAACTATGATGAATTTGTCAAAATGATGACGACCGTTGGATGAACATACTTTTTCTTCATCATCAACACATATGTATAATATTATTACTAATTTTGTATTCAAATTTTATTTTCTTTCAAGCTTGTATTCTCCAATAAGTCCTTTTTAGTTTATTTGTTGTACTCTTTTTTTTTCTTTTTCTTTGTTCTCGGTGTATCCATTGATGTCAAATGACGTCCAAAAGTTAATTAGATGAATGACTTTCACAAAAAAAAAAAAAAAAAAAAAAAAAA



gi|109882560|gb|DW511530.1|DW511530 GH_TMIRS_154_C06_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTTGTTTGGTTGCTGAGAACA
|.||.|||||||||||||| |
AGACGAACCAACGACTCTT-T

EST sequence (targeted fragment marked with yellow):
TCTTCTTTTGCTTGAGTTGTCCTGTCCTTAAATTTCTCAGCAACCAAGCAGAAAGTTGAGGTTTTGAGCTGAAATTGACCGTTAAGAGTTGCTTTTCGGGTTTTATAGGGAGTTACATGGCGATTTCAAGACCCATGTTACTTGTTTTCCTATTGCTTATACTCATAATGACCTCCCAGTTTGAGTGGAGACATCAAATTGTCGACTTTGACATGACCCCTATTGTTACTCGGAAGCAGCAACAAATTTCCAGAAGGGAAGAAGCTGTGAAGGAAAAGATCATCTTATCACAAGAGAAGAACATTCAGAGACTTCGGGAACTTGTGCGGAGCCTTCAGCAGCAACTTTTGCAGTGCAAGGGCAATAACAAGACAAATGACACTATAAGCCATTTAACTGAACATGTTCTTGAGCTCGAGAGGCAGCAAATCTTGGAGGACTAGACTATGATATCTCAAAACATATGTTGCGATTGCGGTGTGTTGGTGTTTGTAAAATGCTTGTTTACCCATGCAAGTGCAAGTTTGAAGTTGTAAGTTATATGGCTTCTTTCAACCCCTCTTATCCTATCCACCTCTTTTAAAATGAAGCATTGAAGCTTTGAACG



gi|24976682|gb|AJ513200.1|AJ513200 AJ513200 Gossypium hirsutum ovule first day the flower opens Gossypium hirsutum cDNA clone su

TTTGTTTGGTTGCTGAGAACA
|||||||.||| |..|||| |
AAACAAATCAAAGGTTCTTTT

EST sequence (targeted fragment marked with yellow):
TTAGAGTCCACTGGGCCTAAGCGGCGACATGTATTTTTTTTTTTATTTTTTTTTTTTTTTCTTAAATTGTAATATAAGCTTTTATTAATACTAAAAAAACTGAAGGTAATTTCATATCAGGAAAAAAATAATAAAGAAAAGTAAACTCATTTTCTTGGAAACTAAACAAAATTCTAACAATGTCCAAAAATATTATCAATCCAAAATAAACACCAAGACATCATTTTTCTAAATCATGTAAAAGTAAAAAAAGATCAAGAACCCCAATCACCTTACTCTTCATCTTCTTCATCTCCATCTCCACCAGCAGCCTTCTTGGCAGCTGCCCTTTGGTTCTTTCTCTTCACTCTTCCGGGACGTCCACCGCCAAACGGACTAGTCAGCGAGAAATCAATGTGCTTTTGTGAATCAACCCTCACCATGAATGATGGAATGTTGACTACCTGCCTTCCAACCAGTTGCGGTAAAAGGAGACGTGAACCATTGTTGTAGGGCGGAGGCGCCGTTTCTCTTTAACACAGTGACTTTGCTGCTTTCATCCCCCGGCCATAATGGCCGAATTCCCGGGTACCAACACAATGGCGCGCTTCCCGAGAAAAAAACAAAAGCTCGCCAGATCTCGAGTTGGCGTATCATGGTCTAGCTGTTCCTGGTGAATTGTGTCCGTCACATTGCAGATACTTTCCTCTTGGGCCCGTATCCTCAAATTGCCATGAATTTCACGGGAAACGGTAATCCTCCGGGGACGGCCCTAACCTCCGAATCTCGGTTTCCACCCTCTTTAGTAACACGGTCTTTGTCCACAGGGCTCG



gi|78353744|gb|DT574018.1|DT574018 EST1084658 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|..|||||||||||||||| |
AGGCAAACCAACGACTCTTTT

EST sequence (targeted fragment marked with yellow):
CTTTGGGATGATGTAGTGGCCGGTCCTCAACCGGAACGTGGCCTTGGCCGGCTGAGGAAGATCACCACCACCCCACCCTTGTCCACCAAAGATGAGGCTTCATCAATGGCGATGCCGACGAGTCCGACGACACCTGGGACACCATCGACGCCGGTGTCGGCTCGTAGGGACAACGTGTGGAGGAGCGTGTTCAATCCAGGTAGCAACCTTGCAACCAAAGGTATTGGCGCTGAAGTTTTCGACAAGCCTCAACCTAACTCTCCTACTGTTTATGACTGGTTCGTACAGATTTTTTTTCTTGTTCAGTTATTTGCATGCATGCTAGCTTGGATAATTGGATATATATAAGTGGGACTTTGATTTTGCTTTTTGGATGTTTGTGATCCCCATCTGTTTGGTTGCTGAGAAAATTAATCATAGAAGAGTCATATATATATATTAACCAGGTGTTTTGGAATTTGGATTCTTTTTAATATATAGTACTAAAATGAAGAGTTTTTCAAAAAGGAAGCCTCAAAAACTTTCCTGTTTGTTTTTTTTTTTCCCTAACGTTTTCTCAGCAACCAAACGGAGGCTCAGAGACAGATCATGCCGGAAAACTTGGCTCTTTGTTTGGTAGCTGCGTGGAAATAACAGTATGCTGTAATTATTACATTAATCCATTTATAAGCTTTTCTTTTTAATTATTCTTGTCAATTTACTATAAGATGATAAATAACCAAAGATAATAATTAGTGTAATTTGCATGGATCTAATTTCTGGGTGTTAACTAAAATTTAAGAAGAAAGTTTGGTCCGGATGGGATGGGATGCAGGCTTTACAGCGGGGAGACCCGGAGCAAGCATCACGTTGATAGCGGTGCTGACGGCGGCGGATGGTAGCAAACACTA



gi|109890588|gb|DW519552.1|DW519552 GH_TMIRS_232_A07_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTTGTTTGGTTGCTGAGAACA
||||||||.|| ||| ||| |
AAACAAACTAAAGACCCTTTT

EST sequence (targeted fragment marked with yellow):
AGATCTCAATTCCTGTTATTTTCTCCCATTTTCCCAGAAATCAAACAAAAGGAAATTTTGTGTAAAATCGACATCTGGAATATGGGTTTCTTGGTAACAACCCTGATTTTTGCTGTAATTGGGATAATTGCATCGCTTTGTACCAGAATCTGCTGTAACAGAGGTCCCTCTGCTAATCTGCTCCACCTAACACTGGTCATTACAGCAACGGTCTGTTGTTGGATGATGTGGGCAATTGTATATCTTGCACAAATGAAACCACTCATTGTCCCCATTTTGAGTGAAGGAGAGTGAAATTCTTCGCACGAGATCATTTGCGAGGTTATCGGTAAACAAGCTGTAGTCATATTTGATTGTGGATTAGCCTCTGAATTTAGTTGTCATGTAATATGTCTTTCTCATGTCGTTTCTGTAATTAAATCCTTATTCAAAGCTTGAACTTTGAATTGGTATTATGTTAGCAGTACTTCATTATTTGTTTCTCATTTGTTCAGTTTTTCATAAAAAATAGTGTTGTTTCCATTAGACATTATGCAGTTTTTGATGAAATAATATCGAAAAAA



gi|164341149|gb|ES840188.1|ES840188 UFL_062_38 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
||| ||||||||| .|||| |
AAAAAAACCAACGTTTCTTTT

EST sequence (targeted fragment marked with yellow):
GTCTCGAGTTTTTTTTTTTTTTTTTATAATAGCAAAGATGCGGACTGGAATGATGTGATTAAAGAGGCCTCTTTAAATGGTAGACATGAACCACAAATACCAAACTGCCGAAGGATTAGAATGTTTTTTCAAGCTACAATCTTATTCGTCACTTGTTTTTTATTGGAATAAAATGGTGAAATTCTCCATTTACACCACATACAAACAGTAATGATATCAAAAGATGAACCCATCAAGTCAGTTAACCCCATGCAAGCATGTTCAAGTATTGTGGATTCTATAAGAAAATATGGTTCCTCTAGCTCCCTCGGTATGTCGAGAAGGAGAATGGTGAAAGCAGCAAAGGAACGTGAAAATGCTCGAATTTCTGTGTGTCTTTGATTTCAAACACAATTGAGACATAGGGGAAAAAGCCTCCAGGGTTGTACTTACCTGTGTTGAAACTTATTCGGTATACTCCAGGGCTGAGAGCATCTACTATGCTCATCAACTGACCGCTCCGTCCATCTCTATCAGTAGTTGAACATCCTTCAAGTACCCATCCGCCTATATCAGTTTCACAAAATGATGGACGAGGTTGACTGCTCTTCCACATTTCCAAACGTACTTCATTACAGCAGCTGGAGATCCCTAGAAACATCTATACATGAGTAGTGATTGGGGGTCGAGGTCCAGCTTGGACCTGAAGAACTTTTTGCAGGAAAACCTTCTAAGGAACAGTTAAATCCTCGGCCAAATTCCGCCGAAGGCCAGTTAAAATGGACCCTCTCCCTTCTACTCAACAACTCTTTCTAAATTTTGAATTTGAAAACTTTGTTTTAATTTCAATCCTCCTTTTCCCTTTCAACAAAAACTACCCCTTACTTTTCAATTTATCCCTCCAAAAACCCAAACCTTTTCTCCCCATTTTAATAGAATTAAGGAACTCCAAAGCCTCTTCCAACTTGGTGGTCCTACCCCCAAACTTCATCTGAATTGGTTAATTCCCCTTTTAACCAAAAATGGCGGGGGAAGTCCTTTTTTTGGGGGGGACTGGAAAAACAAAAAAAAGGCTTGCTTTCCAAAGGAAAAAGGGAAATTCGGAAATTTTGGTTTTCCAACACCTCTGGAAAATTTTTCCAAAAGGAAAAAGAAGTTAAAAAAGGGGGGGGGGGTTTTTTCTAAAAATGTGTGTTGGGGAGTATTTCAATTTGAAGAAAAAATTCTGTGGGAAGGGGGAGATGGTGGAGGGGGAAGTCTTTTTTTTTTTTACAAATATTATTAAGTAAAAAAGAAGGGGGGTCGGTATAACAAAAAAAACACCCCCCCCACAAGGGGGGGAAAGTTTTTTTTTTTTCTTTGCAACCAAAAAAAAAAAAGGGGGGGGTGGTGTTTTTTT



gi|109847668|gb|DW476648.1|DW476648 GH_RMIRS_004_B10_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTTGTTTGGTTGCTGAGAACA
||||||||||| ||.|||| |
AAACAAACCAAAGATTCTTTT

EST sequence (targeted fragment marked with yellow):
TGTTTATCAACTGTGTATTGAAACCCACCTATATGATCCGAAACTGAGATTTTTTGTGTTGAAATATCATAGGAAGATGCCAAATCCAACTTGGGAATTTCCGTCAAGTCCAACATTTTCTCGGGAAAATGAAACGAAGAGGTGGTGAAGAAAATCTTCCAAACACGAATAAAATATTTTCTTAGAAACCAAACAAATCTCATGATTTATACACAAAAGAACAAAGACTGATGCTTTTTTAAACTCCAAATCTTGTATTTGGGTATAAAGGTTGAAGCTTCAACTGATATATGTTGCAGAGAGATTTAAAATAAAAAACACATAGAAATCAATGAAGGAAAGTTGAAATT



gi|73943942|gb|DT527250.1|DT527250 GH_OCF06E06.f GH_OCF Gossypium hirsutum cDNA clone GH_OCF06E06 5', mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|||| |||||||| .|||| |
AAACCAACCAACGTTTCTTTT

EST sequence (targeted fragment marked with yellow):
ACTGCATTTTCTTTGCAACCAACCAAAGGATAAGCTAAGAAACAAGAGTTCAGGAGGGAAGAATAGGGCACCTTAAAGATTGACTCTTTTAGAGATTTTTGATTTTGGGTCTTTTTCTTTTTTAAGCAAATGGCTAGTGGTGGTGGAAATAATAGGAATGGGACTCATAGGAACTCTCTCAAAGGAACGACAACAACATCAACAGTATCAACAGATAAGCCACTCTCTGTGAATTCCAACCCTTCAAAGCCTGCATTCAAAAACAAGTCTTCGCCTTTGACCGGTGCTTCTTCCGGGTTAAGGAAGAGTAGCCCCGGATCACTTGGAGGTGGAGCTGCCAAAGATGATGCTGGAGTTCCTGGAAGAGTTCGAGTGGCTGTAAGGTTACGTCCACGTAATGCAGAAGAGTCAGTAGCAGATGCTGATTTTGCTGATTGTGTAGAACTTCAACCAGAGCTTAAAAGGTTAAAGCTTCGCANAAACAATTGGGACACAGATACCTATGAGTTTGAT



gi|78330844|gb|DT551118.1|DT551118 EST1061758 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
ATCGGTTTCTCATCAACCAAACAGAAAATTTCAGTCTACAATTCGAATTTTCGTTTTCTAAGTTAAAATAGAAGGGGAGTGAGGGATTGAGACTGATAGCGATAAGGAGATACTGTTTTTTTATTTGATTTAGCGAAGGATGTCTGCGGCAGTGTGCGGGAGCAAGAGATCGTTCTTCGAAGATATCCCGTCACCGCCATCGGCTTCTTCCTCTAAGAAGCTCCGGCGCTGCTCGCCGTCGTCTCCTTCTTCTGTTCGTTTCTCTCCGTCGCCATCTGCTCTCAATCACCTCCAATCTATCTTCCCTCACATGGACCCCCAGCTTCTGGAGCAAGCGCTATTAGAATGTGGCAATGATATAGACACTGCCATCAAGAAGCTGGAGGATCTTTGCTTAGGAGCAGCAGAGGCTAGAGGGGGAAAGACTTGTACCGTTGAGGAACTGGGCACAACTGCTGAGCAGGGTATATTGACTAATAATGGAGAAGCTGTTGCTGCTGCTGTGACTATTCAGAATCCATCAGCCTCTGAAAATATGCCTGCTGATGGTGCTGAATGGGTGGACTTGTTTGTGAGGGAGATGATGAGTGCCACAAGTGTGGATGATGCCAAATCCCATGTCTCTAAATTGCTTGCAGTTTTGGAGAATTCCATAAGTAAACGTGCTGCAGAAGAGACGGCACAAAATTTTCAAAAGGAAAATCTCGTGTTAAAGGGACAAATCGAAGCGATGATTCAAGAAAATACAGTCCTCAAACGTGCAGTGGCAATCCAACATGAACGACAAA



gi|73864261|gb|DT467000.1|DT467000 GH_CHX19L21.f GH_CHX Gossypium hirsutum cDNA clone GH_CHX19L21 5', mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|||||||| ||.||| ||| |
AAACAAACAAATGACCCTTTT

EST sequence (targeted fragment marked with yellow):
GCGGCCGCGTCGACAAAATCCAAAGGCCGGCCTTTTTCTCGTTTAGTTTCCTTTTCATTTTCCCAGTAAACAAACAAAACACATTAACATCGTTTCGAAGCCAAAACAAGACTGAATTCATGGTGAAAGGAAGGCAAAACTTGCCGGCTGACGTCATCCAAGTAATCGATCAGCTAGAGCGCCATTGCTTATCTCCCGATGGATCTCTTATCTCCAAATCCGCCTACTACGATCTCCAGCTCGCGAGAGAGGAAATGTCGAGAGAAAGATTACGCTACTTAGAAGCAATGGCAATTTACTGTGAAGCAATGGCTATGGTGGAAGAGTATCAGCAAGCAGTTTCCGTGGCGAATCTTGGAGGGATTCGAGATATTCAAGGTTTTTATCCGCAGCTTGGATTGAAGAATTCTCCTCAGGTTTATGAGACTCTAGAGCATCGATTAGTTGTTGCAGAAGCGGCTCAAAGATTGAGACTTCCACTAATATCTAAAGATGGGGAAATTCATGAGGAAGAAATTGAGAAATGGAGTATTATTTCACGGAGTTCACTTGATAGTACTAGTACCAGTCTCACTATCAGCTCGAGTTCAAACTCATTGAATTATGCAAATAGTGCGGCAACCAGTGGTACAGCTGCAAATAATACTGGTGATTCAGGAGAACCTGGTGTTGGTGGTGTGCCTAATCGTTTTCTTGGAATCACACCTGCTTATTTGTGGCAAACTCAGCTTCAACGAGTACCATTGTCAATGGATATGGCTGACTATCAGNTAACTCTTTTCAGGGAGATTGATGCT



gi|109869938|gb|DW498914.1|DW498914 GH_TMIRS_030_H02_R Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTTGTTTGGTTGCTGAGAACA
|||||.|||||. |||. |||
AAACAGACCAATTACTTCTGT

EST sequence (targeted fragment marked with yellow):
AACGAAAGCCCACCAGCATTGTCTTCATTAACCAGACAAAATTTTGTACTTCAAAGCTACAAATTTTGCTAAGAGCATCCATAGTAATTGTTCTTTAACTAAGGATAAGAAGGCTACGAGGAACAATATAATAAGAAACAAACATTGTTCTGCTGTCAAACGACTCAATTGTCACCAGGTAGAGACTTGATGATGTCAGAATCACCTGGATCAACTATACTCAAGCAGGATACGCGGAAGTACTTCCCACAAGCAGTTCCCAGATCATTATTGTTTCCATTATAATGATGCACCCCAACTTTACAAAGCATGGCATAGTACTCAATCTCAGATTTCCTCAGAGGTGGACAATTGTTGGAAATAATAATCAGTTTCCCTTTGGAGGACCTTAGAGACTTAAGCACTGTTTTATAACCAAGAGTGTATTTTCCACTCTTCATGACGAGAGCCAACCTGTTGTTGATGCTTTCATGGGTCTTCTTCGTCTTCTTGCCGGCCGCCATTTTTGTTGTTATGTTTCAGTTGGTGTTTCTGGATTCGGAGTTCGGCTGCTGAGGGTTTCTTCTGAGAAATCTAAAACTT



gi|164313023|gb|ES814721.1|ES814721 UFL_187_95 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
GGCACGAGGTCTAAGCCAAGCCTAAGTCCGAATTTGAATCCCATCAGTTTCTCATCAACCAAACAGAAAATTTCAGTCCAAAATTCGAATTTTCGGTTTCTAAATTAAAATAGCAAGGGAGTGAGGGATGGAGACTGATAGCGACAACGAGATACTGTTTTTTGTTTGATTTAGCAAAGGATGTCAGCGGCAGTGTGTGGGAGCAAGAGATCGTTCTTACTCACCGTTTAGTTCACCTTGTTTTATTTATTTTTTCCAGTTTTTATTTTGTCCTCTACCCTTCACTTTCTCGGCAACCAACCACTCGAATTCGAACCCAGGAAATGTCGTCTTTCGATTACCCTATACTCTCACGTAGTGACATAATTTCAATTCTGGCGGAGTCACAGATCGCCGCCGTCACTGACAACGATTTCAAGAATATCAAACCCGACTTCGTCTCTAATCTTTACACGCGCCTCCTTATCTACCTCGACGCTCTCAACGAGGAAGACCAAGGGCAAGTTGAGTTTTCAGCATTGGAGCAAATTGAGAACCCGGATCTTCTAATCGGGTCATTCCAGGTTATGAATTTGTATTGCAGGTTACGAGAGGTGATGGCTTCTCTTAATTGTCCGATGCAATTTAACCTTAGGGATTTGATCAAACCTGATCCGCGTCGGACCGAGCATTTCCTCAGCGGAATCCTCAATTTTTGTCTTTATAAAGAAACAAAAATGAATCTTCTAAGACCAATTGTAGAGGAACTGGCCCTTCTAGATGATCAACGGAAGGAGTGGGAGGCTAAGATTTCTCAGTTGAATGAGGAGATTGCAGGTTACAGTGAAGCAAGAGAAAGGGAGTTTCCACTAGTTCAAGAGATAGAATCAAAAGTTAAAGAATTGCGTGAGATGATTGCTGGCCTCAACAGTAACCAGATGTCACTGAGAACTTCTTTTCGGAATTGGAAGGAAAGACTGGGCAAATGGATGAGAAGATTTCTAAGGCTGAGTTTGAACTGGTTCAAAGTGTCAAGAAAAAGGCAATCTGCGATCAAAAATAATTCAATCCCCGAATAACTACAAAAAGCTTTAAAGGAAAAAAAAATTAACTCCGAGAATAAGGCAAAGGTAGGGTGAAAAGGTTGGGCTAATGCCATCTTTTTCCAGGAAAAAAACATGTCCCCCGTGTTGGAGGGCTTAACACCAAAGGGGCTTCAAAAAAAAAAATGGTGTAAAACACCTTTTTTCCCTTGTGGTGGGAAGCCATTTTTAAGTGAGAAAGGGGGGGGGAAAACCTTGCTGACAAAAAACAATTTGTTTAAAAAAAAAAAAAAAAGAAGGGAGGGGG



gi|109872906|gb|DW501881.1|DW501881 GH_TMIRS_061_A01_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTTGTTTGGTTGCTGAGAACA
||||||||||||||||||| |
AAACAAACCAACGACTCTT-T

EST sequence (targeted fragment marked with yellow):
ATCAGTTTCCCATCGAATTTCTCAGCAACCAAACAAAATCTTCCATTGTCTTCTAGAACTTTCCAAGCACACTAGAGTTAATCAATGGCTCGTACAAAGCAAACAGCCAGGAAATCAACCGGTGGAAAAGCTCCACGTAAGCAACTGGCGACGAAAGCCGCGAGGAAATCAGCTCCAGCCACCGGAGGAGTGAAGAAGCCTCACCGTTTCGGGCCAGGAACAGTGGCGTTGAGAGAAATCAGGAAGTACCAGAAGAGTACCGAGCTTTTGATCCGTAAACTTCCGTTCCAAAGGCTAGTAAGGGAAATCGCTCAAGATTTCAAGACGGATCTGAGATTCCAAAGTAGTGCGGTGGCGGCTTTACAAGAAGCTGCGGAAGCTTATCTGGTTGGCCTGTTTGAGGATACCAATCTCTGTGCTATTCATGCCAAGAGGGTTACTATTATGCCTAAAGATATTCAACTGGCTCGGAGGATTAGAGGAGAGAGAGCTTAAATAATGTATATGGTGATTTGCTTTGAATGATTTATGCTTTTAGGATCTGTGTTGTTATGTTTTCTCTAGATGTAGATCTCTCAGTTTAGTGGTTTGTGTTCAGTGATTGATGAAATGAAAGTTTGGAAAGATCTAATTAGTAGTA



gi|73852018|gb|DT461038.1|DT461038 GH_ON40E03.r GH_ON Gossypium hirsutum cDNA clone GH_ON40E03 3', mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|||||.|||||. |||. |||
AAACAGACCAATTACTTCTGT

EST sequence (targeted fragment marked with yellow):
CTTATAGAGAAGGATTCAACATTATAACGAAAGCCCACCAGCATTGTCTTCATTAACCAGACAAAATTTTGTACTTCAAAGCTACAAATTTTGCTAAGAGCATCCATAGTAATTGTTCTTTAACTAAGGATAAGAAGGCTACGAGGAACAATATAATAAGAAACAAACATTGTTCTGCTGTCAAACGACTCAATTGTCACCAGGTAGAGACTTGATGATGTCAGAATCACCTGGATCAACTATACTCAAGCAGGATACGCGGAAGTACTTCCCACAAGCAGTTCCCAGATCATTATTGTTTCCATTATAATGATGCACCCCAACTTTACAAAGCATGGCATAGTACTCAATCTCAGATTTCCTCAGAGGTGGACAATTGTTGGAAATAATAATCAGTTTCCCTTTGGAGGACCTTAGAGACTTAAGCACTGTTTTATAACCAAGAGTGTATTTTCCACTCTTCATGACGAGAGCCAACCTGTTGTTGATGCTTTCAAGGGTCTTCTTCGTCTTCTTGCCGGCCCGGACGCGTGAAAGG



gi|78354476|gb|DT574750.1|DT574750 EST1085390 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|..|||||||||||||||| |
AGGCAAACCAACGACTCTTTT

EST sequence (targeted fragment marked with yellow):
AAAGAAAAAATGGTTCTGCTAGACAAAATGTGGGACGATGTAGTAGCTGGGCCTCAACCTGAACGTGGTCTCGGCAGGCTTAGGAAGATCACCACCCAGCCTTTGTCCATCAAAGATGAAGGAGAAAAGAAAAAGTACCAGAGGTCGTTGTCGCTGCCGAATAGTCCAGTGTCAGGTCCGACACCCGTGACACCGACGACTCCGACGGCGCGTAAGGAGAACGTGTGGAGGAGTGTGTTCCATCCGGGTAGCAACCTAGCCACCAAAAGTATAGGTTCTGATGTTTTCGACAAGCCACAACCCAACTCTCCTACCGTCTATGACTGGTGCGTATACCTCGTACCATGCATGCATGGATTTTGTCTGGCTGCTACTTCTTTAGCCACTTGGTTTTTTGGTTTTTGGGCTTTGATCATTCACTAATCTATCTATTTGGTTGCTGAGGAAAATGAAATCTAATTAATCATGGCAAGGGTGATAGCAACGGTTAACCAGATAATCACTAAATATAAATATATAATGAAATCAAGATATTTTAGAACACAAGCCTCAAGGATTTTCCTATTTTTTTGTTTTTTTTTTCTAACGTTTTCTCAGCAACCAAACGGAGGCTCAGAGACAGAGCATGAAGGAAAACTTGGCTATTTGTTTGGTCGCTGCGTGGAAATAATTCCTTTTGATCAGTATACACTCTTATACGCATTTATGGTATAACACTAGTTGTTTCTTATTATTAACTTTAATTATTTTATAACAAACGAAAATTAGATGACTT



gi|84166159|gb|DR454807.1|DR454807 CM027F06 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
||||||||||||| .| | ||
AAACAAACCAACGTTTATAGT

EST sequence (targeted fragment marked with yellow):
CCTCTGTTTTTCTTATTCTCGGATTCTCTCTTCATCTCCCAATTCTCAAAACCCTAATTATATTTTTTTATTTCCCTTTTTGATTCAGCAATCGGGGCTTGCCAATGGCCAACAGTAATCTCCCTCGAAGAATCATCAAGGAAACTCAACGTCTCCTCAGTGAACCTGCTCCGGGAATTAGTGCTTCACCATCAGAGGATAATATGCGATATTTCAATGTGATGATCCTTGGTCCCACACAGTCTCCATATGAAGGAGGGGTTTTCAAGTTGGAACTATTTTTGCCTGAAGAATATCCCATGGCTGCTCCCAATGTTCGATTTCTTACAAAGATATATCATCCTAACATTGATAAGCTTGGGAGAATATGCCTCGATATTCTCAAGGACAAATGGAGTCCAGCTCTGCAGATCCGAACTGTACTTTTAAGCATCCAGGCACTCTTGAGTGCTCCAAATCCAGATGATCCACTCTCGGAGAATATTGCTAAGCACTGGAAATCAAACAAGGCTGAAGCTGTTGAGACAGCAAAGGAATGGACGCGTTTATATGCAAGCGGTGCATGAAGACCGGTGGAACCGTTTGCTCTCATAAAATAACATTTTTATGCCAATGTAAGCTATTCAATGTCAATTCCATATTGAAATCTGGACGACTGACCGTTTGAACGAGTTTGATATTTGCAACCAAACAAAAGCTCCAGGTGC



gi|78350060|gb|DT570334.1|DT570334 EST1080974 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
ATTTGAATCCCATCGGTTTCTCATCAACCAAACAGAAAATTTCAGTCTACAATTCGAATTTTCGTTTTCTAAGTTAAAATAGAAGGGGAGTGAGGGATTGAGACTGATAGCGATAAGGAGATACTGTTTTTTTATTTGATTTAGCGAAGGATGTCTGCGGCAGTGTGCGGGAGCAAGAGATCGTTCTTCGAAGATATCCCGTCACCGCCATCGGCTTCTTCCTCTAAGAAGCTCCGGCGCTGCTCGCCGTCGTCTCCTTCTTCTGTTCGTTTCTCTCCGTCGCCATCTGCTCTCAATCACCTCCAATCTATCTTCCCTCACATGGACCCCCAGCTTCTGGAGCAAGCGCTATTAGAATGTGGCAATGATATAGACACTGCCATCAAGAAGCTGGAGGATCTTTGCTTAGGAGCAGCAGAGGCTAGAGGGGGAAAGACTTGTACCGTTGAGGAACTGGGCACAACTGCTGAGCAGGGTATATTGACTAATAATGGAGAAGCTGTTGCTGCTGCTGTGACTATTCAGAATCCATCAGCCTCTGAAAATATGCCTGCTGATGGTGCTGAATGGGTGGACTTGTTTGTGAGGGAGATGATGAGTGCCACAAGTGTGGATGATGCCAAATCCCATGTCTCTAAATTGCTTGCAGTTTTGGAGAATTCCATAAGTAAACGTGCTGCAGAAGAGACGGCACAAAATTTTCAAAAGGAAAATCTCGTGTTAAAGGGACAAATCGAAGCGATGA



gi|54122942|gb|CO498451.1|CO498451 G.h.fbr-sw07841 G.h.fbr-sw Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|||.|||||||| .||.| ||
AAATAAACCAACCGCTTTAGT

EST sequence (targeted fragment marked with yellow):
GCTTCGAGCGGCCGCCCGGGCAGGTACCCCATCAACTCAGCCCAAGCACTGATCTTTTGTAAATTGCGGGAATGTTTGGTGTCGATTAATCCTGATTTCGCCAACCAAATAAACTGTTCGACGAAATAGTATAAACCTCGCCGCCGTAGGCGATAACCGAGAGGAGAATCTCTTCCTTGGAATCAAAATGGGAGTTCCTCAAAGCGTTGACGTCCTGAACGAATTTCCCGAGCCGAAATGCTTTCCGACTCAGCCCGACGCTCGACTCGAAACTCTTGAGTTGGCGAGTTAGTGGGACCGTTTCCTGGAGAACCGAGGAGGCTAATATGATATTGGTAGCGTAACGAGAAATCTTGAGGAGCTTGTCGACGCCGTCTCTCTTCGCGAGGTAAACTTCGAGATGGTTGAGGAAGTCCTTTCCTTTGGGCTCCGATTGGGTGGTTGCGGTTTGGGAGGGAGCAACGGTTGAAGCATTGGCATCCATGGGGGTTGAGAGAGAGAGAAGCCAATAAACTGCCCCGCGTACCTCGGCCGCGACCACGCTAAGC



gi|164370315|gb|ES841483.1|ES841483 UFL_077_54 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||.||||||| |
AGACAAACCAATGACTCTT-T

EST sequence (targeted fragment marked with yellow):
GGCACGAGCTAGTATTCTCTCAGCCTCTCAGGTTTTCCTCCTTTCACTTTTTACACTCTTCTAATTCCACTATATTTTCCCCTCTCAGTTTCTCAGTAACCAAACAGAGCACAAAATACCAGGAAACCGCAATAAAAATGACTGACGCTTCCGAGGAAGCCAAGCAAATTGAGAAGCTCTACGAATTTGGCGAACGCCTCAACGAGGCTAAGGATAAGTCTCAGAATGTGAAAGACTACGAAGGAATCATCGATGCCACGAAAACAAGCATTAAGGCGAAGCAATTGGCTGCGCAGCTAATTCCCCGCTTCTTCAAGTTCTTCCCTAACCTCTCCAGCCGTGCTCTTAATGCTCATTTCGATTTGATTGAAGAAGAAGATTTGGCGGTTCGGGTGCAAGCAATTCGGGGGCTTCCTCTATTTTGCAAGGACACAAAGGAGTATATTTCTAAAATAGTAGACATTTTAGGGCAACTCCTTACTGCCGAGGAGATTGTGGAGCGTGATGCTGTTCATAAAGCCCTAATGTCTGTACTGCGGCAGGATGTGAAAGAGTCTTTGACAGCACTATTCAAGCATATTTGGAATGTTGAGGATCCGAGTCAAGATGACACTATCCGTGACAAGGTTTTATGCTTTATACGAGATAAGGTTTTTCCTCTTANAGCTGAACTCTTAAGACCTCAGGAGGAAATGGAAAGGCATATAACTGATTTAATTAAAAAGAGTTTAGGGGATGTAACTGGAGCTGAATTCAGAATGTTTATGGACTTCTTAAAAAGTTTGAGCATATTTGGGGGAGAAAGCTCCTCCTGAACGCTTGAAGGGACTTA



gi|164356251|gb|ES834612.1|ES834612 UFL_373_12 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|||||||.||| ||||.|| |
AAACAAATCAAAGACTTTTAT

EST sequence (targeted fragment marked with yellow):
GGCACGAGGAACTCGAATTTTTATTTTTATTCATCAAATGTGTTCTTCAACTTTCAAAATATAGAAAATGAATTTATCTTTTAAAAATGAAAATAGAAAACAAAAATGAGAAATATTTTCAGAAACTAAACAAAACATTAAAGTTTCCAACACCTGTGTGCGTTGACCACTTGATTAGTAGTAAGAAATCCGGTGAGGAGAAGAGGATCAGTCACCTGTATTTTAGGTTGCAGAAACTTAAGGTTAGACCATCGGTAAAAATCATCACACTTCAGCCTTCAATTGTTAAAAGTCAGACGAGATTTCTAGGATTTTCATTCCAAGCAGGGATTTAAATAACGGTCGCGGTCGCGTTACGTTTATCGCGGTTGCGGACATAACGGATGCTATTGCGGTCATCGCAGGTGTCGCGGTCGTGAATTTTTTTAAAATTCGCACAATTTATTGTAAAACATTCCAAGCCTTTTCCACAACTTCACTACTCTCCTTACTCTCTTCAGTAACCAAGGGCTTAACTTGACCACTTAGTTCTCCAATTTTACCGACTATTGCATGGCTTCCACGTTGTTCTTTACACTTGTGCACGTGTAAATCAAACAAACTCCTCTTTGTTCTTCACTTAAATTTTTTTATCAACAAATTCAACGTTTCATTACTTGAAAACACAGAGGAAATACACCCCCAAACTACTTTCTTTCAAAAATATTTCAGGAGAAAGAAAGTGAGTGCAAGTGTGCAACAGTTGTTCTGGTTTCAACAGCAACATGGATATTGCTTCAGCCTACAAGTATATCAAGTCAACTTCATCACTGTCGCTTCATGGCTCATCATCTTCATCCTTGGCTCACTTTTCCTTTGGGGAAAATGGTCTCAGGCTTCTCGGAATGTCAAAGTCTCTCATTTGTTTTTCAGGTGGTCATACAATCGGGCATATCCCATTTGCCCGGCTGTTTCGCGGGGGTTGTACAATTTCACTGGCCCCCGCAGAATCGACCCAACCATGGACAGCAAGCACGCTGAAAACCTTCAGATCTTAGCTACTACTCCTTCCTGCTCAAAAAAGGGGGGGGGCGGTGAACCTAAAGCTATTTCTTTTTCTATTTGGACCTGAAAGGGAAACCCCACCCTTTCTCTCATCCCTTCAACCTAAAGGCTGCTTTTAACCACTGGTAAAGGAAAAAAAAAGGGGGAAAAAGGGCCCCCGTTTTTTCCCCCCATTTTGGGCCCGTTACCCCCTATAATATGGGGGCCCGGCGAACCCCCCCCCCCTTTTTTTGGGGTGGGGGTCCCCCCCCCCCTTCTTCCCCCCCCTTTTTTTTTTT



gi|109866122|gb|DW495098.1|DW495098 GH_RMIRS_105_H03_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTTGTTTGGTTGCTGAGAACA
|||.|||||||| .||||| |
AAATAAACCAACAGCTCTTTT

EST sequence (targeted fragment marked with yellow):
ATCAGGCAGAGGACGAGACAATGCCAAGAACATAATAACAAGCTATATATGAAAAAAAAAGAATTATTTTTTCAGTAACAATAATAGTAAAATAAAACAAGGCAACTCGTAGCCTCTGTTCGGCAGCTCAGTAAATGATGGAAACCAAACAATGGAAAAACAGTATCATTTGATCTTTTTATAACCTAATAGACAAAGACATTTTAAATGCGTTTTGCTTTCTTTTTTTTTAACTAAAGAAGGGTTTTTTATTTGAAGGGAAAACAGTTTAACACGTAAAATAATTAAAAGCAACAATTTTATTTTCTTCCTCCGTATTTTCTCATCGACCAAACAGAATCTGATCCTAATGATTCATTCAAGAAGGTTTTATTGATTGAAACGTAAGAAGAAAAAGAAAAAAAGTAAACATACCTCCACGGTGTTTGGGAAAGTAAGAGCGACGACATCGCCGGGATGGATTCCGGAGGCGATGAGGAGAGAAGCAGCATGATCGATGATGTGTTGTAATTGAGCATGCGTCAAATCGAACTTGCCGGAAACTGATAGAGCTCGCCTGGTAGGGAACTCGGCCGCAGCCTTGTGAAGTAATCCTGTCAAAGTTACGGTTTCCATATTCTTTTTTTCTTTTCTCGACAACCAAATAAATGGTGAAAATATTGATT



gi|109869956|gb|DW498932.1|DW498932 GH_TMIRS_031_A05_R Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTTGTTTGGTTGCTGAGAACA
||||||||||| .||||| |
CAACAAACCAACCGCTCTTTT

EST sequence (targeted fragment marked with yellow):
ACTAATCATAAAAAATTAAAATTTAAAAGAGTCGGTCCCCCCACCCTTGCAACTTGGCAATGCCAGTGGCCACTACCCAACACAGATCCATATGCAGAAAGTTTAAATGCATGGTATGGTCCAAAAGTAGAAATTCCTAAATAATATAATGCAAAATAAAAAATATTAAAGGCCATAAGGATCCAGGATATTCCTGTTAAAAAGCAGATTCATATTAGAATTTTAAGAGAACGAATTATCTAACAAAATAACTACACCCAAAAGAATCGAATCAAATAAGAACCTGTTTAGGCGCCTTGTTCGTTCTGGTGAGCAAAATATCGAAAAAATTAAATCGAATAAACTGGTGGACTTCCATGTTCACCACGTATTAATGAGTGCTTGACTAACTGAACCAACCTAGGCATTTTCCATAAGTGGAAGGCTAAATTTTGCATCACATTAATGCTCATTAATGCATGAGTTGAATTTTCAGTTTCCTTGTGCAAGAAAAATGGTCAAGAAAAATGAGCATTAACGCATTTTCTCGCCAACCAAACAACATAATAATAAAAAGTTCCTGGGGAAAAAAAAAGGGAAGAAAAGTTTATAACTTACCGAGAATAAGCATTGCATCCGGAAGAGCTCCAAGCATAGGCAAGAACAATCCTCCAACAATACCGGGACCGAGGATCTCAAGCAAAAGCTCACTTCCATANGACAAGTACGTAGCAGCCAAATACATGAGGTATCCATAAACAATGATCAAAAACATGTTCCC



gi|109857633|gb|DW486612.1|DW486612 GH_RMIRS_059_D04_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTTGTTTGGTTGCTGAGAACA
.||||||| ||||||||||
GAACAAACAAACGACTCTTAA

EST sequence (targeted fragment marked with yellow):
ACTTTTTTAAATTCTCAGCAAACAAACAAGCCGCCAGTCATGAGTAACATCTCATCCTCTTTCACTCTCTCCCAATGTCAACAACAACATCTCTTGGAAAAACTCGATGTCTTCAACGTCAAAGGCAGAGATAAACGCGGTCGTAATGTTCTTCTCATCATCGGCAAATACTTTCCTGCTCGCATGGTTAGTAGTGAGGTTCTGAAGAAGTATTTAGAAGAAACGATTTACCCCAAATTAGGGGCAAAACCGTTCTCGGTGGTGTATGTACATACAGATGTTCAAAAGAGTGAAAATTTTCCTGGAATATCAGTTCTTCGATCAGTCTACGATGCTATTCCGATGAACCTCAAGAACAATCTCGAGTTTGTTTATTTCTTGCATCCTGGATTACAGGCCAGACTTTTCCTTGCCACCTTTGGCCGTTTGTTTTTCGACGGAGGGTTGTATTCTAAACTTAAATACGTGAGTAGGCTTGACTTTCTATGGGACCATGTGAGGAGGTTGGAGATGAAAATACCAGACTTTGTGCATGATCATGATGAAGAGCTGGAGTACCATCCCATGATGGACTATGGGTTAGAGAGCGACCACCCTAGAGTTTACACTGAGCCGCCCTCCATGGATCCTATTTCGATGTACTCTATGAGGTGCATAGCTTAAGCTTTAAGCCCGTGCTGAAAGGTTGTCTCGTCCTCTGCCTGATG



gi|73848662|gb|DT457682.1|DT457682 GH_ON34O20.r GH_ON Gossypium hirsutum cDNA clone GH_ON34O20 3', mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.||||||||||||||||| |
AGACAAACCAACGACTCTT-T

EST sequence (targeted fragment marked with yellow):
CATATATATATATAGGTTGATTTATTTATGGTAACATGAAAAGCCATAGTACATGAGTATTTTATGTGTGTTTCTAAAATGCATAGCCTCTCATACCACGCCTGCTGTTAAACCAAATATTTCTCTGGGGGAAACACTGTAAATAGCTAATCCACTGGTACTTCGACCTCCATTTTTAGTTCAGAGATCCCAAAAATCTTATTGAAGTCATCCAATGTTAGGTAAGAGTCCTTTGAGTAACCCGCTTCTTTTAAAAGTTGGGTCAAGACTTGCTCTCTTTGGACATCGGAAATAAATGAACCAGATAAATCACGTAAAACTTCTAGCATGTCATTGAAAGACACCTTTCCATTGCCGTCAGAATCATACACCTTGAAGATAAGTTTAACTTTCTGCTGTACACTTGCTTTAGCACTAAACGCTGACAAGAAGGCGACAAAGTCCTTAAAGTTCAAACCATCCACCATCTTAAGCAGTCTCTGAGAGAGCGGATTCATTGCAAACTCCGGAACTGATAGAAACTCATCAGCAGATATGAATCCCTTTGCATTTCGATCTAACTGGCAAAACCTTTGGTACAATGAAACAATTTCCTGCTGAGAGAATAAATTCTGGCAGTATTCTTGAACTTCTTCAATATCATATTGAGTTAGCATTGAAGAAGAATTCCCCATTGTATCTCACTGATAAAAATCTTTAAAATGATCTACTTTTCAACGAATTGAAAAGAAGAACAAAACTTTTGAACTGTTTGATTCCAGAGAAATAGTAAGAAACAAGGAAAATCAGAATTCCGCAAACGAGATGCATATGCAACCGAGCTTTTGGCCTAAATTTGAAGTGAAAAGTTCTTTTTCTATTTTTTGTAGAAATAATCCAGCAACAGAATCAATGCCATTAAGATGTTTCTCAGCAACCAAACAGAAAACCCAAGAAAATAAAAGCGGACGCGTGAATGGAC



gi|193217924|gb|EY197146.1|EY197146 B06_P-25_046 Cotton ovule and fiber 3-5 days post anthesis Gossypium hirsutum cDNA, mRNA seq

TTTGTTTGGTTGCTGAGAACA
|||||||||||.| .|||| |
AAACAAACCAATGTTTCTTTT

EST sequence (targeted fragment marked with yellow):
TCCATTAATCTCCTTTCATTGCTAGCTCTCATCTTCTTTAGNTATGGAGATTGCTTCTATTTTACTATACATTATCCTCTTCCTCTCCACTCTTCTTTCATTATTAAAGAAACAAAAGAATGGGATTCATTTTAAAAAATTCAAGCTTCCACCTGGTTCAATGGGTTGGCCATACGTTGGTGAAACTCTTCAACTCTATTCAGAAGACCCAAATATTTTCTTTGTAACCAAACAAAAAAGATATGGTGAAATATTCAAAACCCATATACTGGGTTGCCCTTGTGTGATGTTGGCCAGCCCTGAGGCGGCTAGGTTCGTGTTGGTGACACATGCTCATTTGTTCAAACCGACGTACCCGAAGAGCAAAGAGAGGCTCATCGGTCCTCACGCACTGTTCTTTCACCGAGGCGGATACCATGCTCGGTTGAGGAGATTGGTGCAGAACTCGTTAGCACCTCAAACTATAAAGAAATTGATCCCTGATATTCAAGGCATTGCTGNTTCGACACTCGAATCATGGGCTGCTTCTGGNCAAGGGGTAAACACCTTTTACGAGAAGAAAAAGTTGTCATTCGATGNCGGCATTTTTGTCCATTTTTTGG



gi|109887598|gb|DW516567.1|DW516567 GH_TMIRS_202_H02_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTTGTTTGGTTGCTGAGAACA
||||||||.|| ||| ||| |
AAACAAACTAAAGACCCTTTT

EST sequence (targeted fragment marked with yellow):
AAAAAAATCCAAGCCTAAGATCTCAATTCCTGTTATTTTCTCCCATTTTCCCAGAAATCAAACAAAAGGAAATTTTGTGTAAAATCCACATCTGGAATATGGGTTTCTTGGTAACAACCCTGATTTTTGCTGTAATTGGGATAATTGCATCGCTTTGTACCAGAATCTGCTGTAACAGAGGTCCCTCTGCTAATCTGCTCCACCTAACACTGGTCATTACAGCAACGGTCTGTTGTTGGATGATGTGGGCAATTGTATATCTTGCACAAATGAAACCACTCATTGTCCCCATTTTGAGTGAAGGAGAGTGAAATTCTTCGCACGAGATCATTTGCGAGGTTATCGGTAAACAAGCTGTAGACATATTTGATTGTGGATTAGCCTCTGAATTTGGTTGTCATGTAATATGTCTTTCTCATGTCGTTTCTGTAATTAAATCCTTATTCAAAGCTTGAACTTTGAATTGGTATTATGTTAGCAGTACTTCATTATTTGTTTCTCATTTGTTCAGTTTTTCATAAAAAATAGTGTTGTTTCCATTAGACATTATGCAGTTTTTGATGAAATAATATCGAAAAAAGATTACATTTAT



gi|109887124|gb|DW516093.1|DW516093 GH_TMIRS_198_A08_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTTGTTTGGTTGCTGAGAACA
...|||||||||||||||| |
GGGCAAACCAACGACTCTTTT

EST sequence (targeted fragment marked with yellow):
TCGTACTTATTATTTTTTCCATCATTTTCTCGCGTTTTCTCAGCAACCAAACGGGGGTGAGGGGAGCAATAATGCAGTCGTTCATTAGTGGGAGTATCCGCTTGGGTCAAAAACAAGGTTTCTGCAGATGGAACAGTGCACATTTCAAAGTCTCTACCAGAGCTTTTCTGCCTACTCACAGTAGCAACAGCCTAATCCATGGAACCAACGATTCAATCAAATCTTCCGAGAATAATCTCCTGNCACTTCTAGGAACAAGAATTTGGATCCCAACAA



gi|73852017|gb|DT461037.1|DT461037 GH_ON40E03.f GH_ON Gossypium hirsutum cDNA clone GH_ON40E03 5', mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|||||.|||||. |||. |||
AAACAGACCAATTACTTCTGT

EST sequence (targeted fragment marked with yellow):
CTTATAGAGAAGGAGTCCTCATTATAACGAAAGCCCACCAGCATTGTCTTCATTAACCAGACAAAATTTTGTACTTCAAAGCTACAAATTTTGCTAAGAGCATCCATAGGAATTGGTCTTTAACGAAGGATAAGAGGGCTACGAGGAACAATATAATAAGAAACAAACATTGGTCTGCTGTCAAACGACTCAATTGTCACCAGGTAGAGACTTGATGATGGCAGAATCACCTGGATCAACTATACTCAAGCAGGATACGCGGAAGTACTTCCCACAAGCAGTTCCCGGATCATTATTGTTTCCATTATAATGATGCACCCCAACTTTACAAAGCATGGGAGAGTACTCAATCTCATATTTCCTCAAAGGTGGACAATTGTTGGAAATAATAATCAGTTTCCCTTTGGAGGACCTTAGAGACTTAAGCACTGTTTTATAACCAAGAGTGTATTTTCCACTCTTCATGACAAGAGCCAACCTGGTGTTGATGCTTTCAGGGGGCTTCTTCGTCTTCTTGCCGGCCCGGACGCGTGG



gi|78354768|gb|DT575042.1|DT575042 EST1085682 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|||| |||||||| .|||| |
AAACCAACCAACGTTTCTTTT

EST sequence (targeted fragment marked with yellow):
CTCCAAATCCCCCCACCCCCTTTTACTGCATTTTCTTTGCAACCAACCAAAGGATAAGCTAAGAAACAAGAGTTCAGGAGGGAAGAATAGGGCACCTTAAAGATTGAATCTTTTCGAGATTTTTGATTTTGGGTCTTTTTATTTTTTAAGCAAATGGCTAGTGGTGGTGGAAATAATAGGAATGGGACTCATAGGAACTCTCTCAAAGGAACGACAACAACATCAACAGCATCAACAGATAAGCCACTCTCTGTGAATTCCAACCCTTCAAAGCCTGCATTCAAAAACAAGTCTTCGCCTTTGACCGGTGCTTCTTCCGGGTTAAGGAAGAGTAGCCCCGGATCACTTGGAGGTGGAGCTGCCAAAGATGATGCTGGAGTTCCTGGAAGAGTTCGAGTGGCTGTGAGATTACGTCCACGTAATGCAGAAGAGTCAGTAGCAGATGCTGATTTTGCTGATTGTGTAGAACTTCAACCAGAGCTTAAAAGGTTAAAGCTTCGCAAAAACAACTGGGACACAGACACCTATGAGTTTGATGAAGTGCTGACAGAGTTTGCATCGCAAAAGCGTGTGTATGAAGTTGTTGCAAAGCCAGTTGTTGAGGGTGTTTTGGATGGTTACAATGGGACAATCATGGCTTATGGTCAGACTGGTACTGGCAAAACATATACTCTTGGTCGACTTGGGGAGGAAGATACAGCTAATCGTGGAATAATGGTCCGTGCTATGGAGGACATTTTGGCAGAAGTTTCACCAGAAATTGATTCTGTTTTGGTCTCCTATTTGCAGCTCTACATGGAGAGCTTACAGGATCTTCTTGATCCTACTAATGACAAC



gi|164275173|gb|ES844056.1|ES844056 UFL_106_66 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
. |||||||||||||||| |
GTACAAACCAACGACTCTCTT

EST sequence (targeted fragment marked with yellow):
GTCTTATTCTTTAAAACCAATGGATTTTTTTTTTCAAGTATCAGTGTATAGCCATTATTGATTTCTTGTTTTAGAGCTAAATTCCTCATGCGTACCTTATATAGTTAAATGGGTTTTCTTCCCTGTAAACACCTTTTTTATAAAGCTTTTATTTGGGATTCCTTATCTTTCCTTTTGCTGTTAAATTCTCTCAGCAACCAAACATGATTTATTTTCTTCCTTGGCTTTTTGATATGGTGATATAAGCATGACTTAAAAAAAGGTTTAGTGATGAATTAGCATCGTCTTCTTCCTTTTTCATTTATTGAAATCAATCCAAGTCCGTGAACCAGTCATTGGATTCTCCATAGCCAAAAAAACTTCGCATTCAACTCATCCCTCAAGCTATTCATTCTGGGAATTTGGATTCAGGGAGGACTAAGGTAGCTCAGTTTTAACAATTGAACTTAGGGGATGAAAATGTTGCAGCATGAGCTGTGTTCTTCTCGGATTCTGTCGCCGTTCCGGGATGAAATCGTCGGCGACGAAGAGCTTTCGGTTCTTCCAAGACACACCAAAGTTATTGTCACCGGGAACAATAGAACAAAGTCTGTATTGGTCGGTTTGCAAGGCGT



gi|109856027|gb|DW485006.1|DW485006 GH_RMIRS_050_E03_023_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA

TTTGTTTGGTTGCTGAGAACA
||||||||||| ||.|||| |
AAACAAACCAAAGATTCTTTT

EST sequence (targeted fragment marked with yellow):
ATCAGGCAGAGGACGAGACAAGCGGGGAGAATTTTACGAATATTTGGCTAGAACAAGGATTATTTGGTTTCAATTACTCATAGGCTTACAATCTTAAACAATTAATTTACACTATTTTGAACAAAAAGAAAAAAAGAAAAGAAGCTAGGTTGATTGCTTTGTTCTTGAATCAATACCTCCACAATCCACAAATACCATGGATCAAATCCAATTCTAATTACCCAAAATCAGGAAAATCGTTTCCAGTAAATCAAATCAGCAAATTCAAAGATAATAAAACTTCAATTACTCAAAATTGAATTAAAACACATTTCAATATCGGATTCATAAGAGGAAAAAGAAAAGAATACCTGAAGTGATTTTAATTTCAATTTCAATGCAACTACACATTTGGCATTGCAATACACAACATAATAGTTAGAGCAAAATAGACTATTAGAAACAAAGAAGAGGCCACACCTGCTTGAAGAGATATTGCAAGATTTTGGAAATTTTCCCAGAAAAAATAAAGAAAGTAAACTTACTGTGATTCTTGGGTTTTGATTGATTCCTTTATTGAGTCCTCCATAAGAGAAACTATCCATGTCGATAACGAAGCTATCGTGTTTATCAACTGTGTATTGAAACCCACCTATATGATCCGAAACTGAGATTTTTTGTGTTGAAATCTTATTGGAAGATGCCAAATCCAACTTGGGATTTTCCGTCAAGCCCAACATTTTCTCGGGAAAATGAAACGAAGAGGTGGTGGAGAAAATCTTCCAAACACGAATAANATATTTTCTTAGAAACCAAACAAATCTCATGATTTATACACAAAAGAACAAAGACTGATGCTTTTTTAAACTCCAAATCTTGTATTTGGGTATAAAGGTTGAAGCTTNCACTGATATATGTTGCAGAGAGATTTTAAAT



gi|164312199|gb|ES850088.1|ES850088 UFL_683_40 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
||| |||||||||..|.|| |
AAAAAAACCAACGGTTTTTTT

EST sequence (targeted fragment marked with yellow):
GGCACGAGGAGAAACGGCAGTTTTCACCGAGAGATTTGAATTTGAGGGAATGTTGAGAGCGATAGAGAAGTACAAGGTAACGTACATGCCAGTTTCGCCGCCGCTCGTCCTGGCGTTAACTAAATCAGATTTGACTAACAAGTATGACATCAGCTCGCTTCTGATGCTCGGAAGCGGCGGCGCTCCGCTTGGTAAGGAGGTTGCTGAGCGGTTCAAGGAGAAATTCCCAGCCGTGGAGCTTGTTCAAGGTTATGGGCTGACCGAGACGGGAGGAGGAGCTGCCAGGGTGATAGGGCCCGAGGAGGCAGCTCGGTACGGGACAGTCGGCCGCCTTTCTGAAAATACGGAAGCCAAGATAGTTGATCCAGTGACCGGAGAAGCCTTGCCTCCTGGGCAGAGAGGGGAACTATGGTTGCGAGGGCCAACAGTGATGAAAGGTTACATAGGGGACGAAAATGCAACCGCGAAAACAATGGATTCGGAAGGGTGGTTAAAAACCGGGGACATATGTTATTTTGACTCACAAGGGTTTCTCTACATCGTAGATAGATTAAAAGAATTAATCAAATACAAGGCATACCAGGTGAATCATATAAATGATGTTTGCTCTATCATCTTTTTATGACTAAAACAATCTCATTTTTTATCTGCAGGTCCCTCCAGCTGAATTGGAACATTTACTTCATTCCCATCCCGAAATCTCCGATGCAGCCATCATTCCGTACCCTGATGAAGAAGCCGGGCAGATACCTATGGCCTATATAGTAAGACAGCCTGGAAGTAGTATGAGTGAAGCTCATATCATGGATTACATCGCGAAACAGGTTGCACCGTACAAGAAGATCCGACGAGTTGCTTTTATCGATTCAATCCCAAAATCTCAGCCGGAAAGATCTTGAGGAGGGAGCTTGGTAATCATTCTTTATCTGCTGGTTTGTCAAAATTATAAATATGTAGGTTTGAATGTATAACGGAACCTTATGAACTTCTCATTTCTTGGTACAAAAACTGCCCTTATGAAAGGGAAAATTTATGGCTTTTTTTCCTCCTTTGCCTTTTGAAAAAGAAACTAAACTATGGGGTTAAAAAATATTTTCCAACATTTTCCTTTTTTTTTTTTTGGCAACCAAAAAAAAAAAAAAAAAAAACCCCGGGAGAATATCTTCTCAAGGGGGGGCCGCCGGGGGCCCCCTCCATATTTTCTCCCCCCCGGGGGGTGGGG



gi|109858357|gb|DW487336.1|DW487336 GH_RMIRS_063_D03_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTTGTTTGGTTGCTGAGAACA
|||||||||||.|.. ||| |
AAACAAACCAATGGTCCTTTT

EST sequence (targeted fragment marked with yellow):
AAAGAAAATTCTTTCCTTTTCCTGGTAACCAAACAAAGTCTAACGGATCCCAGAAGTTATGAACAGTCAAATCGAAAAAGCGTCATATCAAACCTACTTTTCCTTTTTTATTTAGCTTTGATTTTGAGGTTTTGCGTGGGCTAATTGGTTAGTTTTTGTTTCATTTGCATTAGTAAATTGGGACTTTAATAGTATTCTAGTTCTGAAATTTCAGCTAGGTTTACCGGCGCACATTGGATGGATTTTTTCCTCAAATATCGTTGTTTTATTTGTTGTTGTCATTTGCATTATTGCTTATTTGATTGTTCTAGCAATTTAGGTGTTTTTAAATTGATGGCGGATCGAAACACGACCGCTTCAAAGCCTATATGGATGAAACAAGCCGAGGAAGCCAAGCAAAAAACTGAGGCTGAAAAAGCTGCTGCTGCTAAAGCAGCTTTCGAAGCCACATTCAAGGATGTTGATAAGAACCGTAACAAGGATGTGGTGGCTGCTTCATCGGATAGTGAATCCGAGGACACCGGTGACTTGGTGAACAAGCCAATTGGTCCCGTGGATCCCGTTAAATGCATGGCCGCGGGGCCAGGAATAGCGGGTGGCACTGTCTGTGCTGCCTCCACGTTTATGGTGGTAACGAGAGATGCAGATGAAAGGAAAGTACAGAGTGGGGCTTTGTCTCGTCCTCTGCCTGATG



gi|78340490|gb|DT560764.1|DT560764 EST1071404 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
TTTGAATCCCATCGGTTTCTCATCAACCAAACAGAAAATTTCAGTCTACAATTCGAATTTTCGTTTTCTAAGTTAAAATAGAAGGGGAGTGAGGGATTGAGACTGATAGCGATAAGGAGATACTGTTTTTTTATTTGATTTAGCGAAGGATGTCTGCGGCAGTGTGCGGGAGCAAGAGATCGTTCTTCGAAGATATCCCGTCACCGCCATCGGCTTCTTCCTCTAAGAAGCTCCGGCGCTGCTCGCCGTCGTCTCCTTCTTCTGTTCGTTTCTCTCCGTCGCCATCTGCTCTCAATCACCTCCAATCTATCTTCCCTCACATGGACCCCCAGCTTCTGGAGCAAGCGCTATTAGAATGTGGCAATGATATAGACACTGCCATCAAGAAGCTGGAGGATCTTTGCTTAGGAGCAGCAGAGGCTAGAGGGGGAAAGACTTGTACCGTTGAGGAACTGGGCACAACTGCTGAGCAGGGTATATTGACTAATAATGGAGAAGCTGTTGCTGCTGCTGTGACTATTCAGAATCCATCAGCCTCTGAAAATATGCCTGCTGATGGTGCTGAATGGGTGGACTTGTTTGTGAGGGAGATGATGAGTGCCACAAGTGTGGATGATGCCAAATCCCATGTCTCTAAATTGCTTGCAGTTTTGGAGAATTCCATAAGTAAACGTGCTGCAGAAGAGACGGCACAAAATTTTCAAAAGGAAAATCTCGTGTTAAAGGGACAAATCGAAGCGA



gi|109862423|gb|DW491400.1|DW491400 GH_RMIRS_085_G07_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTTGTTTGGTTGCTGAGAACA
||||||||||||| .|||| |
AAACAAACCAACGTTTCTTTT

EST sequence (targeted fragment marked with yellow):
ATCAGGCAGAGGACGAGACAACGGCACCCATTATCTACTAATTCTTCAATCAATTTGCCAAGAAACTGCAGAAACATAAAGATAAATAAAACTGAAATATGCCTATATTGATACCAAAAACAATGAAATGAAATGAATTTTCTCAATTTCTACTTTTGCCCAATGCCCACATTTTCTTTGCAACCAAACAAAAAGGAAACTGACCTGATAATCGTCTCCAAATTCCTCCATAAAAGCAGCCTTAATAGCTTCAGCGGAAGCTCTATGACCCCCACCAGTATCACTCATCAAAATCAAAACTTTTCTGGGGGCCTCAGCTTCGACTCCATTTAAAGGCAAACCTTCAACCTCCAAAACACCACCACCGTCATCCCTCACTCCATTCCTATCCTCGGAACCGACCCGAACCGAAGCAAACCCGATCGGGATTCTTTCACAATGAAACTTAATCGCTCTATTGAACTCGTTCATGATCCTCCCAACGCTCGAAGAAACGCCGTTTCGAGCACCCAAACTGAGCGAAGCAACAGCTATAACTCTACGCCTTTTATGAGCAATCGAGCCTCTGAACCCCGAGAAATACACGTAATTTGGCTTGAATGAAGAAAACCCATCAGAATTCGAGCTGTAAAAGCTCTTGTTGAAAGCTAAGTGACCCGTTTGCGTAACGAGATCAATGGCAGAGCCAGATCCTTGGGTAATCTTTGAAGGGTTTTGCATTTTGGGAAGTTTTTTTTGGCTAGTTGCAGAGTTATGATGATGATGAGAAAAAAACTGAAAAAAATTTAAACCATG



gi|164267882|gb|ES792055.1|ES792055 UFL_548_29 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
.|||||||||||||||||| |
GAACAAACCAACGACTCTTTT

EST sequence (targeted fragment marked with yellow):
GGCACGAGTGTGTTTAGCAGTCAAATGAATTGGTTCTTTCTTTTTTTTTCTCAGCAACCAAACAAGCTAAGAAATCTGAAAGGAAAGTGAAAAAGATATAACCTTGAATTGAAACTAGTGTTTGGCTTTTGAGTCAAAGCAGTCAAATGAAATTACTCAAATTCACCCTGGGGCACGTCATATAACACCCATTACTCTGTTTTGTACCTTCAAGCTAGATCTCGCATGTGTTTTTCCCTTGGGGTTAGCCGCTTAGCTCATTTAAGCAGGGTTTAATGGTTAACAAAGACCTCCATGGCAGCAACAGAGAAGCTTTCATCTCTTTTCCCTTTGTTGTCGCTCATTTGCTTCATCTCTTTCTTTCTTCTTCTCTCTATTTCCAGAAAAGCCTCCATTTCCTCCTCCACAACTCATCCCCAATTCCTCCGTTTTAAACCCATCGACGCCAATCTCACCACCCGATCAGACCCATCTGCAACCGGCGATTCTTCATGCGGTTACTCCGATGGGTCATGGGTTTACGACCCAAATGCGGGATTTGATCGATACGACAGTAGCTGCAAGGAGATATTCAAAGGATGGAATTGCATTTTGAACAACAAATCCAACGGTAGAGACATCATTAAGTGGCGATGGAAGCCTCGTAACTGTGATCTCCCACCGTTCGATCCCCTCCAGTTTCTTCCCACTTACAGAGATACCAACATTGGGTTTATTGGTGATTCCTTAAACAGAAACATGTTTGTATCTTTGTTTTGTACTTTGAAACGTGTGTCCAATGATGTGAAGAAATGGCGTCCTGCTGGAGCTGATCGTGGCTTTACTTTCCTTCACTATAATCTCACCATTGCTTATCATAGAACTAATCTTTTGGCACGCTATGGTAGATGATCAGCTAATGGAAATGGTGGTAAGTTAGAAGCTCTTGGATATAAAGAAGGTTAAGAGTTGATGTTTATGTCCAAAGAACACATGGGAAAAAGCTCAAAGCTTCCATGATATACTAATCTTTAACACAGGACACTGGTGGGGGGGCTTCCTCAAAATTTGACCCAGTTTAGTCACCCCTGGCTTTTTCTTTGAAAAAGGGTCTACCCTGGAATCCCCTCCCAAACCTCCCGGATCTTTGGCTTGGGAAAAAGGTTTTTTAAATCCCCGGGGGAAACCGGGTTGTGGGGGAAAAAAAAACCCAGGGCAAACCCGGGGAAAGCCAAATTTAATAATTTTGTTTTTCTCCCCCCCCCCAAACTCCCCCCCAAAGGGGGCGTTTTTTTTTAAAAAGGGGGGG



gi|109881914|gb|DW510884.1|DW510884 GH_TMIRS_147_H03_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTTGTTTGGTTGCTGAGAACA
||||||||||||||||||| |
AAACAAACCAACGACTCTT-T

EST sequence (targeted fragment marked with yellow):
ATCAGTTTCCCATCGAATTTCTCAGCAACCAAACAAAATCTTCCATTGTCTTCTAGAACTTTCCAAGCACACTAGAGTTAATCAATGGCTCGTACAAAGCAAACAGCCAGGAAATCAACCGGTGGAAAAGCTCCATGTAAGCAACTGGCGACGAAAGCCGCGAGGAAATCAGCTCCAGCCACCGGAGGAGTGAAGAAGCCTCACCGTTTCAGGCCAGGAACAGTGGCGTTGAGAGAAATCAGGAAGTACCAGAAGAGTACCGAGCTTTTGATCCGTAGACTTCCGTTCCAAAGGCTAGTAAGGGAAATCGCTCAAGATTTCAAGACGGATCTGAGATTCCAAAGTAGTGCGGTGGCGGCTTTACAAGAAGCGGCGGAAGCTTATCTGGTTGGCCTGTTTGAGGATACCAATCTCTGTGCTATTCATGCCAAGAGGGTTACTATTATGCCTAAAGATATTCAACTGGCTCGGAGGATTAGAGGAGAGAGAGCTTAAATAATGTATATGGTGATTTGCTTTGAATGATTTATGCTTTTAGGATCTGTGTTGTTATGTTTTCTCTAGATGTAGATCTCTCAGTTTAGTGGTTTGTGTTCAGTGATTGATGAAATGAAAGTTTGGAAAGATCTAATTAGTAGTA



gi|109865524|gb|DW494500.1|DW494500 GH_RMIRS_102_F08_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTTGTTTGGTTGCTGAGAACA
|||| |||||||| .|||| |
AAACCAACCAACGTTTCTTTT

EST sequence (targeted fragment marked with yellow):
CTTTTTACTGCATTTTCTTTGCAACCAACCAAAGGATAAGCTAAGAAACAAGAGTTCAGGAGGGAAGAATAGGGCACCTTAAAGATTGAATCTTTTCGAGATTTTTGATTTTGGGTCTTTTTATTTTTTAAGCAAATGGCTAGTGGTGGTGGAAATAATAGGAATGGGACTCATAGGAACTCTCTCAAAGGAACGACAACAACATCAACAGCATCAACAGATAAGCCACTCTCTGTGAATTCCAACCCTTCAAAGCCTGCATTCAAAAACAAGTCTTCGCCTTTGACCGGTGCTTCTTCCGGGTTAAGGAAGAGTAGCCCCGGATCACTTGGAGGTGGAGCTGCCAAAGATGATGCTGGAGTTCCTGGAAGAGTTCGAGTGGCTGTGAGATTACGTCCACGTAATGCAGAAGAGTCAGTAGCAGATGCTGATTTTGCTGATTGTGTAGAACTTCAACCAGAGCTTAAAAGGTTAAAGCTTCGCAAAAACAACTGGGACACAGACACCTATGAGTTTGATGAAGTGCTGACAGAGTTTGCATCGCAAAAGCGTGTGTATGAAGTTGTTGCAAAGCCAGTTGTTGAGGGTGTTTTGGATGGTTACAATGGGACAATCATGGCTTATGGTCAGACTGGTACTGGCAAAACACATACTCTTGGTCGACTTGGGGAGGAAGATACAGCTAATCGTGGGAGTTGTCTCGTCCTCTGCCTGATG



gi|84168827|gb|DR457475.1|DR457475 CM055F06 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
||.|||||||| |||||| |
CAATAAACCAACCACTCTTTT

EST sequence (targeted fragment marked with yellow):
CACGATGATTTATTTTCTGAAAATCTCGTCTCTACTTTCCTCGATCCTTCGATTTTCTCACCAACCAAATAACATATCACTGTTTAGGGTTTTGGTTTTTACTATTATTTTCCTCCAAAACCAAGCGAGAATATTTCCGCGATATCTTTTCAAACATATAGATATCAAATGTGCCTCTTCTTTCCTTCTTGTTGTATGTTGTCTCTTCTCGATGACGATTCCTCTCACTTCGATATATCAAACGAGGAAACAGACAAACTTGTTGCAGAAGTAGTTCGTTACATACTGTTCAAAACACATCAAAATTCAGGATGTCCAATTAAAAGGGAAGAACTCTCTCAATTAGTCACTAAAAACTATCGTCACCGCTCGCTTCCTGCTTATATCATTAACGAGGCTAAAGCCAAACTCTCCACCATTTTTGGTTACGAATTAAGGGAACTTCAAAGATCACGTCCTTCTTCCACAAACCACTCCCGATTGTCTCAACAGAGTGGAGTTGATGCCAAATCCTATGTTGTCACAAGCCAGTTACCAGCTGAGGTGTATAAGAAATATGTTGAGGATGTTAATACATCTCATCTTACTGGTTTTACTTTTTGTTGTGATCACGATTGTGCAGCTTTCCGGAGGGTTAATGGCTGACAAAACTCTTGGCTCATTTGACAAACTGGGTTTCTTGAACAGATTAACCA



gi|6461724|gb|AW187288.1|AW187288 BNLGHi12477 Six-day Cotton fiber Gossypium hirsutum cDNA 5', mRNA sequence

TTTGTTTGGTTGCTGAGAACA
..||||||||| |.||||| |
GGACAAACCAAGGGCTCTTTT

EST sequence (targeted fragment marked with yellow):
GTTGCTTTGATTGGTTTAGATTTGCTTGCTTTCGGTATATTTGATACGCTTCTTTGCTTTTCAATTCATCTACCCATTTATTGCTTCACCTTCTCTAATTTTCTCGGGAACCAAACAGGGGAAATTTGGGTTCTTGTTCTGAAAATTCAATGACTTTCAATGATGATAACAATGATGATGAGGGAGGAGAAGTGGTGCCGGAGCTGAAATTACGAGTTGAGGGTGATGATGATGTTAATGAGAAAAGGGTAAGTTTGAGACAGAGATTATTAGAAGAATGTGAAGCGGAAGAGAATAATTCTTTAAGTTTGAGACAGAGATTATTAGAAGAATGTGAAGCGGAAGAGAATAATTCTTTGTTAAAAGAGCCAGGTTTTTCTTCTCAATCGAGAAGGTCTATTTGGTACTGGATCAAGTTGGGAATTTTACTTACCTTTCTAGGGTTGCTGGTTGCTGTTTTTCTCAAATGGGTTGGCCCTTTTTTTCATGGATAAGGAGCTAATGCCTTTAATTAAATGGGAGATGGCAACCTTTAGTACTCCAATGCTGGCAGTTCTAATCTTTGCTTCTGTGGCATTATTCCCCAC



gi|164298701|gb|ES817322.1|ES817322 UFL_178_52 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|||||||||||||. ||| |
AAACAAACCAACGGACCTTTT

EST sequence (targeted fragment marked with yellow):
ATTTTTCTCATTCTCTCTCTTAAACTTCCCAAAGTTCCTTTTTTCAAGGTTTTTCTTTTTTCCTTTCCATTTTCCAGGCAACCAAACAAACAAAACCATGGGGTGATATACTAACTCAAGAACAGATTGTTGAGTTCAAAGAAGCCTTCAATTTCTTTGACAAAGATGGAGATGGTTGCATTACAGTGGAAGAATTGGCAACAGTGATAAAATCCCTTGATCAGAATCCCTCTGAAGAAGAGCTTCAAGATATGATTAATGAAGTTGATGCTGATGGTAATGGAACTATTGAATTCTCTGAGTTCCTGAACTTAATGGCCAAGAAAATGCAGGAAACTGATGCAGAAGAGGAGCTTAAAGAGGCTTTCCGGGTTTTTGACAAAGATCTAAATGGCTATATTTCAGCTTCTGAGCTGAGAAATGTGATGATGAACTTGGGTGAGAAATTAAGTGATGAAGAGGTTGAGCAGATGATCAAAGAAGCCGATTTGGACGGTGATGGTCAAGTCAACTATGATGAATTTGTCAAAATGATGACGACCGTTGGATGAACATACTTTTTCTTCATCATCAACACATATGTATAATATTATTACTAATTTTGTATTCAAATNTTATTTTCTTTCAAGCTTGTATTCTCCAATAAGTCCTTTTTAGTTTATTTGTTGTACTCTTTTTTTTTCTTTTTCTTTGTTCTCGGTGTATCCATTGATGTNCAATGACGTCCAANAGTTAATTAGATGAATGACTTTCACAAAAAAAAAAAAAAAAA



gi|84150081|gb|DN781381.1|DN781381 G.hir-Cotyledon 1909 cDNA from Cotyledons Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
GCACGAGATCAAAGCCAACACCTTTCGAGTAGAATCCCATCAAATTTCTCATCAACCAAACAGAAATCTCATCCCCCTACAACCCCACTTCTCTTTCCAAATTAGATAGAAAGAAGGTGAGGGATTAACATTGATAGAGGTAGAAAGAGAGTTCTTCTTTGATCTTGCGAAGGATGTCTGCGGCAGTGTGCGGGAGCAAGAGATCTTTCTTCGAGGATATCCCGTCATCGCCATCGGCTTCTGTCTCTAAGAAGCTCCGGCGCTGCTCGCCTTCGTCTCCTTCTTCTGTTCGTTTTGCTCCGCCGCCTTCTCTCCTTGATCACCTCCAAGCTCTCTTCCCTCATATGGACCCCGAGCTTCTGGAGAGAGCACTACTTGAATGTGGCAACAATATAGACACTGCTATCAAGAGGCTTCAGGAACTTCACTTAGGAGCTGCAGATGCTACAGGGGAAAAGATGGGTCCTGTTGAGGAACTGGGTACAACTGCTGAGCAGGGTACAGTAACCAACAATGGAGAAGCTGCTGATACTACTGCTCAGATTCCATCGGCCCCTGAAACTCTGCCTGTTGATGGTGCAGAATGGGTGGACTTGTTTGTGGGGGAGATGATGGGTGCTTCAAGTGTGGATGATGCCAAAGCCC



gi|5047835|gb|AI728983.1|AI728983 BNLGHi12294 Six-day Cotton fiber Gossypium hirsutum cDNA 5' similar to (AC002396) Unknown prot

TTTGTTTGGTTGCTGAGAACA
..||||||||||||||||| |
GGACAAACCAACGACTCTTTT

EST sequence (targeted fragment marked with yellow):
GGAATTTCGTACTAATTATTTTTTCCATCATTTTCTCCTGTTTTCTCAGCAACCAAACAGGGGTGAGGGGCAGCAATAATGCAGTCGTTCATTAGTGGGAGTATCCGCTTGGGTCAAAAACAAGGTTTCTGCAGATGGAACAGTGCACATTTCAAAGCCTCTACCAGAGCTTTTCTGCGTACTCAAAGTGGCAACAGCCTAATCCATGGAACGAACGATTCAATCTCTTCCGAGAATCATCTCCTGCAACTTCTAGGAACAAGAATTGGATCCCAAACAAAAGAATTGATGTTTCCCAGCAGTTCTGGTGGATGTTTGATTCCAAGTTTGTCTCGATTGGCTGCAATGATGTCTTCATCTTCTANCAGATATATGACAACAGCTGCCTCACCTACAATGGATTCTTCTGAATCTGTCACTGATGTGCCTACTCGAATTAAATTTAAAAAGCTTGAAAAAACTGCCAAGCACATAATGCAAAATGTGGAATAAGGAACAATGGAAGAACTTAAAGGGCCAAAGGAAGATACCTGAAAATANACCTTGGCTAACATGGTGCCACTCCAAAATGGAAATTACCTGAAAAACAAACCGAACTGTTTCAACCCATAAAAAGGTTATCCGTTAATACCCAGAAACTAATTGCTGGCCCTGAATACCAACTTCCCGGAATAACC



gi|164335301|gb|ES836602.1|ES836602 UFL_021_91 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
TCGGCACGAGATCGGTTTCTCATCAACCAAACAGAAAATTTCAGTCTACAATTCGAATTTTCGTTTTCTAAGTTAAAATAGAAGGGGAGTGAGGGATTGAGACTGATAGCGATAAGGAGATACTGTTTTTTTATTTGATTTACCGAAGGATGTCTGCGGCAGTGTGCGGGAGCAAGAGATCGTTCGTCGAAGATATCCCGTCACCGCCATCGGCTTCTTCCTCTAAGAAGCTCCGGCGCTGCTCGCCGTCGTCTCCTTCTTCTGTTCGTTTCTCTCCGTCGCCATCTGCTCTCAATCACCTCCAATCTATCTTCCCTCACATGGACCCCCAGCTTCTGGAGCAAGCGCTATTAGAATGTGGCAATGATATAGACACTGCCATCAAGAAGCTGGAGGATCTTTGCTTAGGAGCGGCAGAGGCTACAGGGGGAAAGACTTGTACCGTTGAGGAACTGGGCACAACTGCTGAGCAGGGTATATTGACTAATAATGGAGAAGCTGTTGCTGCTGCTGTGACTATTCAGAATCCATCACCCTCTGAAAATATGCCTGCTGATGGTGCTGAATGGGTGGACTTGTTTGTGAGGGAGATGATGAGTGCCACAAGTGTGGATGATGCCAAATCCCATGTCTCTAAATTGCTTGCCGTTTTGGAGAATTCCCTAAGTAAAACGTGCTGCAGAAGAGACCGCACAAAATTTTTCAAAGGAACATCTCGTGTTAAAGGGACCAATCGAAGCGATGATTTCAGAACATACCACCCCTCCACCGCTGAGTGGCAATCCCCACATGAACCACAAAAGGAGTATCCAGATAAAACCCAACAGTTTGAACCCGTTTAAAGGCAATTGCGTGTCTCCAATCCCCGCCAACAGCATTCCAACCTTTTAGAAGGTAAAATAACCTATGCCTTTTGATGAATCCATCTTGAAAAACAGGGCACCCAGCAAACGCCACCTCCCGTTCC



gi|109850133|gb|DW479112.1|DW479112 GH_RMIRS_017_H07_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTTGTTTGGTTGCTGAGAACA
.||||||| |||||||||| |
GAACAAACAAACGACTCTTTT

EST sequence (targeted fragment marked with yellow):
ATCAGGCAGAGGACGAGACAAGGCACCCCAATATCAAATTCATTTAGAGGAACAAAAACAACATAAAGAGAATAAATATTCCGAGGTTCGTTACTTAGCTAGAAAGGTTCCTGCACTAAGAGACAAACATTTGTTTTGTATATGCCCAAATTTATCAACATTCAAGAAAAACATTGTAATATTCACAAAATATATATCTAATGTTCAATGAAAGTAACCGAATTAGCAGTACTTACTTCAATTACATTATCTCAAGCACACCAAAGCAAAGCAAAGAAAGGAACTGTACTTGAGTCAATTTTCGCCTAAATCAACGATTAATCAAAACTGCATTTTTTTGAGTTTTCTCAGCAAACAAACAAGAAAATTACTTAGCCCTAATTGCCATCGATAAACAAAAGCAATTAATAATTGACTGGAAGGAAAACAAAAGGCAACATTGAAAGAAACCCTAGAATGTCGATCGTACTGAAGAAAAATAAGCCTAATCTAGTGTTACTAAAGCCACTTAGAAAGAAGATAAAATAAAAATAACATAAATATTGCAGAAAACGAGGGAGTTATTATAATTTTTTTTAAATGAAAAGGGAAAAAAACAGTGAAGGCTCAAACCTGTCGTCGAAATTTCACCCCACTAAATGCAGGGAACAACAATTAGCCTTATCAATTCTAAGAAAAAGGAAAAATGATCGAGAAATGAATGAAAAGAATAGTGTGTCTGGATGAAAGGTAAACAAAAAAACCGAATGTTTTTGGTTAAAGCGGTCGGGAAAATATTTCTTTTCCCTTATAAATGCTAAAAGAGAAAATGTGACGACNAGACTTTTTCTACTTTCTATACCGAGGCA



gi|78342948|gb|DT563222.1|DT563222 EST1073862 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|..|||||||||||||||| |
AGGCAAACCAACGACTCTTTT

EST sequence (targeted fragment marked with yellow):
GATATAATTTGAAAGAAAAGAAAAATGGTTCTGCTAGAGAAACTTTGGGATGATGTAGTGGCCGGACCTCAACCGGAACGTGGCCTTGGCCGGCTGAGGAAGATCACAACCACCCCACCCTTGTCCACCAAAGATGAGGCTTCATCAATGGCGATGCCGACGAGTCCGACGACACCTGGGACACCGTCGACGCCGGTGTCGGCTCGTAGGGACAACGTGTGGAGGAGCGTGTTCAATCCAGGTAGCAACCTTGCAACCAAAGGTATTGGCGCTGAAGTTTTCGACAAGCCTCAACCTAACTCTCCTACTGTTTATGACTGGTTCGTACAGATTTTTTTTCTTGTTCAGTTATTTGCATGCATGCTTGCTTGGATAATTGGATATATATAAGTGGGACTTTGATTTTGCTTTTTGGATGTTTGTGATCCCCATCTGTTTGGTTGCTGAGAAAATTAATCATAGAAGAGTCATATATAAATATTAACCAGGTTTTTTGGAATTTGGATTCTTTTTAATATATAGTACTAAAATGATGAGTTTTTCAAAAAGGAAGCCTCAAAAACTTTCCTGTTTGTGTGTGTTTTTTTTTCTAACGTTTTCTCAGCAACCAAACGGAGGCTCAGAGACAGATCATGCAGGAAAACTTGGCTCTTTGTTTGGTAGCTGCGTGGAAATAACAGTATGCTGTAATTATTACACTAATCCATTTATAAGCTTTTATTTTTAATTATTCTTGTTTATTTACTATAAGATGATAAATAACCAAAGATTAATTAGGGTAATTTGCATGGATCTAATTTCTGGGTGTTAACTAAAATTTAAGAAGAAAGTTTGGTTCGGATGGGGATGGGAT



gi|6461299|gb|AW186863.1|AW186863 BNLGHi6241 Six-day Cotton fiber Gossypium hirsutum cDNA 5', mRNA sequence

TTTGTTTGGTTGCTGAGAACA
||| ||||||||||||. ||
AAAGAAACCAACGACTTGTGG

EST sequence (targeted fragment marked with yellow):
CTTTCCTTTTCCTCTGGTGTTCAGCAACCAAAGAAACTGAAACAACGCTCCCTGTATCTCTGATTCCAACAGATCGTTTCCCACAACTTTGTTGATGGTGACTCCCAAGCGTCAAGTCCCTTCCTGTTGCTGATGTCATGAAACCCAACAGTCGATCCTCATCCCTAACCCTTAAGACTCCAAAACCCTTGAGCTTCCTCCCACCTTTTTTATCCCCACTGTTTCAAATTAGTCATCTGCGACAACTCTTGCAAACCCCCTTTCTCCGTCCACCAATAGAGCCCAACGATCCCTTTCCACTGCCATCAAAGCAAAATTTGGCACACCTCCGCTCAGGACATCACCTTCCAAAACCACCTCTTGTAATCCAAGATCCAACCCCAAATGACTATGCAGAGACATGCAAGAGCCTCCGTAGCAAACGCCAAAGATATATGCTCATTTAACATTGCTTGAGAACCAATTACATGGCACTGTCGATCTCTGACAACTATCTATGTGCATGACTTCTTAGCTTGTTCATGAAAAGCAGCCACAAAATTAATCTTCAAACAATGCTGATCCGGAGGCTTCCATCTCTCATCCCTGATCTGTTGATAAGTGATAAAAGTAACATATNTTAATC



gi|164251892|gb|EV496024.1|EV496024 sg077F06 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
||||||||||||||||||| |
AAACAAACCAACGACTCTT-T

EST sequence (targeted fragment marked with yellow):
AATTTCTCAGCAACCAAACAAAATCTTCCATTGTCTTCTAGACTTTCCAAGCACACTAGAGTTAATCAATGGCTCGTACAAAGCAAACAGCCAGGAAATCAACCGGTGGAAAAGCTCCACGTAAGCAACTGGCGACGAAAGCCGCGAGGAAATCAGCTCCAGCCACCGGAGGAGTGAAGAAGCCTCACCGTTTCAGGCCAGGAACAGTGGCGTTGAGAGAAATCAGGAAGTACCAGAAGAGTACCGAGCTTTTGATCCGTAAACTTCCGTTCCAAAGGCTAGTAAGGGAAATCGCTCAAGATTTCAAGACGGATCTGAGATTCCAAAGTAGTGCGGTGGCGGCTTTACAAGAAGCGGCGGAAGCTTATCTGGTTGGCCTGTTTGAGGATACCAATCTCTGTGCTATTCATGCCAAGAGGGTTACTATTATGCCTAAAGATATTCAACTGGCTCGGAGGATTAGAGGAGAGAGAGCTTAAATAATGTATATGGTGATTTGCTTTGAATGATTTATGCTTTTAGGATCTGTGTTGTAATGTTTTCTCTAAGATGTAGATCTCTCAGTTAAGTGGGTTGGGTCCAGTGATTGATGAAATGAAAGTTTGGAAAGAATCTAACT



gi|73846715|gb|DT455735.1|DT455735 GH_ON02H04.f GH_ON Gossypium hirsutum cDNA clone GH_ON02H04 5', mRNA sequence

TTTGTTTGGTTGCTGAGAACA
||||||||||||||||||| |
AAACAAACCAACGACTCTT-T

EST sequence (targeted fragment marked with yellow):
ATCGAATTTCTCAGCAACCAAACAAAATCTTCCATTGTCTTCTAGAACTTTCCAAGCACACTAGAGTTAATCAATGGCTCGTACAAAGCAAACAGCCAGGAAATCAACCGGTGGAAAAGCTCCACGTAAGCAACTGGCGACGAAAGCCGCGAGGAAATCAGCTCCAGCCACCGGAGGAGTGAAGAAGCCTCACCGTTTCAGGCCAGGAACAGTGGCGTTGAGAGAAATCAGGAAGTACCAGAAGAGTACCGAGCTTTTGATCCGTAAACTTCCGTTCCAAAGGCTAGTAAGGGAAATCGCTCAAGATTTCAAGACGGATCTGAGATTCCAAAGTAGTGCGGTGGCGGCTTTACAAGAAGCGGCGGAAGCTTATCTGGTTGGCCTGTTTGAGGATACCAATCTCTGTGCTATTCATGCCAAGAGGGTTACTATTATGCCTAAAGATATTCAACTGGCTCGGAGGATTAGAGGAGAGAGAGCTTAAATAATGTATATGGTGATTTGCTTTGAATGATTTATGCTTTTAGGATCTGTGTTGTTATGTTTTCTCTAGATGTAGATCTCTCAGTTTA



gi|73850340|gb|DT459360.1|DT459360 GH_ON37I24.f GH_ON Gossypium hirsutum cDNA clone GH_ON37I24 5', mRNA sequence

TTTGTTTGGTTGCTGAGAACA
||||||||||||||| .| |
AAACAAACCAACGACGTTAGA

EST sequence (targeted fragment marked with yellow):
CTTTTTTTGGGAAAAAAGGAACCACCCTTTAACTTTGTTGCCTTGGGGGGGGGCTTTGAATCTGATACATCAAGTACATTTTCAAAGATTGCAGCAACCAAACAAAGTAACTATTATATTTGATTTACCAAGTTTATTTGTTCATTGATGCAAATTTTTAGCTATGGGATTGGCATCTCTAAGTCATGTTTCTGAATACAAGTGATTGTTAATGACAATTCTAACAACCACAGGAATTCTTACTACATGAATGCCCTCTTCCCAGTATAGGTTTCCGAACGAGTATCTTCCTTGAACTTTTAATTGAAAACAAAAGGGTACCTTGAACTTCAGCTTCTTTGTTGTTGAATTGAATGTCAAAATCCATGGCTCCACACTCACGTCAATGCCTGCGGGAGCTTGAATGCGGGCTACATAAATGGAGTTCACTGGACCCACATTTGTAACGGTTCTTGAGACGGGCATACCTTGCTTAAGCTCGGGTAATGTTATAAAAGGGAAATTTAGATTTCGGAGGAACTTGACTGATTTATGACATGGGGGGGGAACCCTAATCATTAACCTGATGGGAGTGCTGTTATAACCCATTGCATAAAGGAAGCAGACATAATCTGAGGGTTTAAT



gi|78326523|gb|DT546797.1|DT546797 EST1057437 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
GCCAACGCCTTTCGAGTAGAATCCCATCAAATTTCTCATCAACCAAACAGAAATCTCATCCCCCTACAACCCCACTTCTCTTTCCAAATTAGATAGAAAGAAGGTGAGGGATTAACATTGATAGAGGTAGAAAGAGAGTTCTTCTTTGATCTTGCGAAGGATGTCTGCGGCAGTGTGCGGGAGCAAGAGATCTTTCTTCTAGGATATCCCGTCATCGCCATCGGCTTCTGTCTCTAAGAAGCTCCGGCGCTGCTCGCCTTCGTCTCCTTCTTCTGTTCGTTTTGCTCCGCCGCCTTCTCTCCTTGATCACCTCCAAGCTCTCTTCCCTCATATGGACCCCGAGCTTCAGGAGAGAGCACTACTTGAATGTGGCAACAATATAGACACTGCTAGCAAGAGGCTTCAGGAACTTCACTTAGGAGCTGCAGATGCTACAGGGGAAAAGATGGGTCCTGTTGAGGAACTGGGTACAACTGCTGAGCAGGGTACAGTAACCAACAATGGAGAAGCTGCTGATACTACTGCTCAGATTCCATCGGCCCCTGAAACTCTGCCTGTTGATGGTGCAGAA



gi|164359433|gb|ES847096.1|ES847096 UFL_140_42 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|..||||||||| |||||| |
AGGCAAACCAACAACTCTTTT

EST sequence (targeted fragment marked with yellow):
AAAGAAAAATGGTTCTGCTAGAGAAACTTTGGGATGATGTAGTGGCCGGTCCTCAACCGGAACGTGGCCTTGGCCGGCTGAGGAAGATCACCACCACCCCACCCTTGTCCACCAAAGGTAAAAACAATTAGCTTTTGCATTTCATCATTTGTATTGTGGACATTTAAGTTTCACTCTGAAATTGAATCTTTTCATTAGATGAGGCTTCATCAATGGCGATGCCGACGAGTCCGACGACACCTGGGACACCATCGACGCCGGTGTCGGCTCGTAGGGACAACGTGTGGAGGAGCGTGTTCAATCCAGGTAGCAACCTTGCAACCAAAGGTATTGGCGCTGAAGTTTTCGACAAGCCTCAACCTAACTCTCCTACTGTTTATGACTGGTTCGTACAGATTTTTTTTCTTGTTCAGTTATTTGCATGCATGCTAGCTTGGATAATTGGATATATATAAGTGGGACTTTGATTTTGCTTTTTGGATGTTTGTGATCCCCATCTGTTTGGTTGCTGAGAAAATTAATCATAGAAGAGTCATATATATATATTAACCAGGTGTTTTGGAATTTGGATTCTTTTTAATATATAGTACTAAAATGAAGAGTTTTTCAAAAAGGAAGCCTCAAAAACTTTCCTGTTTGTTTTTTTTTTTCCTTAACGTTTTCTCAACAACCAAACGGAGGCTCAGAGACAAATCATGCCGGAAAAACTTGGCTCTTTGGTTTGGAAGCTGCCTTGGAAAAAACAGTAATGCTGGAAATTATTAAAATAAACTCCTTTTAAAAACTTTTTTCTTTTTTAATTTAATTCCTTGGTCCAATTTTACCTAAAAAA



gi|73861157|gb|DT463896.1|DT463896 GH_CHX14H10.r GH_CHX Gossypium hirsutum cDNA clone GH_CHX14H10 3', mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|||.|||||||| .||||| |
AAATAAACCAACAGCTCTTTT

EST sequence (targeted fragment marked with yellow):
ATGTCCGTCCAAAATGTCGATGCAGAAAATCTGCCGGCGGCCGGGAGAGTGACGGCAGCTCCGGAAGCGAGGGAACTCAGTAAGCCAGCTAACAAGCCATGCACGTGAAATAACGGGAGCACAATGACCGTCGAGTCTGACTCAGTGAGTTCGTAAACCGATTTAATGTTCAAAACTGAAGTCCCCAAATTGAGCTGAGTCAAAGGAACACCCTTGGGACGACTGGTGGTACCGGAAGTGTGAAGGAAAAGAGAGACGTCAGCAGGGTCGTTAACGAGTTGGTTGACTGAGTCAATATTTGACTCGGGTTGGAGGAGAGAGGAATTTTGGAATTTTCATCCTGGAGAGCGGCGGATACGAGAGGGATGTTCAATTTGGAAGCGGCGGCTTCAGCCGGCTTGATGCCTTCGGCTGGGATTAATAACAGCTTGGATTCTGAATCAGAAAGGTAAAACTCAAACTCCTCGGCAGTATAAGCTGAGTTTAAAGGCGCGGCGGTTGCACGGCAACGAATTACAGCCAAGAACATAATAACAAGCTCCACAGTGTTTGGGAAAGTAAGAGCGACGACATCGCCGGGATGGATGCCGGAGGCGATGAGGAGAGAAGCAGCATGATCGATGATATGTTGTAATTGAGCATGCGTCAAATCGAATTTGCCGGAAACTGATAAAGCTCGCCTGGCAGGGAACTCGGCCGCAGCCTTGTGAAGTAATCCTGTCAAAGTTACAGTTTCCATATTCTTTTTTTCTTTTCTCGACAACCAAATAAAGGGTGAAAATATTGGTCGAGGCGGCCGC



gi|164362699|gb|EV486033.1|EV486033 092E07 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
GAATCCCATCGGTTTCTCATCAACCAAACAGAAAATTTCAGTCTACAATTCGAATTTTCGTTTTCTAAGTTAAAATAGAAGGGGAGTGAGGGATTGAGACTGATAGCGATAAGGAGATACTGTTTTTTTATTTGATTTAGCGAAGGATGTCTGCGGCAGTGTGCGGGAGCAAGAGATCGTTCTTCGAAGATATCCCGTCACCGCCATCGGCTTCTTCCTCTAAGAAGCTCCGGCGCTGCTCGCCGTCGTCTCCTTCTTCTGTTCGTTTCTCTCCGTCGCCATCTGCTCTCAATCACCTCCAATCTATCTTCCCTCACATGGACCCCCAGCTTCTGGAGCAAGCGCTATTAGAATGTGGCAATGATATAGACACTGCCATCAAGAAGCTGGAGGATCTTTGCTTAGGAGCAGCAGAGGCTAGAGGGGGAAAGACTTGTACCGTTGAGGAACTGGGCACAACTGCTGAGCAGGGTATATTGACTAA



gi|109853270|gb|DW482249.1|DW482249 GH_RMIRS_035_D03_025_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA

TTTGTTTGGTTGCTGAGAACA
|.|||||||||.|.||||| |
AGACAAACCAATGGCTCTTTT

EST sequence (targeted fragment marked with yellow):
ACAACTGCCTTGGTTACAGTGAAAACCAAAACTTCCATTTTCTCGTCCTTTTTTCTCGGTAACCAAACAGATTTTAATCTTCCTCCCTTACCCTAGATTTTCTCAAATTCGATCTTCGTATTGTAAAAAAGATCGAAAAAATGGGAAAAGGAGGGGAAAATTATGGAAAACGAGAGTTTGTCAACTCTAAACCAACAGATCCAGATGTGTTCCCCGCTTGGGCCAAAGATATCCGTGAATGCGAGAAGCATTACGATGTTAGTCGGAAATCGGGACTATCAACGGCGGAAGTTGAGAATCGGCGCAAGATCTATGGAAATAACGAGTTGGAAAAGCATGAAGGGCAGTCAATATGGAGTTTAATCATGGAACAATTTAACGACACTTTAGTTCGAATCTTATTGCTGGCGGCGGTTGTTTCTTTTGTGCTCGCTTGGTATGACGGTGACGAAGGCGGTGAAATGGAAATTACGGCGTTCGTTGAACCGTTGGTGATTTTTCTGATCTTGATCGTGAACGCGATCGTGGGCGTTTGGCAAGAAAATAACGCGGAGAAAGCGTTGGAAGCTTTGAAAGAGATCCAATCGGAGCAAGCTACGGTGATTCGTGATGGAATCAAAATACCTAGTTTGCCCGCCAAAGAGCTTGTTCCTGGTGATATTGTGGAACTCAAAGTANGGGATATTTGTCTCGTCCTCTGCCTGATG



gi|193219699|gb|EY197951.1|EY197951 BC_009_75 Cotton ovule and fiber 3-5 days post anthesis Gossypium hirsutum cDNA, mRNA sequen

TTTGTTTGGTTGCTGAGAACA
.|||||| ||||||||||| |
GAACAAAACAACGACTCTT-T

EST sequence (targeted fragment marked with yellow):
AACATGGGGAAGCTCGCGGCGCCCNTGCAGGTCGACANCTAGTGGGATCCAAAGAATTCGGCACGAGCTCGTGCCGCTCGAGTTTTTTTTTTTTTTTTTTAAGACTAAATCCCGAACAAATTTAAATTTGTGAAAATTACAAAAAAATCTGTTGGGGATTTAATTTTATTCAATAAGGATCCATGAAAATTACAGCTCACCCAAAAAAACCCAGCTCTTTTGCTATACAGATTTTGATTCCAAATATCGTACATACAATAGATGTATATTTTACAAGAAACAAATTAAATCTCCGGGCCGGAGCTCCTACACCGTTTCTCGCCGATTCTTTCACTTTCTCAGCAACAAAACAAGTGTTTCCCATCAAGAATCCAATACAAATGGAGTTTGCAAAAGATCATAAGGCGCCCATAAAGCATCCAAAGGACAAGGCCTATTAGCATCAAGCCTTGCCCATGGCTTCCCTTTACCACTCCAATGTAAAAGACTAACCGGACCAGGATGTAAATTCCGACATAAACCTCGGAAATTGTCTCCGCCGAGGCCATGTTGGTTCCACCGATGATCGACCGGCACTATGTTCCCGGCAAAAACCAATAAAAATGGTGGCAATGAACCTAATTCATAGATCCTCATCTGCTTTTGAATTTCCATCCATTCTTCGATTTTCGTTGTGTAATCTCCGTTTCTCCATCGATCGAGGTCCATTACCATTACACCGGTGTTAAAATAACATGGTTTACGGTTCGCGAACGTTAAATATAATGAAGGGTTCGACCAGAATGTCGTGGTGAAGTAAGAAGTGAAGTTTGCATTGCAATATTGTGGTGCGGCTAACACCGAGTTGTCTCCGAGTGGTGTAGCGGCGAGTTTAGCTATGTCGTCGACAAGGATTAAGTCCGAGTCGAGGTACACGACTCGGGTGACACATAAAGGGAGAAGGTTAGCTAAGTAGCTTCGA



gi|109876883|gb|DW505857.1|DW505857 GH_TMIRS_098_A01_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTTGTTTGGTTGCTGAGAACA
||||||||||||||||||| |
AAACAAACCAACGACTCTTTT

EST sequence (targeted fragment marked with yellow):
ATCATTTTCCCATCGATTTTCTCAGCAACCAAACAAAACCTTCCATTGTCTTCTAGAACTATCCAAGCACACTGGTATTAATCAATGGCTCGTACAAAGCAAACAGCCAGGAAATCAACCGGTGGAAAAGCTCCACGTAAGCAATTGGCGACCAAAGCCGCGAGGAAATCAGCTCCAGCCACCGGAGGAGTGAAGAAGCCTCACCGTTTCAGGCCAGGAACAGTGGCGTTGAGAGAAATCAGGAAGTACCAGAAGAGTACCGAGCTTTTGATCCGTAAACTTCCGTTCCAAAGGCTAGTGAGGGAAATCGCTCAAGATTTCAAGACGGATCTGAGATTCCAAAGTAGTGCGGTGGCGGCTTTACAAGAAGCGGCGGAAGCGTATCTGGTTGGCCTGTTTGAGGATACTAATCTCTGTGCTATTCATGCCAAGAGGGTTACTATTATGCCTAAAGATATTCAACTGGCTCGGAGGATTAGAGGAGAGAGAGCTTAAATGATGTATATGATGATTTGCTTTGAATGCTTTCTGCTTTTAGAATCTGTGTTGTTAGGTTTTCTCTAGATGTAGATCTCTCAGTTTAGTGGCTTGTGTTCAGTGATTGATGAAATGAAAGTTTGGAAAGCTCTAATTAGGAGTAG



gi|164270496|gb|ES849013.1|ES849013 UFL_654_51 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
||.||.|||||||||.|| |
CAATAAGCCAACGACTTTTTT

EST sequence (targeted fragment marked with yellow):
GGCACGAGGATAAGAGCAAGATTGATAAGAATAAAGGTGATAAAGGAGGGTTCATGTCAATGGGCTCTGGAAGAATTGAAAGTAGCTTTAGTGATATGAGCATTTCTAGCAGTGGAAGTGGCTTTGGAAGTAGTTCTGGGTTGGGATTAACAACTGATGTTGATTCCTTCTCTACCAAGTCTAAAGGCCGCCAACTGTCATCTGCAACCGCCCCTCCTAAAGGTCTTGGCATGCAGCTTGGTAAATCACAAAAAACAAACCAGTTCTTGGAATCTCTGAAAGCAGAAGGTGAACTGATAGTTGAAGATGTGCAGCCAAGGGCAGGCCAGGCCAGAGTGGCTGCAGCTGCACCTACTGATCCCATCACTTTGACTGCTGAGGAGAAACTCAATGTCACTTTGAAAAGAGATGGTGGGATAAGTAACTTTGATGTTCAAGGAACTTTGTCTCTTCAAATTCTTAACCAGGAAGATGCCCTCATCCAAGTTCAGATTGAAACTGGGGGTAATCCTGGCATTCTTTTCAAGACGCATCCCAACATGAACAAGGAGTTATTTTCCAATGAGAACATTCTAGGGTTGAAGGACCCTAATAGGCCTTTCCCCACTGGTTCTGCTGGGGATGCAGCTGGTGTTGGTCTCTTGAAATGGAGAATGCAAAGTGCAGATGAGTCAATGGTTCCATTGACCATCAACTGTTGGCCTTCGGTTTCTGGAAATGAAACTTATGTTAGCATTGAATATGAAGCTTCTGCCATGTTTGATCTGCGAAACGTTGTGATTTATGTACCTCTCCCAGCTCTTCGGGAGGCCCCAAATGTTAGGCAGATTGATGGTGAATGGAGATATGACTCCAGAAATTCTGTCTTAGAATGGTCCATACTTCTCATTGATAACTCTAACGGCAGTGGATCAATGGAAGTTTGTTGGGCCTCCCAGCAATTCATCTTTGGTTCTTTCCCCATTTCTGGTCCGTTTTTTCAGCAACCGAATAACATACAGTGGGCCCTGAAAGGGTTGGTGAACATTCATTTCCCCCTGGAAAAGGGCGGGGGGGAGCCTCCCCCCCCCCCGAAATTTCTTCCCACGCGGGAACAAAATTTTGAATTACCAGAAAAAATTTAATCCAAGTTTTGTGGGGAAGGAAACGGAATGGGAAAAAAAAAGAGGGGAAAAAAGTTTTCTTCCCGGGGCAATTTCCCCCCCGGCGAAAGAAACACCCTTCCACATCTTCTAGAAGAATTCACAAAAAAACAAACCCGCTTGGCCACCCCCTTTTTTTTCTTTTGTGGCCACCTTTCTCTAACAAAAAA



gi|78339941|gb|DT560215.1|DT560215 EST1070855 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
GTTTCAATCTATTCCCTTTCTTCTCCAACCAGTCCACAACCACTGTATAAAGAAACCCCTCACATTTTAAGCCAAACCTAAGTCCGAATTTGAATCCCATCAGTTTCTCATCAACCAAACAGAAAATTTCAGTCTAAAATTCGAATTGTCGTTTTCTAAGTTAAAATAGAAGGGGAGTGAGGGATTGAGACTGATAGCGATAAGGAGATACTGTTTTTTATTTGATTTAGCGAAGGATGTCTGCGGCAGTGTGCGGGAGCAAGAGATCGTTCTTCGAAGATATCCCGTCACCGCCATCGGCTTCTTCCTCTAAGAAGCTTCGGCGCTGCTCGCCGTCGTCTCCTTCTTCTGTTCGTTTATCTCCGTCGCCATCTGCTCTCAATCACCTCCAGTCTATCTTCCCTCACATGGACCCCCAGCTTCTGGAGCAAGCGCTATTAGAATGTGGCAATGATATAGACACTGCCATCAAGAAGCTGGAGGATCTTTGCTTAGGAGCAGCAGAGGCTAGAGGGGGAAAGACTTGTACCGTTGAGGAACTGGGCACAACTACTGAGCAGGGTATATTGACTAATAATGGAGAAGCTGCTGCTGCTGCTGCTGCTGTGACTATTCAGAATCCATCAGCCTCTGAAAATATGCCTGCTGATGGTGCTGAATGGGTGGACTTGTTTGTGAGGGAGATGATGAGTGCTACAAGTGTGGATGATGCCAAATCCCATGTCTCTAAATTGCTTGCAGTTTTGGAGAATTCCATAAGTAAATGTGTTGCAGAAGAGACGGTACAAAATTTTCAAAAGGAAAATCTCATGTTAAAGGGACAAATTGAAGCGATGATTCAAGAAAATACAGTCCTCAAACGTGCAGTGGCAATCCAACATGAACGACAAAAGGAGTATCAAGATAAAAACCAAGAGTTAGAACATTTAAAGCAATTGGTGTC



gi|109842352|gb|DW240912.1|DW240912 GH_TS_1-03-01_D07_LibSeq2_25Nov03_057 Stem - 3-5 weeks after planting Gossypium hirsutum cDN

TTTGTTTGGTTGCTGAGAACA
|..|||||||||||||||| |
AGGCAAACCAACGACTCTTTT

EST sequence (targeted fragment marked with yellow):
TGAAGAAAGAAAATGGTTCTGCTAGAGAAACTTTGGGATGATGTAGTGGCCGGTCCTCAACCGGAACGTGGCCTTGGCCGGCTGAGGAAGATCACCACCACCCCACCCTTGTCCACCAAAGATGAGGCTTCATCAATGGCGATGCCGACGAGTCCGACGACACCTGGGACACCATCGACGCCGGTGTCGGCTCGTAGGGACAACGTGTGGAGGAGCGTGTTCAATCCAGGTAGCAACCTTGCAACCAAAGGTATTGGCGCTGAAGTTTTCGACAAGCCTCAACCTAACTCTCCTACTGTTTATGACTGGTTCGTACAGATTTTTTTTCTTGTTCAGTTATTTGCATGCATGCTAGCTTGGATAATTGGATATATATAAGTGGGACTTTGATTTTGCTTTTTGGATGTTTGTGATCCCCATCTGTTTGGTTGCTGAGAAAATTAATCATAGAAGAGTCATATATATATATATTAACCAGGTGTTTTGGAATTTGGATTCTTTTTAATATATAGTACTAAAATGAAGAGTTTTTCAAAAAGGAAGCCTCAAAACCCTAACGTTTTCTCAGCAACCAAACGGAGGCTCAGAGACAGATCATGCCGGAAAACTTGGCTCTTTGTTTGGTAGCTGCGTGGAAATAACAGTATGCTGTAATTATTACATTAATCCATTTATAAGCTTTTCTTTTTAATTATTCTTGTCAATTTACTATAAGATGATAAATAACCAAAGATTAATAATTAGTGTAATTTGCATGGATCTAATTTCTGGGTGTTAACTAAAATTTAAGAAGAAAGTTTGGTCCGGATGGGATGGGATGCANGCTTTACAGCGGGGAGACCCGGAGCAAGCATCACCGT



gi|164309148|gb|ES818888.1|ES818888 UFL_264_92 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
| ||||||||| ||||||| |
ACACAAACCAAAGACTCTTTT

EST sequence (targeted fragment marked with yellow):
GGCACGAGAAGCAATTTTCTACCCTTTATTTCTTCCGTTTTGTTTTTTCTCAGAAACCAAACACAGAAGGGAGAAAACCCAGAAAGAAAGAGCAAACAACAGAGAACTTCGATTGGTTCTGCTCTGGAGAAAGTGAAAGTTTTTGCTGGTTTTGAAAGACAAAAAAGGAGAGATGGGTGATAAAGATGACGGTTTGGGGTTAAGTTTGAGCTTGGGATGTGCTCGGAATCAGCCCTCGTTGAAGCTAAATCTCATGCCTTTAGCTTCACCTTGCATGCAAAACCTTCAGCAGAGGAACATTTGGAATGAACTGTTTCAGTCTTCTGATGGACAGTTGGAAACAAGATCAGTTGCTGGTGGAATTGATGTGAACCAGGCACCGGCCTTGGCTGAATGCGAGGAAGAAGATGGGGTCTCCTCGCCTAACAGCACCGTTTCAAGCATAGGTGGAAAGAGAAACGAGAGAGACCCTGTGTGCGATGAAACCGAGGCTGAGAGACCGTCTTGCTCTCGTTCCAGTGACGATGAAGATGGCGGGGGTGCTGGTGACGATGCCTCGGGGAGAAACTTAAGCTTTCAAAGGAACAGTCGTTGGGGCTGGAAAAACTTCAAGGGAAAAAGACCTTTATCCAAACAAAATTGGGATTGGGAGGGATTGGACTTGAAGGCCAGGCAAGGGAGGTGGTTTCCGACCCAAAAACAAGGGGCAAGGTAAGCAGGGGAGTTGAGGGGGATGCTAAAAAATGTTGCGACATCTAAAGAAGAAACAGAAGGTTCAAAGGGGGGCAGAGCTTAAACAATAAAATCTCCCAAAGTTGACCCCAATTAACCTCCACAACCCTACCTGGGGCCTCTTGGAAAGTGGGCTGTGGTTTTTTTCGCTTCACCTGGCGGTTCCTCGCCCCAATAAAAAACAAAGGCGGGACC



gi|84173565|gb|DR462213.1|DR462213 CM105F01 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||.||.|||| |
AGACAAACCAATGATTCTTTT

EST sequence (targeted fragment marked with yellow):
GAACTATGATCCAAGAATCGCCGAGTGGAGATGAGCTTGATATTGAAAGAGCTTGTTCTCGTGGCATCAGTGATGAGGAAGATGGTGACGCTTCGAGAAAAAAACTTAGGCTTTCGAAGGATCAGTCTGCTATTCTTGAAGAAAGCTTTAAAGAAAACAACACTCTGAACCCAGTAAGTAATTCCAACGCAAGCTTTGATGTTATAATATAACTGTTTTCTTAGTAACCAAACAGAAAATATTTGGAGTGGTTTTTTTGGTAAATAAGCTAATAAAACGATGGCTGTTTTGTATCTTTACAGAAACAAAAGATGGCTTTGGCTAAGCAGCTGGGATTGCGACCCAGACAAGTTGAAGTTTGGTTCCAAAACAGAAGGGCGAGGTAGAACGATTTGCCTTGTTAGTAAATTTACTGTTATGTCCTTCTGGTGTAACATTATTTACTAAATACTGGACTTCTTAAAATTCTTTTTGCAGGACCAAGCTGAAGCAAACTGAGGTTGACTGTGAGTTCCTAAAGAGATGCTGTGAGAATCTGACGGAGGAAAACAGGCGGTTGCAGAAGGAAGTTCAGGAGCTGAGAGCACTGAAACTTTCTCCTCAGTTCTACATGCAAATGACCCCAACTACGAACCTCANCATGTGCCCATCGTGTGAGAGAGTACGTGCCTCATCCACCGGTTGATTCCAGATCCCATTCTTCAGTATCCCAGAAACCACACAGGACACTCCCATCAACCATTGGGTCTCGGTGTTGCCACATACCTATTGGACGCGTGATGCTCTCAGGTTCATCGGATTTTCACCACTGTCTCGGGTTTTGTTCTTTTATACACANCACTTCGTGTTTTGTGGCGGCGCGCGTTCTTCTGCCGGGGAGGAAGTTAAAGCCTAAGGAAAGAGG



gi|109890555|gb|DW519519.1|DW519519 GH_TMIRS_231_F11_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTTGTTTGGTTGCTGAGAACA
||||||||.|| ||| ||| |
AAACAAACTAAAGACCCTTTT

EST sequence (targeted fragment marked with yellow):
AGATCTCAATTCCTGTTATCTTTTCCCGTTTTCCCAGAAATCAAACAAAAGGAAATTTTGTGTAAAATCGACATCTGGAATATGGGTTTCTTGGTAACAACCCTGATTTTTGCTGTAATTGGGATAATTGCATCGCTTTGTACCAGAATCTGCTGTAACAGAGGTCCCTCTGCTAATCTGCTCCACCTAACACTGGTCATTACAGCAACGGTCTGTTGTTGGATGATGTGGGCAATTGTATATCTTGCACAAATGAAACCACTCATTGTCCCCATTTTGAGTGAAGGAGAGTGAAATTCTTCGCACGAGATCATTTGCGAGGTTATCGGTAAACAAGCTGTAGTCATATTTGATTGTGGATTAGCCTCTGAATTTAGTTGTCATGTAATATGTCTTTCTCATGTCGTTTCTGTAATTAAATCCTTATTCAAAGCTTGAACTTTGAATTGGTATTATGTTAGCAGTACTTCATTATTTGTTTCTCATTTGTTCAGTTTTTCATAAAAAATAGTGTTGTTTCCATTAGACATTATGCAGTTTTTGATGAAATAATATCGAAAAAAGATTACATTTATT



gi|164314271|gb|ES842959.1|ES842959 UFL_093_72 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|||||||||| ||||||| |
TAACAAACCAAAGACTCTTTT

EST sequence (targeted fragment marked with yellow):
CGCGCGTGCAGGNTCGACACTAGNTGGGATCCAANNAGAATTCGGCACNGAGAAGAAACCCTATCTTTTCAATTTATACCGAAATTAGAAAAGACCCTTTTTCAGTGTTATTATTATTCCTCTTTTATCCCAAATTTATTTTCCAAATTTTGCTTTACCGCTTTATATCTGAGAGCAAGAACGGGGTTCTTTTTTGTTCCAAGATTTCTTGGTGTAAATCTTTTTATCTGGGGTCAGAACAGGATAGATTTTTAGGCATTATTGGTATGAGGTTGAGTTATCTGTTGGAAATGGAGGTCTCGGTAATTAGGAGTTCTTCACAGGCTAAAATCTCTAAAACAGAATAATGATGCGGGGATTGACTGTTTTGGTTTGGGAAAAGTAATGATAAAAACGAAATATTTTCTCAGAAACCAAACAATGATAGCTTTGATAGTCAAATTGCGAGGTATATAAAAGCTGGGCTCATATTTACGTTGATAGCTGTCCAGTCTGATCCCATTCGTGAATCCAAGTCGCCTGCAACTTCCAAATCTCTTGATAGGCTAAGATTATTTGTTGGTCTGCCTCTAAATGCGGTTTCCGATGGCAATTCGGTAAACCATGCCCGGGCAATTGGGGCGGGACTGAAAGCTTTGAAACTTTTGGGTGTAGAAGGTGTTGAATTGCCTGTCTGGTGGGG



gi|164328832|gb|ES824260.1|ES824260 UFL_393_29 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTTGTTTGGTTGCTGAGAACA
|.|||||||||| |||||| |
AGACAAACCAACTACTCTT-T

EST sequence (targeted fragment marked with yellow):
GGCACGAGGCCAAGTCAAAGCCAACGCCTTTCGAATAGAATCCCATCAAATTTCTCATCAACCAAACAGAAATCTCATCCCCCTACAACCCCACTTCTCTTTCCAAATTAGATAGAAAGAAGGTCAGGGATTAACATAGATAGAGGTAGAAAGAGAGTTCTTCTTTGATCTAGCGAAGGATGTCTGCGGCAGTGTGCGGTAGCAAGAGATCGTTCTTCGAGGATATCCCGTCATCGCCATCGGCTTCTGTCTCTAAGAAGCTCCGGCGCTGCTCGCCTTCATCTCCTTCTTCTGTTCGTTTTGCTCCGCCGCCTTCTCTCCTTGATCACCTCCAAGCTCTCTTCCCTCATATGGACCCCGAGCTTCTGGAGAGAGCACTACTTGAATGTGGCAACAATATAGACACTACTATCAAGAGGCTTCAAGAACTTCACTTAGGAGCTGCAGATGCTACAGGGGAAAAGATGGGTCCTGTTGAGGAACTGGGTACAACTGCTGAGCAGGGTACAGTAACCAACAATGGAGAAGCTGCTGATACTACTGCTCAGATTCCATCGGCCCCTGAAACTCTGCCTGTTGATGGTGCAGAATGGGTGGACTTGTTTGTGGGGGAGATGATGGGTGCTTCAAGTGTGGATGATGCCAAAGCCCGTGCCTCCTAATTGCTGGAGGTTCTGGAGAAGTCCATTAGTGAACATGTTGCCTAGGAGGCAGCACAAAGTTTCATAAGGAGAATATGATGTTGAAGGAACAGATTTCAGTGTTG



gi|72283083|gb|DT053801.1|DT053801 COT_FV_A04 Fiber and Ovule of Xu-142 Lambda Zap Express Library Gossypium hirsutum cDNA 3' si

TTTGTTTGGTTGCTGAGAACA
|.|||.|||||||..|||| |
AGACAGACCAACGGTTCTTTT

EST sequence (targeted fragment marked with yellow):
GAGCTCTAATCATCTGTTAACAATTTATTAACAAGTTGAAATCTTTTTAAACTATAGAGAACAGATACAGAGAGAGAAAACCTGTAGCTCAAAACCAGTAAATAAAAAGAGCAGGAAGGAACTCAACATAGCTAATTTGAGTCAAGTGAGTTGACTTCATGGCAAAACAAAAATGAAAACAACGAAAAAATCAAATTATAACGCCCAGTCCTTTTACATTTTCTTGGCAACCAGACAGATCAAAATGTACAAAATCTAACAACCAGCCCAAAAGCCGCAATTCACATTATCGAACAATTTAACAACTATTTTTATAAGAAATAACAATTTAACAATCAGGGAAACGAACGGGGAGGAAAGCCAACGAGAAACGAGAGAGACAGCGACAAAACAACCAGAAATGGCCATGGCGAATCCACAACCGCCAACCGCATACGTCGGTCCAAGAATGGTCAACTGGAATCCGGAATCCGCATAAGAACCGGCGATACAAAGCGGAGCTCATTGCGGTAACGCTCCCAGGTAAATATTCCCACATGAAAACCACACG