| mature miRNA: TTTTGGAACAGAGTGAGTATA species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|218498171|gb|FG949783.1|FG949783 MA_93-11_06678 Mature embryo cDNA Library of 93-11 Oryza sativa Indica Group cDNA 5', mRNA s TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): CTACCAGCGGATGCCATTGATCTATGTGAAGCTTTACATCTATCAGCTTTTCAGAGGGTTAGCTTATATTCATACTGTTCCAGGAGTCTGCCACAGGGATGTGAAACCACAAAATGTTTTGGTTGATCCTCTCACTCATCAAGTCAAGCTATGTGACTTTGGAAGTGCAAAGGTTCTGGTTCCTGGTGAACCGAACATATCATACATTTGCTCTCGCTATTATCGTGCTCCTGAGCTCATATTTGGTGCAACCGAGTATACAACTTCAATTGACATATGGTCAGCTGGATGCGTTCTTGCAGAGTTACTTCTTGGTCAGCCACTGTTTCCTGGAGAGAGTGCTGTTGACCAGCTAGTAGAGATAATCAAGGTTCTTGGTACTCCAACCCGTGAGGAAATACGATGCATGAACCCCAACTATACTGAGTTCAAATTTCCTCAGATTAAGGCTCATCCTTGGCACAAGATTTTCCACAAGAGAATGCCTCCAGAAGCCATAGA | |||||||||
gi|88553704|gb|CI483834.1|CI483834 CI483834 Oryza sativa (japonica cultivar-group) 2 weeks after flowering ear Oryza sativa Japo TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GAAATATTCAATAAAGCTTCAGTATTTTCATTCTTTTCCAAAGTAACAAAGCAAGATGACAAACATGTGTAAGAGTTCACCAGTATAAAAAACTGCAGGTGGCTCAACACAAGAACAAAAGCATCTAAGGAGCAACTAATGAATACATCACCGATACAGAGTCTTCTGTCAAAGCTGAATCTGGGACTTGGTCAAGTGGCCTGAAGTAAAAAAGGAAGGCTACTTGACCGCGAGAACCTTGGATGTCAAATGGAGGTAAATATGATAACGGAGAAAGAAGCTACACAGGAATGGAGCATCTGCAACACTAGTTGATATTTGCTTGCTGAACCCTGAAAGGAACTTTTAAATGCTACTCTTCTGTCATTTTTTTATTACTGTTGTTCACCAAAGAAAATAGA | |||||||||
gi|88556218|gb|CI486531.1|CI486531 CI486531 Oryza sativa (japonica cultivar-group) 15 days after pollination pistil Oryza sativa TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): CTTTTTTTTTTTTCATGAAGCAAACAGAGGTCTTATTATTATTGTCCATACGAAGATGGATGGAAATACAAGGTACTACATATTACCGCCTCACACGGAAACACATACTTATTTCTTATTCATCTTGACTAAAGTATAAGGTAAATCATAAAGCTTCAACACAGAAACACAGAAGAAAACTCTACTAAGACATGGTCGATGGATTAACCAGGATGCATCCTTCTTCAGTTCGTTGCTTATTTTGTATTCCTAGTATTGTCATGAAATTCATCTTCTGTCTTGTAGATCACTCAGGAAGATCTTTGTCAGGAAAAAGTAAGTCCTCATCCTTATGCTTGCTCTTTTCCAAAGACTCATTCAGCGGAATGTTTTCACCAACAATAGCATCTTGTGAAATAAAGTTTT | |||||||||
gi|88544555|gb|CI472663.1|CI472663 CI472663 Oryza sativa (japonica cultivar-group) 2 weeks after flowering ear Oryza sativa Japo TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GAAAATGCACTGTATTATCATCACTCTGTACCAAAAAAAAATGCCACAAATTCACATTGATTCGATCCCCTCCCTTCCCCTCTCGATCAAAAAGATCCTTTTTTGGGCCGCCTAACTCCTGAATATCAAATTAATCTCTCTTCCTCTTTTAATTATTAATATTCAATCAATCATTGAAAGTTGCCTAATGATGCCGTACCTGTCGCCATCGCCATTGCCGCCGGCGGCTGCTCGCCTCGCCTTCCAGTTCTCGTACTCGGGGTCATCGGTGGGCAGCTCATGGCGGCACAGCGGGCACGTGTTGCGGATGGCGAGCCACGGCAGGATGCAGCCGTCGTGGTAAAGGTGCGCGCAGGGCAGCCCTCCTGGCCCCGCTCGCCGGCCTCCATGCCG | |||||||||
gi|88285180|gb|CI504851.1|CI504851 CI504851 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTANATCTATGCACATCACTCCTCACTCGACCCTAGGCCGCTGAGACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGTCCGCTATGGATCAATAAATACAATGTCATCACTATTTTCACTCTANGTGTTCTCATTCTGTTCCAAAAGATTACAATATCTCGATTGGTTGGAGGGCGAGCCATGTCTACAGCTTTTGGTGTGATAAACTGCAGAGCAAAACTACAAAAAAATCAGCCTTGAGCAACAACAGA | |||||||||
gi|88532245|gb|CI461720.1|CI461720 CI461720 Oryza sativa (japonica cultivar-group) 20 days after pollination pistil Oryza sativa TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GTATTGCTAAATCAGCTATACAACTTATGAGAGCTTGATTATATCATGAAGCAAACAGAGGTCTTATTATTATTGTCCATACGAAGATGGATGGAAATACAAGGTACTACATATTACCGCCTCACACGGAAACACATACTTATTTCTTATTCATCTTGACTAAAGTATAAGGTAAATCATAAAGCTTCAACACAGAAACACAGAAGAAAACTCTACTAAGACATGGTCGATGGATTAACCAGGATGCATCCTTCTTCAGTTCGTTGCTTATTTTGTATTCCTAGTATTGTCATGAAATTCATCTTCTGTCTTGTAGATCACTCAGGAAGATCTTTGTCAGGAAAAAGTAAGTCCTCATCCTTATGCTTGCTCTTTTCCAAAGACTCATTCAGCGGAATGT | |||||||||
gi|88393184|gb|CI616668.1|CI616668 CI616668 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GTGTACTGGGAGGGAGGGAGTCTGTCTCAACCTGGATTTGCTCTGTTCCAAAATTCTCTCCTTTCTTTGTTCTTTCCTCCGCTGGTCCATAGCATTTGATGATCCAATCATACTCCAAGATCTGAAGAGAAGGAGGGATTGGGAAGAATCGCTCTGCAATGAGGCCGGAGACGCGGCTTGATTCAGCGGTGTTCCAGCTCACCCCCACCCGCACAAGGTGTGATTTAGTTGTGATAGCAATGGAGGGAAGGAGAAGATAGCCTCTGGTTTGCTGAACCCGTTCGTTGCACATCTCAAGGTTGCCCAACAACAGATTGGAAAGGGAGGGTACTCCATCACACTTGAGGTACACCCAGAGATTGATGAACCATGGTTTACAAGGGGCACCGTGGAGAGGTTTGTCCGTT | |||||||||
gi|88287928|gb|CI510208.1|CI510208 CI510208 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCCTGAGACCTCTCGCTGCCGNTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTACTCTCCACAGTCCGCTATGGATCAATAAATACAACGTCATCACTATTTTCACTCTACGTGTTCTCATTCTGTTCCAAAAGATTACAATATCTCGATTGGTTGGAGGGCGAGCNATGTCTACAGCTTTCGGTGTGATAAACTGCAGAGCAAAACTACAAAAAAATCAGCCTTGCAGCAAAACCGACGTAGAAGTACGAACAGCAGATCAGAACCACCTT | |||||||||
gi|88582554|gb|CI699972.1|CI699972 CI699972 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): TGAGTGAACAAATGTGGTTGCTTATTGTACTGATGCCATGACAGTCGTGAATAAATTAGTTGAATGTATGTGTTGATGATGGGGAGATTTCAAGAGACTCTTCTTGCATAAAGATCGGCGGANTCTTTCTGAGGGACANATTTTATCCGCCCACAATGCANATTGACACAGCCCTATATGCAATCTGTTCCACAAGAACCTCCACCTGTGTCTGACTTTGGTCAAAATTTTTGTCCTCAAATCTAATCATTTGAGAATCAACTATTGAGATTCACGTCAGGAACTCCTTTTATGTTCCCTCTATTGTCTTCAGCTCACTCCTTCCCCATTACCTCCAAAGTTTGCTTGAAAAACTATCATCATATGTGAACCTCGTATGGTGTG | |||||||||
gi|88515841|gb|CI443495.1|CI443495 CI443495 Oryza sativa (japonica cultivar-group) callus 100ppm ZnSO4 for 1week Oryza sativa Ja TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): CTCCACATTTAGTTATTTTTCTATAATGGATAGAAATCGGACCTCTATATTCTCCGCATTTAATCATTGACTGGATTATAAAAGTAATAACTCAGCACTAAAGAAGTAAAGATGATAGCAAACTATGTATAGTAGATGCTCCCTCTGTTCCATAATTCCAAGTTTGGGACAATAACACGATCTTCAAAATATATATGTTTGACTATGTTTTTTTAATAATAATATATATAATAAATTAACATATTTTTACTTTTATTATAATACTTTGTAAGATAAATCTATATATGTGTTGATTTAGGGTGTGTTTGCAAGAGCAAGTTCCCAACACTCTCCTCTCGTTTTCCGGGTGCACGCTTTTCAAACTGCTAAAAAGTGTGTTTTTTTTACAAAAAGTTTTTATACAAAAGTTATCAAAAAAATTCATATTGATCCATTTTTGAAAAAAAAATTAGTTAATACTTAATTAATCA | |||||||||
gi|88318888|gb|CI510683.1|CI510683 CI510683 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGAGACCTCTCGNCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTCGAACAACACCACAGTTAGTCTCCACAGCTCCGCTATGGATTAATAAATACAATGTCATCACTATTTTCACTCTACGTGTTCTCATTCTGTCCCAAAAGATTACAATATCTCGATTGGTTGGAGGGCGAGCCATGTCTACAGCCTTTTGGTGTGATAAACTGCAGAGCAAAACTACAAAAAAATCAGCCTTGAGCAACAACAGACGTAGAAGTACGAACAGCAGATCAGAACCANCTTTCCC | |||||||||
gi|88293339|gb|CI502922.1|CI502922 CI502922 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGAGACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGTCCGCTATGGATCAATAAATACAATGTCATCACTATTTTCACTCTACGTGTTCTCATTCTGTTCCAAAAGATTANAATATCTCGATTGGTTGGAGGGCGAGCCATGTCTACAGCTTTTGGTGTGATAAACTGCAGAGCAAAACTACAAAAAAATCAGCCTTGAGCAACAACAGACGTAGAAGTACGAAC | |||||||||
gi|29636486|gb|CB641495.1|CB641495 OSJNEb01C18.r OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb01C18 3', mRNA sequence TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GAGAAAAATCCCAGAGCTGAAGACGAAGGACATAAGGATTTGGACCTACAGAAAAACAACACCACCAAGAAGGACAAACCTGCTGCTGAACCAATAGTAGTCCCAATTGTGTTGAGGATGTCTGATTTTGATCACAAGGCATTGCTAGAGGAATGGACAGCCACCAGGGCTTCCAGGGATAATTGTCTTCCTCAGGATCATCGAAAGCTTATAAACACCCTTAAGCTTATTCAGGACTATCTTTGTTCTTTTGAGTCGCAGGGGTTGACCGTTGTTGACATTTCAGCGAACTCATTCCCTCAGACACTAGATTGGCTTCACAGCTATCTTTTTCAGTGCATCGAACGTGGCCTTTTGGCTGCATGTTCAGAAAGTCCCAAGCAAGGTGGGAGCTAACGGATACAGATGAGCGAGAGGGAAGCCCGCATTAGTCTTGCTTAACATATACTCACTCTGTTCCAAAATAAACCAACATTGTACGGATGTGCCACATCCTAATACATCTTGGACACAAGTACTAGTATGTGTCACATCGGGTTTATTTTGGGACAGAGGGAGTATGTCACATATATGATGCTTGTAAAATTGTGCTTTTAGTGGGTTGATAATCAGGAACTTGTGCGTTGCCGCCATCCATAAACGTTGGCAGTGGAAATGTAACCGAGTAGAGAACTCCATAGTTCGATAAAAACCTTTTAGAGCTGGAATAGGAAAAGGAAAATTAAAAAAAAAAGCTCAAAAAAGGGTTGCCACCC | |||||||||
gi|88289747|gb|CI525079.1|CI525079 CI525079 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): ACAACTTATGAGAGCTTGATTATATCATGAAGCAACAGAGGTCTTATTATTATTGTCCATACGAAGATGGATGGAAATACAAGGTACTACATATTACCGCCTCACACGGAAACACATACTTATTTCTTATTCATCTTGACTAAAGTATAAGGTAAATCATAAAGCTTCAACACAGAAACACAGAAGAAAACTCTACTAAGACATGGTCGATGGATTAACCAGGATGCATCCTTCTTCAGTTCGTTGCTTATTTTGTATTCCTAGTATTGTCATGAAATTCATCTTCTGTCTTGTAGATCACTCAGGAAGATCTTTGTCAGGAAAAAGTAAGTCCTCATCCTTATGCTTGCTCTTTTCCAAAGACTCATTCAGNGGA | |||||||||
gi|88566112|gb|CI496829.1|CI496829 CI496829 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTCTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGAGACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGTCCGCTATGGATCAATAAATACAATGTCATCACTATTTTCANTCTACGTGTTCTCATTCTGTTCCAAAAGATTACAATATCTCGATTGGTTGGAGGGCGAGCCATGTCTANAGCTTTTGGTGTGATAAACTGGCCAGCAAAACTAA | |||||||||
gi|33675956|gb|CF304195.1|CF304195 ABF1--04-F05.g1 ABF3-overexpressing transgenic rice lambda phage cDNA library (ABF1) Oryza sa TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCACGAGGGACCGCCGGCATCAGCGAGAAGAAGAAGGAGGAGGGCGGGGGCGACGCCGTGACGGGTCACATCATCTCCACCACCATCGGCGGCAAGAACGGCGAGCCGAAGCGGACAATTAGTTATATGGCGGAGCGAGTTGTAGGAACTGGTTCTTTCGGGATTGTGTTCCAGGCTAAGTGCTTGGAGACGGGGGAAACGGTGGCCATCAAGAAGGTGTTGCAGGACCGGCGTTACAAGAACCGTGAACTGCAGCTTATGCGCGCAATGGAACACCCCAATGTCATCTGCCTGAAGCACTGCTTCTTCTCAACCACAAGCAGGGATGAGCTGTTCCTGAATCTTGTTATGGAGTACGTCCCTGAGACACTCTACCGTGTGCTCAAGCACTACAGCAATGCTAACCAGCGGATGCCATTGATCTATGTGAAGCTNTACATCTATCAGCTTTTCAGAGGGTTAGCTTATATTCATACTGTTCCAGGAGTCTGCCACAGGGATGTGAAACCACAAAAT | |||||||||
gi|88307848|gb|CI646283.1|CI646283 CI646283 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): TGGGAGGGAGGGAGTCTGTCTCAACCTGCATTTGCTCTGTTCCAAAATTCTCTCCTTTCTTTGTTCTTTCCTCCGCTGGTCCATAGCATCTGATGATCCAATCATACTCCAAGATCTGAAGAGAAGGAGGGATTGGGAAGAATCGCTCTGCAATGAGGCCGGAGACGCGGCTTGATTCAGCGGTGTTCCAGCTCACCCCCACCCGCACAAGGTGTGATTTAGTTGTGATAGCAAATGGACGGAAGGAGAAGATAGCCTCTGGTTTGCTGAACCCGTTCGTTGCACATCTCAAGGTTGCCCAACAACAGATTGCAAAGGGAGGGTACTCCATCACACTTGAGGTAGACCCAGAGATTGATGCACCATGGTTTACAAGGGGCA | |||||||||
gi|86482243|gb|CI124876.1|CI124876 CI124876 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): TTTTTTTGATTTGTAGTCCCCGGGAAGCCAGTTTGGGGACAACATCAAAATATTTCAGGTGCTTTACAACTGTCGCGGCCTTCGATGGATACGAGTACATTTGATCTTTTAACAGTGACTGCCACGGCTCAACCAACAACTAACTGCTGCCGAATCTAATTCAAGTTGGCCCATTAGCTGCTTCTGCGGTGGTGAGGTCAGCTGCTTTAGATTGAACTTTGCGAGCACTGTGTACCTCTCGATCACTCCAACCATACATATAATCTTCTCAATCTGCACAATAATAATCCTGTTTGGACTGTTAAGGTCAACCTTGTGAGGTTGAGGAACAGATTTGGATACTGCATTGATAATTTTCATCCTATTGATTCTTGTATTCGACCTTGCTTCATAAAACACACCAAAACTGCAAAGATTAAAATATCCAAGTAAAGAAGCATAATTTTAGCAAAATAACATGGGGAAAACTCAATTCACATTTTCTTAGTACTACAGTCAGCTCTTGCAACTTCCTGTATTTACTTGGCAATCGTGGTGTATGTCGCATATATTTTNGTATAGGGTGGATAAGGGGCATAAAATATTGTTTGGTCACCTCTACTCCCTCTGTTCCCAAATATAAACATTTCTAGGTTTTTAGCAGAGAT | |||||||||
gi|66914955|gb|CX101803.1|CX101803 RECm2776 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): TACTGCAGGCGTCGGAATTCCGGGTCGACCACGCGTCGCCCACGCGTCGCACCACCATCCCCCCGCAAAGCCAAGCACCAACGCTCAGCAGCAGCAGCCGCCTCCCTCCCCAGCTCAGCTCAGCTCCCCCCCGCATGGAGGCGCCGCCGGGGCCGGAGCCCATGGAGCTGGACGCGCCACCGCCCCCCGCCGCCGTGGCGGCGGCGGCGGCGACCGCCGGCATCAGCGAGAAGAAGAAGGAGGAGGGCGGGGGCGACGCCGTGACGGGTCACATCATCTCCACCACCATCGGCGGCAAGAACGGCGAGCCGAAGCGGACAATTAGTTATATGGCGGAGCGAGTTGTAGGAACTGGTTCTTTCGGGATTGTGTTCCAGGCTAAGTGCTTGGAGACGGGGGAAACGGTGGCCATCAAGAAGGTGTTGCAGGACCGGCGTTACAAGAACCGTGAACTGCAGCTTATGCGCGCAATGGAACACCCCAATGTCATCTGCCTGAAGCACTGCTTCTTCTCAACCACAAGCAGGGATGAGCTGTTCCTGAATCTTGTTATGGAGTACGTCCCTGAGACACTCTACCGTGTGCTCAAGCACTACAGCAATGCTAAACCAGCGGATGCCATTGATCTATGTGAAGCTTTACATCTATCAGCTTTCCAGAGGGTTAGCTTATATTCATACTGTTCCAGGAGTCTGCCACAGGCATGTTGAACCACAAATGTTTTGGTGATCCTCTCATCATAAGTCACCAGTGACTTGGACTGCACGTCCGGTCCGCGGACCACATTCAACTGGCCCGAATAGGGCCGGACCTATGGGCCGCGATATCCTGAATGCGCGAGAAGACCCAAACTGACACGTCTAAAGGTCCAAAAGTTGCCCGAGAAGCTCG | |||||||||
gi|33797165|gb|CF324447.1|CF324447 HDN--06-J01.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library II (HDN) Oryz TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCACGAGGCCACACCAAATTCAAGCATGTGCAGCAGTTTCTTGCTATGCTACCTGCACTTCTTACCCAAAGTTCTCTTTTCCAACATGTGAAGATCAATACCTAAGCGGATACAATGCAATATGCCGCCTGCAAAGGTGGGTTCATCTATAACCGTGGAACCAAGATGCACGTCGCCTCCTTGTACTTACCCTTTTCCAAAAAGCACGTGAACAAAAG | |||||||||
gi|88467769|gb|CI507194.1|CI507194 CI507194 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGACACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGTCCGCTATGGATCAATAAATACAATGTCATCACTATTTTCACTCTACGTGTTCTCATTCTGTTCCAAAAGATTACAATATCTCGATTGGTTGGAGGGGGAGCCATGTCTACCGCTTTTGGTGTGATAAACTGCAGAGCAAAACTACAAAAAAATCAGCCTTGAGCAACAACAGACGTAGAA | |||||||||
gi|33810254|gb|CF331018.1|CF331018 NACL--06-P15.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa Japonica Group cDNA clon TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): ATTTCATTGAATAATGCATGTCGCTTTAATAAATAAACTGTATTCTCTCTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTTTTTTTTCCCCTTCCCTACCGTTTTTTTAAAAAAAGGGGGAATTTTTTGGCCCCAAAAATAAATTCCCCCTTAAGGGGGGGGTTTTAAAATTCCCGGGCCCGGTTTTAAAAACCGGGGGAAGGGAAAAACCCGGGGGTTCCCCAAATTAAAGCCCTTGGAAAAAAACCCCCTTTTCCCAAGGGGGGAAAAAAAAAAAAGGCCCCCCCCAAACCCCCTTCCCAAAAATGGGCCCCCCTTTACCTCCGGGGTTTTAAGGGTTCCCCCCTAAAAAAAAAAACCCCTTTTCCCCTGTTGGGGGGTGCCCCAAGGGATTTTTTTGCCCCCCCGGGGCAAAGGGGGGGAACCCCCCTGGC | |||||||||
gi|29685168|gb|CB681443.1|CB681443 OSJNEf07L01.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf07L01 5', mRNA sequence TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): CTCAAATATTGCTCCTTTAAATGCTATTGGTGGGGAATCACACAAGTTTTTAAGGGTTGATGGTGGCCTGTCTTACCTGAAAAAGGCTCTACACATGTATCCCGACTGCAGTTTAGTAACAAACCAACTTGGATCTCTGCTACTGTCAAGTGAAGATTGGATGGCTTCTCATAAAGCACTAAGGGTTACTTCATTGTCCCGGGGATATACATCCAATAGGGGCTTAAGATCTCCACACCAAATTCAAGCATGTGCAACAGTTTCTTGCTATGCTACCTGCACTTCTTACCCAAAGTTCTCTTTTCCAACATGTGAATATCAATACCTAAGCGGATACAATGCAATATGCCACCTGCAAAGGTGGGTTCATCTATAACCGTGGAACCAAGATGCACTTCGCCTCCTTGTACTTACCCTTTTCCAAAAAACACGTGAAGAAAAGTATCCGAAACATATCTGCACCATTTTGAAGAGGCTGATTTTGCAAGTTCTCTCCAGTGGTAGCAATTCACAATACAATAAGGTGGTTCAGTATGGGAACTACTTGTTACTTCTTGTGGCTTCAGAGGTTACTTTGCAATCTGGTGACCATGGCAACTGTATTGCTCAAGCTACTGAAGCTCTTGGAGTAACTTCTTCTAGCGTGGATTCTTTCTTTGCACACTTGCAACTGTGTCCGGCCTATGTGATG | |||||||||
gi|88538110|gb|CI467110.1|CI467110 CI467110 Oryza sativa (japonica cultivar-group) 20 days after pollination pistil Oryza sativa TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): CTTTTTTTTTATCATGAAGCAAACAGAGGTCTTATTATTATTGTCCATACGAAGATGGATGGAAATACAAGGTACTACATATTACCGCCTCACACGGAAACACATACTTATTTCTTATTCATCTTGACTAAAGTATAAGGTAAATCATAAAGCTTCAACACAGAAACACAGAAGAAAACTCTACTAAGACATGGTCGATGGATTAACCAGGATGCATCCTTCTTCAGTTCGTTGCTTATTTTGTATTCCTAGTATTGTCATGAAATTCATCTTCTGTCTTGTAGATCACTCAGGAAGATCTTTGTCAGGAAAAAGTAAGTCCTCATCCTTATGCTTGCTCTTTTCCAAAGACTCATTCAGNGGAATGTTTTCACCAACAATAGCATCCTGTGAAATAAAGTTTTTCTGCTCCTGATGTACCTGGGGTATATCGGCC | |||||||||
gi|112786757|gb|EE591387.1|EE591387 NEW_RNG28-G02 Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, mRNA seq TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCAAGAACCTGGAGATGGAGTCTTATGCGCGCAATGCGAACACCCCAATGTCATCTGCCTGAAGCACTGCTTCTTCTCAACCACAAGCAGGGATGAGCTGTTCCTGAATCTTGTTATGGAGTACGTCCCTGAGACACTCTACCGTGTGCTCAAGCACTACAGCAATGCTAACCAGCGGATGCCATTGATCTATGTGAAGCTTTACATCTATCAGCTCTTCAGAGGGTTAGCTTATATTCATACTGTTCCAGGAGTCTGCCACAGGGATGTGAAACCACAAAATGTTTTGGTTGATCCTCTCACTCACCAAGTCAAGCTATGTGACTTTGGAAGTGCAAAGGTTCTGGTTCCTGGTGAACCGAACATATCATACATTTGCTCTCGCTATTATCGTGCTCCTGAGCTCATATTTGGTGCAACCGAGTATACAACTTCAATTGACATATGGTCAGCTGGATGCGTTCTTGCAGAGTTACTTCTTGGTCAGCCACTGTTTCCTGGAGAGAGTGCTGTTGACCAGCTAGTAGAGATAATCAAGGTTCTTGGTACTCCAACCCGTGAGGAAATACGATGCATGAACCCCAACTATACTGAGTTCAAATTTCCTCAGATTAAGGCTCATCCTTGGCACAAGATTTTCCACAAGAGAATGCCTCCAGAAGCCATAGACCTTGCTTCCCGTCTTCTCCAATATTCACCAAGTCTACGCTGCACTGCTCTTGACGCATGTGCACATTCCTTCTTTGATGAGCTACGAGAGCCCAATGCACGCCTGCCAAATGGTCGTCCATTCCCTCCTCTGTTCAACTTCAAGCATGAACTAGCCAGCGCCTCTCCAGAACTCATCCACAGGCTCATACCGGATCATATCAGACGGCAACATGGCCTCAACTTTGCGCATGCTGGGAGCTAAAGGGCACCGCGACGCCACCGTTTTGTTCGTTTATTTTTCCATGAGCTGGACATTGCAATCCTAGATGACTCCATTGTCCTGGACTTGGACTCCATGCTCCAGGTTCTTGCA | |||||||||
gi|88722999|gb|CI746509.1|CI746509 CI746509 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): TTTGGATCTCTGCTACTGTCAAGTGAAGATTGGATGGCTTCTCATAAAGCAGTAAGGGTTACTTCATTGTCCCGGGGATATACATCCAATAGGGGCTTAAGATCTCCACACCAAATTCAAGCATGTGCAGCAGTTTCTTGCTATGCTACCTGCACTTCTTACCCAAAGTTCTCTTTTCCAACATGTGAAGATCAATACCTAAGCGGATACAATGCAATATGCCGCCTGCAAAGGTGGGTTCATCTAGAACCGTGGAACCAAGATGCACGTCGCCTCCTTGTACTTACCCTTTTCCAAAAAGCACGTGAAGAAAAGTATCCGAAACATATCTGCACCATTTTGAAGAGGCTGATTTTGCAAGTTCTCTCCAGTGGTAGCAATTCACAAGACAATAA | |||||||||
gi|88665930|gb|CI716086.1|CI716086 CI716086 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCCGCTTCCTCCGCTCCATCCTCCTCCTTCTCCAAGCAGACGTAGGACCAAGGGCCTCATCTGATCTCACCAACTCCTTCTGCTGNTGCAACATCATCTTCTTTTCAATTTTTGTCAAGCAANTTTGCCTTCAGCTGCTGNTGCTGCTGCCATTCGATCCATGTANTACTACTACTAGATGCAACCATTAATCAGTCATCTGTGTTTGCTCTGCTCCAAAAAAAAAAAAAAAAATTCAT | |||||||||
gi|88727814|gb|CI749326.1|CI749326 CI749326 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): AATCCCAGTACTGGGAGGGAGGGAGTCTGTCTCAACCTGCATTTGCTCTGTTCCAAAATTCTCTCCTTTCTTTGTTCTTTCCTCCGCTGGTCCATAGCATCTGATGATCCAATCATACTCCAAGATCTGAAGAGAAGGAGGGATTGGGAAGAATCGCTCTGCAATGAGGCCGGAGACGCGGCTTGATTCAGCGGTGTTCCAGCTCACCCCCACCCGCACAAGGTGTGATTTAGTTGTGATAGCAAATGGACGGAAGGAGAAGATAGCCCTCTGGTTTGCTGAACCCGTTCGTTGCACATCTCAAGGTTGCCCAACAACAGATTGCAAAGGGAGGGTACTCCATCACACTTGAGGTAA | |||||||||
gi|86539647|gb|CI179853.1|CI179853 CI179853 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): TGACTTGAAAATGCACTGTATTATCATCACTCTGTACCAAAAAAAAATGCCACAAATTCACATTGATTCGATCCCCTCCCTTCCCCTCTCGATCAAAAAGATCCTTTTTTGGGCCGCCTAACTCCTGAATATCAAATTAATCTCTCTTCCTCTTTTAATTATTAATATTCAATCAATCATTGAAAGTTGCCTAATGATGCCGTACCTGTCGCCATCGCCATTGCCGCCGGCGGCTGCTCGCCTCGCCTTCCAGTTCTCGTACTCGGGGTCATCGGTGGGCAGCTCATGGCGGCACAGCGGGCACGTGTTGCGGATGGCGAGCCACGGCAGGATGCAGCCGTCGTGGTAGAGGTGCGCGCAGGGCAGCCTCCTGGCCCGCTCGCCGGCCTCCATGCCGTCCTTGCACACCGCGCACTGCGTGTCGCCGCGGGCCGCGTCGACGACCACGGTCGGGAGGCTCTCCACGGCGGCCTTCGCCGCCGCGCGCGCGCCCTTGGAGG | |||||||||
gi|58661958|gb|CK050638.1|CK050638 47935rsiceh_17229.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCACGAGGGCTCAGCTCAGCTCCCCCCCGCATGGAGGCGCCGCCGGGGCCGGAGCCCATGGAGCTGGACGCGCCACCGCCCCCCGCCGCCGTGGCGGCGGCGGCGGCGACCGCCGGCATCAGCGAGAAGAAGAAGGAGGAGGGCGGGGGCGACGCCGTGACGGGTCACATCATCTCCACCACCATCGGCGGCAAGAACGGCGAGCCGAAGCGGACAATTAGTTATATGGCGGAGCGAGTTGTAGGAACTGGTTCTTTCGGGATTGTGTTCCAGGCTAAGTGCTTGGAGACGGGGGAAACGGTGGCCATCAAGAAGGTGTTGCAGGACCGGCGTTACAAGAACCGTGAACTGCAGCTTATGCGCGCAATGGAACACCCCAATGTCATCTGCCTGAAGCACTGCTTCTTCTCAACCACAAGCAGGGATGAGCTGTTCCTGAATCTTGTTATGGAGTACGTCCCTGAGACACTCTACCGTGTGCTCAAGCACTACAGCAATGCTAACCAGCGGATGCCATTGATCTATGTGAAGCTTTACATCTATCAGCTTTTCAGAGGGTTAGCTTATATTCATACTGTTCCAGGAGTC | |||||||||
gi|88285486|gb|CI507356.1|CI507356 CI507356 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGAGACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGTCCGCTATGGATCAATAAATACAATGTCATCACTATTTTCACTCTACGTGTTCTCATTCTGTTCCAAAAGATTACAATATCTCCATTGGTTGGAGGGCGAGCCATGTCTACAGCTTTTGGTGTGATAAACTGCAGAGCAAAACTACAAAAAAATCACCCTTGAGCAACAANAGAAGTAG | |||||||||
gi|3107813|gb|D43553.1|D43553 D43553 Rice callus cDNA (H.Uchimiya) Oryza sativa cDNA clone SS584, mRNA sequence TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GTTCAGACAGCTCTCCTCTCCTCATACTTAGCTTCACTCTCTTCCAAAACCTACACTAACTTAAGTCTCCAAGAAGGCAAGAGTCGCCGTCGCCGTCGCCGCCGCCACTCCANGCGCTCGCTAGCTAGAGCTGTGCACGATACAATAAGATGANACCCTAGCCG | |||||||||
gi|88764810|gb|CI773928.1|CI773928 CI773928 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): TTGTATCATATATATGACAGATAGAGTAAACATTAAAATGCCACTATTGTACTCTCTCTGTCACATGTCAACTCGATATAATCTAATACTCCCTCTGTTCCTAAATATAAAAGATTTTGGTGAGATGTGACATATACTAATACAACGAATCTAAATAGACTTATGTCATATGAAACCAAAATCCCTTATATTTAGGGACGGAGGGAGTACTACATATATGGACAGATCTGTCTACATACATAGGCTATGTTTAGATCCAGGGGTGAAAAGTTTTAGTGTGTCACATCGGATATACGGACACACGTTTGAAGTATTAAACGTATACTAATAACAAAACAAATTACAAATTTGCTGTAAACTGCGAGACGAATTTATTAAGCCTAATT | |||||||||
gi|117246907|gb|CT843729.1|CT843729 CT843729 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): CTCGCATCGTCCTCTCCCCCGAACCCGCAGCCGCCAATCCACACGCCAGAAGCCGCGCCAGCTTCCAGAAGCTTCCCCAGGGGGAAGGTCGCTCTCACTCATGAGCGTCTGACCGGCCGTCGCCATGGGTTGCGCCGGATCCACACCTAAAACCGATGGTATCGTCGTTTTCCCTGTCTTTCTCGGTTTTTTGCTATCCGTGTTTTCGTTTTCGTTTTCGTTTTCTGGAATCTTAGATTGAGATCTTGGTAATTTGGTGCCAAGAACAGCAAATTAGGAGCTAACTGGTTTGTCACTTGGTTCTGGATCGACCGTGTTTGTAGTCGCCAAGTCAGGTTAGCTTAGCTAGCTATTGGATGTTTAGCGGTATGAAGGTCATGTAAGAATTCAGTTGTAGAATCATCAATTAGGTTGCAGGGTAGAGCGAATTACTGATAAAACGAATTACTTCGAGTAATTGTGGAATGCTGTTCCGTGTTGAGTTTTCTTATGTTGTACTCTCTCTCTTCCAAAATATAGCAACCTGTTACTCGATTAGATACCACCTAATAACTAGAGGGTCTATTTAGATTAGTAGTACTAGGTGGGAGTCTATCTAGATTCGTATAGTACTAGGTGGTGTCTACTCGAGTTTTAGGTTGCTATATTTTGCGATGAGGAGG | |||||||||
gi|29614535|gb|CB619548.1|CB619548 OSIIEa04C23.r OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa04C23 3', mRNA sequence TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCAAGGTGAGGCGGAATCAGGTTTGGAGCGGCTGCATCAATGTGCAGAGAAAGAACTTCAAGTATACCTTGAAGCAGAATCTCCCTCAAAAGATTTCAATGACTTCCGTACAAAGTTGGCTGGATTAACTAGTGTGACTCGCAATTATTTCGAGAACCTTGTCCGGGCTTTGGAGACTGGATTAAATGATGTAGGTCCTTCCACTAGCCATGGTACATGCAGCAAGAGCGCAACTTCGAAAAGTCTTGGCAGTAAAAGTAAGAGTAGCAAGAGCAGAGCATCCAGTACCAGCTCCAAAACAGGTGGCTCGAGCCGTGGTGTCGATGAAAGCAACATTTGGACGTGTGACCAGTGCACATATGCTAACCCCAGATCTGCCAGAAACTGCCAGGCTTGTAACAACCAGCATCGATAGCATTACATAGCTATGGTTTTAGATCTCGACTCCATTGGTTGAGAAACCTCTGGTTCAAACCTGGTGGTAAAGAACATATGCAAAGTTGAAGTTTTCAATGAACAGTGGAGCTGGCGTGAGGAGGTATTAGCAGAGAACTGTTGCATATGCAAATTAGATTTTCTCAACTCATCATGTGCTATGGCTGAGAAACCTCAGGTCATTCCCAATTTTTTTAATCAACTGACGGTATCCTTGAAGCCTCGCTCATCATCATCTAGTTCATCCTGTATATAACTCTATATCGATATCTGTAACTCTTGTGTTGTTCTATGGAAGTAGCGCGTACTAGCAGATGTGCGCCACCAATGAACTGAGTTGTTGTAATGATGTTGTAACCTTGTAATAATGAATTGGCCAATTCTCAAGGAAATTTATTCATCCTGTTCCAGAATGCAAAAAAG | |||||||||
gi|88568652|gb|CI499369.1|CI499369 CI499369 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTCTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGAGACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCCACGATGCTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGTCCGNTATGGATCAATAAATACAATGTCATCACTATTTTCACTCTACGTGTTCTCATTCTGTTCCAAAAGATTACAATATCTCGATTGGTTGGAGGGCGAGCCATGTCTACAGCTTTTGGTGTGATAAACTGCAGACCAAAACTACAAAAAAATTCAGCCTGAGCAACAACAGACGTAGAAGTACGAACAGCAGATCAGAACC | |||||||||
gi|88292895|gb|CI507673.1|CI507673 CI507673 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGAGACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTAGCTCTCCACAGTCCGNTATGGATCAATAAATACAATGTCATCACTATTTTCACCTCTACGTGTTCTCATTCTGTTCCAAAAGATTANAATATCTCGATTGGTTGGAGGGNGAGCCATGTCTACAGCTTTTGGTGTGATAAACTGCAGAGCAAAACTACAAAAAAATCAGCCTTGAGCAACAACAGACGTAGAAGTA | |||||||||
gi|88533583|gb|CI461158.1|CI461158 CI461158 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): CTTTTTTTGACCGACAGACACACGTACGTACGTACATGCATGTATTTTTTTAATACAATAAATTGGCAATGGCATGATCCAAAATGACAGACAGACACACATACACACGTACGTACGTACTCCCTCTGTTCCACAATGTAAGTCATTTTAATATTCCTCATATTTATATTGATGTTAATGAATCTAGACATATATATATCTATCTAGATTTATTAACATCAATATATATGTGGAAAATACTAAAATGACTTATATCCTGAAACGGAGGAAGGACATTATTATTTGTAGGGATTACAATCCATGGGCCCAAGAGGGGGTTCATTCATGAGCTGGCGAGGTACGTAGGAGAGCTTAACCTAAGCTGGTGTATGAACTCCTCNATGTACCTCTCATGGAGCTCCTCGCTGGNGAAAACCTCTCGCAGCTTGAGGGC | |||||||||
gi|88293020|gb|CI507798.1|CI507798 CI507798 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGNTGAGACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGTCCGCTATGGATCAATAAATACAATGTCATCACTATTTTCACCTCTACGTGTTCTCATTCTGTTCCAAAAGATTACAATATCTCGATTGGTTGGAGGGCGAGCCATGTCTACAGCTTTTGGTGTGATAAACTGCAGAGCAAAACTACAAAAAAATCAGCCTTGAGCAACAACAGACGTAGA | |||||||||
gi|88318564|gb|CI505968.1|CI505968 CI505968 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGAGACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGTCCGCTATGGATCAATAAATACAATGTCATCACTATTTCCACTCTACGTGTTCTCATTCTGTTCCAAAAGATTACAATATCTCGATTGGTTGGAGGGCGAGCCATGTCTACAGCTTTTGGTGTGATAAACTGCAGAGCAAAACTACAAAAAAATCAGCCTTGAGCAACA | |||||||||
gi|88230068|gb|CI229944.1|CI229944 CI229944 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GTATGTGACTGCACTCTCTCTGTCCCAAAATTTTATAGATGCATTTACAAAGTTACAATACTCATTACATGCAAATAACTGAAGGATGGCGAATGTATTTGTCTGGTATCTACCTGCTCTCCTAACTAGCGTGCCATCTCTCCTAGATGGTAACCATTGGATCAGGTTATACTTCTTATTGACCATTGTTCTCATACTATGCTGTCCAAGCTGCCGTTGCCGTCGTCGATGCCTTTGGTGTCCGAAAGCTGCTTCCGGCGGCTGCCACCCCTGATCGGCAGAAACGGCGCGCCGTCGCCGTCGTACTCCGACACCTTCCCGTCCACGGTGTTCTGGAGCGCCTGCTCGCACCTCAACAGAATCTGCAGAACGTCCCTCATTGTCGGCCTCGTCGCCGGCT | |||||||||
gi|29625197|gb|CB630208.1|CB630208 OSIIEb07A15.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb07A15 3', mRNA sequence TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): ACTGGTGTAAATCACTTTATCTTATTCTTACATTCTAATGGTGTTCAGTTGATTGTTTCTTTTGAATGTCGGGCAAGCCACTACACTGCCTGAGCCAGAGATAAAAGCATATGATGTGCTCCGGTACATTCATGCTGTAAAGGACACATTCCCAGACCAGCCCTAGAAGCTTGATGAGTCATCATAATTTTGCTTCATTTCAAGAGCAAGAGGTGGAATTACTCACGTATGTCGGGTACAAAATACATGAACATCCATGTAAAGATCATTTTCAGTGGGTAACAAGCCCAAGTGCCCAACTAGTATATGGAAAAATAAATTATCCAAATCTATGGATCATATGCACGATCAAGACTTCTGAAACGCCCTTGGAGAGCAGCTGTCCAATTGAAGATATTAATCGATTGAAACTGGAAGGTTATAGATGTGCAAAACATCGGGTTCTACTTCCTCTGTCCCAAAAAAAGTGAATCTAGAACGGGATGTGACATGTCCTAATACAACGAATCTAAACAATCCCATCCAGTATTAGGTTGTTTTTTTTTTGAGACGGAGGGAATCCATTAGTGGTTTAGAGTGTGTTTGAGTTCCAAGAATGTGTATATACCCAAAATAATGTGTTTTCCCCTATGAGAATGTCTGATAAATAGTGTGCTTCCCCCTGAGTGTGTCTCAGTTGCAAGAATATGTACGCAAAATAATGTGTTCTCCACTAAATCACTAACGTGTGTCTGAGTTGCAAGAATATGTCCGCAAAAAAAAAAAAAAAAGAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTGTCCC | |||||||||
gi|88562744|gb|CI493461.1|CI493461 CI493461 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTNTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGAGACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGTCCGNTATGGATCAATAAATACAATGTCATCACTATTTTCACTCTACGTGTTCTCATTCTGTTCCAAAAGATTCAAATATCTCGATTGGTTGGAGGGCGAGCCATGTCTACAGCTTTTGGTGTGATAAACTGCAGAGCAAAACTACAAAAAAATCAGCCTTGAGCAACAACAGACGTACAAGTANGAACAGCAGATCAGAACCACCTTTTC | |||||||||
gi|88285477|gb|CI507347.1|CI507347 CI507347 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGAGACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGTCCGCTATGGATCAATAAATACAATGTCATCANTATTTTCACTCTACGTGTTCTCATTCTGTTCCAAAAGATTACAATATCTCGATTGGTTGGAGGGCGAGCCATGTCTACAGCTTTTGGTGTGATAAACTGCAGAGCAAAACTACAAAAAAATCAGCCTTGAGCAACAACAGA | |||||||||
gi|88523817|gb|CI451673.1|CI451673 CI451673 Oryza sativa (japonica cultivar-group) 1 week after flowering ear Oryza sativa Japon TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): ATACAACTTATGACAGCTTGATTATATCATGAAGCAAACAGAGGTCTTATTATTATGGTCCATACGAAGATGGATGGAAATACAAGGTACTACATATTACCGCCTCACACGGAAACACATACTTATTTCTTATTCATCTTGACTAAAGTATAAGGTAAATCATAAAGCTTCAACACAGAAACACAGAAGAAAACTCTACTAAGACATGGTCGATGGATTAACCAGGATGCATCCTTCTTCAGTTCGTGGCTTATGTGGTATTCCTAGTATTGTCATGAAATTCATCTTCTGTCTTGTAGATCACTCAGGAAGATCTTTGTCAGGAAAAAGTAAGTGCTCATCCTTATGCTTGCTCTTTTCCAAAGACTCATTCAGCGGAATGTTTACACCAACAATAGCATCTTGTGAAATAAAG | |||||||||
gi|29681157|gb|CB677432.1|CB677432 OSJNEe14F22.r OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe14F22 3', mRNA sequence TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): CATCAATGTGCAGAGAAAGAACTTCAAGTATACCTTGAAGCAGAATCTCCCTCAAAAGATTTCAATGACTTCCGTACAAAGTTGGCTGGATTAACTAGTGTGACTCGCAATTATTTCGAGAACCTTGTCCGGGCTTTGGAGACTGGATTAAATGATGTAGGTCCTTCCACTAGCCATGGTACATGCAGCAAGAGCGCAACTTCGAAGAGTCTTGGCAGTAAAAGTAAGAGTAGCAAGAGCAGAGCATCCAGTACCAGCTCCAAAACAGGTGGCTCGAGCCGTGGTGTCGATGAAAGCAACATTTGGACGTGTGACCAGTGCACATATGCTAACCCCAGATCTGCCAGAAACTGCCAGGCTTGTAACAACCAGCATCGATAGCATTACATAGCTATGGTTTTAGATCTCGACTCCATTGGTTGAGAAACCTCTGGTTCAAACCTGGTGGTAAAGAACATATGCAAAGTTGAAGTTTTCAATGAACAGTGGAGCTGGCGTGAGGAGGTATTAGCAGAGAACTGTTGCCTATGCAAATTAGATTTTCTCAACTCATCATGTGCTATGGCTAAAAAACCTCAGGTCATTCCCAATTTTTTTAATCAACTGACGGTATCCTTGAAGCCTCGCTCATCATCATCTAGTTCATCCTGTATATAACTCTATATCGATATCTGTAACTCTTGTGTTGTTCTATGGAAGTAGCGCGTACTAGCAGATGTGCGCCACCAATGAACTGAGTTGTTGTAATGATGTTGTAACCTTGTAATAATGAATTGGCCAATTCTCAAGGAAATTTATTCATCCTGTTCCAAAAAAAAGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTGTCCCTTAGGAGGT | |||||||||
gi|218497032|gb|FG947605.1|FG947605 MA_93-11_04500 Mature embryo cDNA Library of 93-11 Oryza sativa Indica Group cDNA 5', mRNA s TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): CGAATCTATGAAGTCATGAGTGAAGTCCACTCAAATATTGCTCTTGGAAATGCTATTGGTGGGGAATCAGACAAGTTTTTAAGGGTTGATGGTGGCCTGTCTTACCTGAAAAAGGTTCTACACATGTATCCCGACTGCAGTTTAGTAAGAAACCAACTTGGATCTCTGCTACTGTCAAGTGAAGATTGGATGGCTTCTCATAAAGCAGTAAGGGTTACTTCATTGTCCCGGGGATATACATCCAATAGGGGCTTAAGATCTCCACACCAAATTCAAGCATGTGCAGCAGTTTCTTGCTATGCTACCTGCACTTCTTACCCAAAGTTCTCTTTTCCAACATGTGAAGATCAATACCTAAGCGGATACAATGCAATATGCCGCCTGCAAAGGTGGGTTCATCTAGAACCGTGGAACCAAGATGCACGTCGCCTCCTTGTACTTACCCTTTTCCAAAAAGCACGTGAAGAAAAGTATCCAAAACATATCTGCACCATTTTGAAGAGGCTGATTTTGCAAGTTCTC | |||||||||
gi|89176338|gb|CI043359.1|CI043359 CI043359 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): TTGGATGCGGCAACGCACAAGTTCCTGATTATCAACCCACTAAAAGCACAATTTTACAAGCATCATATATGTGACATACTCCCTCTGTCCCAAAATAAACCCGATGTGACACATACTAGTACTTGTGTCCAAGATGTATTAGGATGTGGCACATCCGTACAATGTTGGTTTATTTTGGAACAGAGTGAGTATATGTTAAGCAAGACTAATGCGGGCTTCCCTCTCGCTCATCTGTATCCGTTAGCTCCCACCTTGCTTGGGACTTTCTGAACATGCAGCCAAAAGGCCACGTTCGATGCACTGAAGAAGATAGCTGTGAAGCCAATCTAGTGTCTGAGGGAATGAGTTCGCTGAAATGTCAACAACGGTCAACCCCTGCGACTCAAAAGAACAAAGATAGTCCTGAATAAGCTTAAGGTTGTTTATAAGCTTTCGATGATCCTGAGGAAGACAATTATCCCTGGAAGCCCTGGTGGCTGTCCATTCCTCTAGCAATGCCTTGTGATCAAAATCAGACATCCTCAACACAATTGGGACT | |||||||||
gi|88301442|gb|CI500809.1|CI500809 CI500809 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTCATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGAGAACTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGTCCGNTATGGATCAATAAATACAATGTCATCACTATTTTCACTCTACGTGTTCTCATTCTGTTCCAAACAGATTACAATATCTCGATTGGTTGGAGGGCGAGCCATGTCTACAGCTTTTGGTGTGATAAACTGCAGAGCAAAACTACAAAAAAATCAGCCTTGAGCAACAACAG | |||||||||
gi|88960179|gb|CI382057.1|CI382057 CI382057 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GTCAACCTTTTTTGAGCTTTTTTTTTTAATTTTCCTTTTCCTATTACAGCTATAAAAGGTTTTTATCGAACTATGGAGTTCTCTACTCGGTTACATTTCCACTGCCCAACGTTTATGGATGGCGGCAACGCACAAGTTCTGATTATAAACCACTAAAAGCACAATTTTACAAGCATCATATATGTTACATACTCCCTCTGTCCCAAAATAAACCCGATGTGACACATACTAGTACTTGTGTCCAAGATGTATTAGGATGTGGCACATCCGTACAATGTTGGTTTATTTTGGAACAGAGTGAGTATATGTTAAGCAAGACTAATGCGGGCTTCCCTCTCGCTAATCTGTATCCGTTAGCTCCCACCTTGCTTGGGACTTTCTGAACATGAAGCCAAAAGGCACGTTCGATGCACTGAAG | |||||||||
gi|88904852|gb|CI712151.1|CI712151 CI712151 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCCGCTTCCTCCGCTCCATCCTCCTCCTTCTCCAAGCAGAAGTAGGACCAAGGGCCTCATCTGATCTCACCAACTCCTTCTGCTGCTGCAACATCATCTTCTTTTCAATTTTCGTCAAGCAACTTTGCCTTCAGCTGCTGCTGCTGCTGCCATTCGATCCATGTACTACTACTACTAGATGCAACCATTAATCAGTCATCTGTGTTTGCTCTGCTCCAAAAAAAAAAAAAAAAATTCAT | |||||||||
gi|89170512|gb|CI039789.1|CI039789 CI039789 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): TAACTGGAGAGGACANGTTTGGTCCANCTTGCGTCCTAAAAAGTGTCGTCCAGAAAAATCAATTCGGTAGCAGTACATGCTCTCTTTGAATGCCATGTTAAGGATATATCATTTAAAAGTGGACGAATTTTTAGCTACGTAATAATTTCATCTTCTCATGTTGATGTTGATATTGTGATGCAACTTTCTCGCGTCGATGGGCGCTCAAGATATTGACGTTCTGATCATGTTAGCACAGTTTTGCATTCAACCAAGGAAACAAACTGGCGGAGCTGTACGTGATGTCGTGATGTATGCTTACGTGCATTATTAAACTTTCTCTGTTTTAAAATATAATTAAACATTTTTCGCTGAGGTTTTGGAATGGAGGAAGAAGATATTGGTTTAGGAATGGAGGAAGAAGATGTATATTTACCTGTCTAGACG | |||||||||
gi|86480792|gb|CI123425.1|CI123425 CI123425 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): TTCTTTGGCAAACCCATTTTTTATTTTTGCTTGTTTGAGTCCATGAAAAGGAAAACTAATCAACAGGACGCATCTACATAAAAAAGATAACAAATCAATAGACTCACAAAATGTTAAATGTGAAACCACTAATCTGTAACATACTCATGCTGTTCTAAGATATAATTAATTCATTTCTTCTAAAGTATCGGTACAGAAACAATGTTTATCAGTAATCCTACAGCTGCTACACCTGAATCTCGCTGAACGATAATGAGTTTTGACTGCTCAGTCAAATCTACCAAGAACTGTGGGACTGTACAGACCACGTACAAAATGACAGCAGATCTTGCTGGCAGCAGTTCTAGCAGAAAAACATGGCCCCTTTCAAATTATCCTTTATAGGAAGAAGACTGCCAGTCTCTGAGGCTGCGCTGCTATCTTCTTCAGAAGGCAAGGAGGTGTGGCTCGTTGAATCGCCAATCGAGCGTGGTTTAATGTAACATCGAGCTCGTGATGACAGAAGACGAGCGTAGTGCACAGGGGCCACAACTGATATGGATTGGGTGCAAGTTCCGGAGGTGTAGCAGAGGTAGTTTGTGAGCTCTTGGAAAGAACCAGCCAAGAAGTCGTTCTCGTCCCACAGAACATGATAATACCTGGGCCGCTTAGTTCCCTGCGTGCTGCGGTGGCTACACAAGTAGAAATCAAACTGATTTGG | |||||||||
gi|88318720|gb|CI508316.1|CI508316 CI508316 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): CTTGCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGAGACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGNTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGCTCCGCTATGGATCAATAAATACAATGTCATCACCTATTTTCACTCTACGTGTTCTCATTCTGTTCCAAAAGATTACAATATCTCGATTGGTTGGAGGGCGAGCCATGTCTACAGCTTTTGGTGTGATAAACTGNAGAGCAAAACTACAAAAAAATCAGCCTTGAGCAACAACAGACGTA | |||||||||
gi|88568989|gb|CI499706.1|CI499706 CI499706 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): GCTTTGTCAAATAATCTATATATTCTATTTATTTTATTTTTTATTCTCACATTGTCATTGAAACGATATCGTTTGGATTTACATCTATGCACATCAATCCTCACTCGACCCTAGGCCGCTGAGACCTCTCGCTGCCGCTGCCAGTCCAGGGGCCTCAATGATGCTGGTGGCCTTGAACAACACCACAGTTAGTCTCCACAGCCCGCTATGGATCAATAAATACAATGTCCTCACTATTTTCACTCTACGTGTTCTCATTCTGTTCCAAAAGATTACAATATCTCGATTGGTTGGAGGGCGAGCCATGTCTACAGNTTTTGGTGTGATAAACTGCACAGCAAAACTANAAAAAAATCAGCCTTGAGCAACAACAGACGTAGAAGTACGAACAGCAGATCAGA | |||||||||
gi|117226609|gb|CT853292.1|CT853292 CT853292 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): AAGAAATCTTAATTGAAAGCATAATTTGCAAATTTACCTTCAAATTTCATGGAGCCAGCTGAGAAGAAACCAGACCAGGACGAAACCAAAGTCGACAATACAGAAGTCGATCCTGAATTTTCAGAGAAAGTCGCCCGTACTCTTCTCGGAGACGGTGAGTTCGACTTAGAGAAACTTCAGAAAATGGCAAAAGAGATGGGCCCAGGAAAAATGCCTCGTGAGTTGGCTGAATACGAAAGACAATACAAAGAACTTACCAAACCACATGCCTTTTGGGATACTCAACCTGTTCCAAAGATTATCGATAAATCCAGCGAGATCGATGGCGAAGTTGACAAAGAGCACGATTTAGCTGCTGTCCAGAAGGAGCCTTACGCACTTTTGGAGCAATTCGAATGGTGCCAAGTCGATATGCATAACAGCAAGCATGTTGAAGAGCTTTATAATTTCTTGAAAGAAAACTACGTCGAAGACGATGATGGTCTCTTCCGTTTTGACTATTCGAAAGAATTTTTGGTCTGGGCGTTGACTCCTCCAGGCTACTATCCTGACTGGTTGATTGGTGTCAGAGTCAAGAAGAACCAGAAGCTTGTTGGATTCATTTCTGGTATTCCAGTCCATCTTCAAGTTAACAAGAACTTGGTCAAGCAAACTGAGATCAACTTCCTTTGCGTGCACAAGAAGCTCAGAGCTAACAGATTGTCCCCAGTCCTCATCAAAGAAGTCACCAGAAGAGTTCATTTGAGAAACATGTGGGCAGCTATTTATACTTCAGGAACTCTCTTGCCAACACCAGTGGGTGCTGCTAAGTACTACCACAGGAAGTCTTTACCCAAAGAAGGTTGATCGAGGGTCAAAATCTCAAGGCTTTTCAAGAAACGCAACAATGTTCAGAACCAATAAAGCTCTACAAACTTCCAGAAGGAGGCAAAATTCCAAGGCTTGAAAATCAAGGAAAAAAAGGAAGCTTCAAGCCGTTCACAAACCTCTTAAAGGAAAAATTGTGCAAAATTTTTCCTTTGCCCTTTAAGGTTTTTTAAAGGGGGAACTTAAAAACATTGGGTTTTTTGCCAAAAAAGAAAAACTGATTACAAAACACCTTTGGGGTTTTAAAAACCAATAAAAAAGAAAAACCTTTTTTTTTGTATTTTAAATATTATAACTCCCCCTCTCCTATATTTTTAATTTCTCCCCCCAAAAAATAAAAAAGAGAAAAAACACAAAAGGAAACAAAAAGGGGCCCGCCTCTTTTTTTTATTTTTTTTTTTCTTTTACACCCCAAGAAGGGGAAACAAATCCATC | |||||||||
gi|88507923|gb|CI435429.1|CI435429 CI435429 Oryza sativa (japonica cultivar-group) 4 days after transferring callus Oryza sativa TTTTGGAACAGAGTGAGTATA EST sequence (targeted fragment marked with yellow): CGTCAAGCCTTTGTCAGTGCTTCAATTCTCTTCGAGATACACCATAACCGAATTAAAAATGCACTATATTTTCATCACTCTACCATAATCGACTTGAAAATGCACTGTATTATCATCACTCTGTACCAAAAAAAAATGCCACAAATTCACATTGATTCGATCCCCTCCCTTCCCCTCTCGATCAAAAAGATCCTTTTTTGGGCCGCCTAACTCCTGAATATCAAATTAATCTCTCTTCCTCTTTTAATTATTAATATTCAATCAATCATTGAAAGTTGNCTAATGATGCCGTACCTGTCGCCATCGCCATTGCCGCCGGCGGGTGCTCCCCTCGCCTTCCAGTTCTCGTACTCGGGGTCATCGGTGGGCAGCTCATGGCGGCACACCGGGNACGTGTTGCGGATGGCGAGCCACGGCAGGATGCACCGTCGTGGTAAAGGTGCGCGCAGGGCA | |||||||||