miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ATACTCCCTCCGTCCCAGTTT
species: Actinidia deliciosa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|195225308|gb|FG446857.1|FG446857 010510KAEB999012HT (KAEB) Actinidia deliciosa dormant buds before hydrogen cyanamide treatme 

ATACTCCCTCCGTCCCAGTTT
 ||||||||||||||||  ||
AATGAGGGAGGCAGGGTATAA

EST sequence (targeted fragment marked with yellow):
GGAAAGAAAGACCAAGAATATGGGACGGAGGGAGTAATAAAAATATTAACATGCCACGGGGCATGTCATACCCTTGTTCGAGAGTGTTGGTGTCAGACACGGATACAACGACTAGTTTAAAGTGTCTGTGCTTTATAGATCTCCAATGATAATTAACTAGTAGAGCTACTAACTAGATATAGACTTGTCGGGGATGTGAGGTTTTGGGAGGGATGGAGATTGGTGAAAATTGAGATTGTGGTGCTGCTGGACATGTCGGTCGTGGTCGTGGTCGTTGAAGAGGGAGGGGGAGAGATTGAGGGGCTAGATGGGTTGCAAGTGGTTGATTAGTTCTCTTTCACCTTCCCCTGCCCCCGATGCTCCCCACAACTGAATACTATGAGTTCGAGAAGCGAACAAGTTCATATCCCTGGTACAAACCCTTGTGGCCCAACTATGTGATGATGAAAAACTCGATAGA