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mature miRNA: TTTTGTGACATATAATACATG
species: Triticum aestivum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|222364219|gb|GH724059.1|GH724059 G468.103B24F010809 G468 Triticum aestivum cDNA clone G468103B24, mRNA sequence

TTTTGTGACATATAATACATG
|||..|||||||||||||||.
AAAGTACTGTATATTATGTAT

EST sequence (targeted fragment marked with yellow):
CCACGCGTCGGTGGAACGCTCTCTTGCAGACGGCCGCATCACGCAGATTGTCTACAAGGGCGCGCATGATCACCCGAAGCCCCCCTCCACGCGCCGCAACTCCTCCGGCTGTGCGGCGGTCATTGCGGAGGATCATACCAACGGCTCGGAGCACTCTGGCCCGACGCCTGAGAATTCATCCGTCACATTCGGAGACGATGAGGCCGACAATGGCGCTGAGCCTGAGACCAAGCGCCGGTAAGTAATTGGTCATTGCTTGCCAAATACTACCTCTATAAACTAATACTCGGTGATGGCGCTGAGCCCGAGACCAAGCGCCGGTAGTACAAGATCACTAATATTATTACCTCCGTCTAGGTGAATAAGTCATTCACGTAGTTTTAGGTCATTGATTTAAGGAATTAAATATGTATTATATGTCATGAAAAATATATCACTAGATTTCTACACGATTGTAGTTTCTAAATATATATTTTTTGTCACATATAATACATATTTAGATAATTAAATCATCAACCTAGAACTACGCGAATGACTTACTCACCGAGACGGAGGTAGTAGTAACGCTGTGCTAATTTTCACTGCGGTTGGCTTTCTCGT