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mature miRNA: CAGTTGTTCGACGAAATGCCT
species: Antirrhinum majus
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|51111128|gb|AJ795800.1|AJ795800 AJ795800 Antirrhinum majus whole plant Antirrhinum majus cDNA clone 018_3_09_b22, mRNA sequen

CAGTTGTTCGACGAAATGCCT
|| ||||||||.|||||||
TTCCACAAGCTGTTTTACGGC

EST sequence (targeted fragment marked with yellow):
TGATAAGATTGCCCTTCCATTCTAACATCTTCATCCAAACCAAAACTTAAATTCCATCTTCATCTACACTCTCAACTTCATCAAACTATTGCTAAATTTAGAATATCTGCAACAGTTTCTCAACATGTCGAATTCAAGAATCTTTTGCGACGGACGAAGAACGCAAGCAAAATCCCCTGAGAAATCCAATTTTGTGCAGACTTGCAATCTGTTGAGTCAGTATATTAAAGAGAAAGGCAGTCTCAAAGACTTAAATGTTGAGTATGGTGGAAAATTGGAGAGCCTCGAAGCAATAGTGAAACCCGGATCAATCCATGCTGAACCCACTTCAACAACAATGAATTTACTGACAAATTTAGGAAAATCAGCTCAGTCCACAACAGAAAAACTGCCATTTGTTGAACCTCTGCCTCAGCTCGCCACACCGGATAATTTCATCAATTTAACAGAAGATGAGACGATGATTGAGGCGAAGAGTTCACAATTGACAATCTTTTATAAAGGGAAAGTGTTGGTGTTTGATGATTTTTCAGAAGACAGAGCGAAAAAGATAGTTACTTTTGCTGAAAAAGGAAGTGGGAAAATTCAGTGCGGCATTTTGTCGAACACCTTGCAGGAGAAACAGAATCGATCTGAGGCTGTGG