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mature miRNA: CAGGAGCTTTAGTCCCGGTTC
species: Agrostis stolonifera
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|82774949|gb|DV868511.1|DV868511 CRP8243 Creeping bentgrass EST Agrostis stolonifera cDNA clone CR-EST09T_B09___ 3', mRNA sequ

CAGGAGCTTTAGTCCCGGTTC
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GTCCTCGAAATCAGGGCCAAG

EST sequence (targeted fragment marked with yellow):
CGATTTGTTGCGTTGATGACGTCGTAGAAGCCTCCACGACTGCGTACCGACCAGAAGGTAAGCCGTCCCTTGGCATTGCGCGATGCACATGGACATGCGCTCCTTCGCGAGTCATTTTGGCCAGTACTTGCTCTCCAACGAGTACCAAACCATCGCCCTCTTCCACTCCGTCAGTTGGTGGCGCTGGTCCGCAATCTTGTTGGCCAGCTCCCTGGCACGCGGGACTGGCAAACGGGCACCCAGCCATGGCTGATGTCGAAGCCCGGCGTCCAACGGTTGGGGAATCGATGTAGATGCCATCGAAACGTGACGCGAGGTCGGGGAATCGATGCAGCGGAAGGCAGAGGAATTACCAGCTGCAGAAATGGAGGCGGGGGTAGCCGGAATCGATGGCGGCGCACGGCGGCGACGGCAAAGCTCAACATCATACATGCTGAATTTTCCCTCCCGCCAACGCTTTTTGCGTATACAAGGAACCGACAGGTTGGTTGCATGACCCGGGTATGTGCGGTTTCCGGCGTCGAACTAAGCGAGAACCTAAAAAAATTAAGGGTTAGGTATCCACTCACTAGTGGAAAAACGATCTTTGGGCCAGGAGCATTAGTCCCCGGTCAACCTAGAACCGGGACTAAAGCTCCTGGTCCCACCACTGGATACCACTCCATGCCACTGCCATCTTTGGTCGCGG