mature miRNA: TTTTGGAACGGAGGGAGTAT species: Triticum aestivum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|239861514|gb|GR303728.1|GR303728 WRIS_2873 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis TTTTGGAACGGAGGGAGTAT EST sequence (targeted fragment marked with yellow): GGCCATAAGGAAAGCAGTTGGTGCTGGAATGTATGCCCTCCCTTCTAAGTCACAGCTCTTGAAGAAACTGAATGAAGATGAAAATTCGGCAAGGGCTCAAATGCAGAGTTTCGTCAGGTCGTCTGGACCAGTAATTCTCTACGTCGAAGACCTCTTCACCTCCAAGAATTTAGGGCTAGACTGGTGAGCGAAACCTATACAGAGATTTCCAATGTACTAATGCGACTAGATGGTGTGCTGTGACCTCAAACAACTGTAGCTGGTTTTGGTGTTTGAGTTCGAGAGTTCAGAGTTGCAACCTAAATTCAATAAGCTGTGCTACCGTGGAGGTTCTTGACGGGTGAATACGGGAGCCGTTGTTACAAACCTGAAATTCCAGCTTATCTCTAAGCTGTTAAACTGGAATGCTACCCTGCAATGTATGATGTAACAACATGAAATTCCAGCTTATCTCTATGCTGTTGAACTGGAATGCTACCTGCAATGTACTCCCTCCGTTCCCAAATACTTGTCTTTCTAGGCATTTCAAATGGACTCCCAAT | |||||||||
gi|222365668|gb|GH721896.1|GH721896 AZO2.110O07F010115 AZO2 Triticum aestivum cDNA clone AZO2110O07, mRNA sequence TTTTGGAACGGAGGGAGTAT EST sequence (targeted fragment marked with yellow): GAAAAAGCTGAGTTATTCAGCCATATATGAACTTCCTAATTCCTGTTTCTTGTGGTCACATCCAAGAAATCTGCAATCAGATGACACTAACTGGTTTCTGCTGTCTCTGGATCGATTATGCGATCAGATACATGTACTAGATACTACTCCCTCCATTCCAAAATACTTGTCGTGGTTTTAGTTCAAATTAAAAGTAAAAGGAACAAGAAATTTCAATTTATCCTCACCTGAATTCCTGTCTTGTTCATCTGCTGCTCCAAAGGCAAAGCTCAGCACCTATGCACTCAAAGGTGATCTGCTGTAAGCTCTACATCTCTGAAAGCCAAAATGCGGCTGTTGTCGATGCCATCAGCCGCATAGGCCAGAAAGACCCTGAGGTGGTTCTACTCAACAAGTTCGAGGATGAGTACTACAACCGTGTCCGCTACACGCTTGTCTCCTATATTAACAGTGAAAGCGCAACTGGTGAAGCTGTATTTAGCCCAATCAGGAAGGTGCTGCTGGCGATGATCGAGGCTGCATTTTCAGCCATAAACCTCGAAGTGCACTGTGGAACTCATCCAAGGATCGGTGTCGTCGATGACATTTCATTCCACCCCTTGACTCAAGCGGNCACAATGGAGGATGCTGCTCAGCTGGCTAAGCTGGTAGCCTCTGACATTGGCAATGGCTTGCAAGGTGAGNTCCTCGACAATATCTTCATTGAC | |||||||||
gi|143800839|gb|CJ966760.1|CJ966760 CJ966760 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul5d13 TTTTGGAACGGAGGGAGTAT |