| mature miRNA: AATGAAGAAGCTGAAGAACAT species: Aquilegia formosa x Aquilegia pubescens database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|71699464|gb|DR930101.1|DR930101 EST1121640 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1O088, AATGAAGAAGCTGAAGAACAT EST sequence (targeted fragment marked with yellow): TTTCATTTCGAATTTACTAAAAACAGTTTCAATTGTCATGGAGAAACAATAGAGAAATAGGAAAGTCGGAGGTTTTAAAACTTACACAAGCAGTCATGATTCTAGTAATCTATCGCAAAACATCCAAACAGAGCGAGAGAAGCGAAGATGCACAAAACTCCTTTTCTCTTTATGTTATAAATCACGAACAACCCATCGCCTGAACCAAACTCAGAGAGAGAGGAATCATTTTTTTCTTCTTTCTTCTCTGTTGAGAAAGAGAGAAAGGAAAGGAGACGTAGATTTGCGGTTTACAACGCAGCTTTGACCGTTGACTGCATAAATCTCACGCAATTGGGCTGAAAGCCTTGCAGAATGGTTTGTCCTGCTAGTTAGATAGCTTCTCACAGCAGTAATTGACTGATTGTCATTCCGTCTGAGAAGGATAGAAGTGAAGACTAAGCTGGAAACATAACTGGGACCAACATCTAACGCTCGCATATGGCGTCTTTGTGGAGCACTTTCGCTTCATAAAGTAAACAAGGCCTCAATACAAGAAGCTCAGCCACTTTTGCAGCACTGGATATTGTGCAGCTTCTTCATTTGCCTCCAAAAGAAAATCACGCAAGTTAAAAAAATGGATCGAACGAGTTCTTGAAGGAATGCCATTCTATAATCACCAATGCAAATAGAGTTACCTCACCATTAAGGTATTAAATCAATAAGAAATTTCTACCTTCATCAATAAAGACTGAATCAACTTCATCAACTATTCCAAAGTGAAATGAATTTGACCTGTTTCAGAAGACTTGTTGTTCTCCAGGATTCAAAGAGTGAATATGTGACTCTTACC | |||||||||
gi|74563552|gb|DT760651.1|DT760651 EST1194500 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1YF87, AATGAAGAAGCTGAAGAACAT EST sequence (targeted fragment marked with yellow): TATTTGCTCACGACATAAATTTCATAATGTAAGAGAGACCTTGGAGTTGCCTCACAAAACTGAAGACTACCACCAGGGTGATTGGACGCAACTTCTAGTTCTGCATCATCTGTGCTGATAGATAGGTGACTACTTCAAGTTATCAAGTGCAACTTTGTCGCTAGGTAGATCGGGTCCCTGAGGAATCTTTCCGGGGTAGTTTGTGGTCGAAGAATCCGATCCTATCATATTTGTATCTACAATTACCATTGACCGCAGCTCACAATTAGTAAAGTGTTTGCAAATTTCTTCTCTCATCAATGGATGATATCTGTTTCCAAGTTCTTTGAGAGTATGAAACAAGAAACCACTATGTGTAACAATTGCGATTTCCTTTTCTTTTCGTGTCCATAACCAATTCAAAAATTTCATTCCCCTAGCTGCAACACCTTCATTAGGTTCTCTGATGTCAGGCTTCCACCAAATATCTTCATCACTCTCTACCAGAGAAAAATCTATTGCTGGAAAAAGTGGCAGATACTCATTAATGCTTCTCCTCTTATCACATGGACGAACTCCCAAATGTTCTCGACACAGCTCTACTGCTATAAAAGGTGGGCAACCTAAACTTGAATATGCAGAACGATCACTTTTCCCTGCATTTGCCACCATGAGAGGTAGATCTGTTCCATCCTCATAACTATCACCACCAAATACACCCACTGCCGTCTGCATTGTCCTTAATAGAGGCGATGTGATCACTAAATCAATCCTCTTAGATAGACCACACTCACGAACATGGGTACGCAAGTTATCCACCTGCTGCCACCCCAGAGGAGTAAGATGTGCATCAAAAAGTGCTGGAGATAAGAATGCTTTGTGATCCTTTTCAGCTTCTACATTATGAATCCCTTGAGCATGCCTAATCAGATGCAATGTT | |||||||||
gi|71714833|gb|DR945470.1|DR945470 EST1137009 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1QT18, AATGAAGAAGCTGAAGAACAT EST sequence (targeted fragment marked with yellow): GGGTTAAAATTTCAAAACGTTCATCCCCGTGAAAGATCCTAAAGAAAATTACGGGGTAGCACTCTGCCATAACACTGCAGAGACCACAGAATGTTCTAGACCTAGCTGTTTTTATTCTCAGTAATGGCGTGGTGAGGCTGTAAAGCAATAGGAGATGAATTCGAAGAAAAGAAGAATATAAACGAGAAAAAAAAAATTCAAATTTGAAAAAGAAAAATTGTTGTATGCAATCATTCAGCAGCCTCTGGCTCCGGTTTTTTTGCTGGCTGATCCTCGGCTGGTGCTGCCTCTTGTTTTGAAGTGTCATCAGGAGCACCATTAGCTACAACATCTTTAGTAGGTGAGCCTCCAGCAGTGGCTGCGGCTGCATCTGGAGTAGCTTTTCCATCCTTGGCATCCTTTCCTTCTTTGGTATCCTTAGCATCCTTTCCTTCTTTGGTATCCTTAGCATCCTTACCGCTCTTTGCATCCTTACCATCCTTCCCTTCTTTTGCATCCTTACCATCCTTCCCATCTTTTGCATCCTTTGCAGGTGCAGGAGGGGGTGGTATCATGTGAGGTGGGGGTGTGTGCTTCAGCTTCAGGAGTACCTGACGCATCCTTGCAAGATCAGTGGGCTTCCCTGGTTTAGGTCCCTGGACAACAACAATTGATGGCTTCTTGTCTGGATCCTTCCTTCCTCTCTTCTCAATTTTGGAAACCTCATTGGGAATGAGCTCAGCTATTGCCTTCCAGTACTGTTTGTCTGCCTCTTTGTGGAATTTCTCTCGGTTAGCCAGGTATAGCTTCTCTTTTTCTCTGTTATTAGTCTTGTTAGTCTCACAATTAAGTTTCCTTTTCTCATAGAATGAGCGTTTAAATTCTTCAGCTTCTTCAATTATCTGGTTGCGCATCTCCTTCTCTTGCTTCT | |||||||||
gi|71702991|gb|DR933628.1|DR933628 EST1125167 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1OQ12, AATGAAGAAGCTGAAGAACAT EST sequence (targeted fragment marked with yellow): CAAAGCCGATTCGAACAAGTGTTTCTGCTAAACCAGAGAGTTTTGAAAAGCCTTTGCAGTATGAACAGAGGAAATCAACGAACATTTATGAATCTCATTATCATCATCTACATGAAAGAATAAGCTCTGTTCCTCAGAAAGTGAAACAAGAAGGCGGTTTCAACAAGACGAAATCCAAAGCTATGAAGATCTATGGTGATCTTAAGAAGGTAAAACAACCAATTTCACCAGGTGGAAGACTTGCTACATTTCTAAATTCATTGTTCACTGCTGGAAATACGAAGAAAGCGAAACTTTCTAATTCTGTTAATGGAATTGAAGATTTGAGGTCTGAAATAAAATCAAAGTCCACACAAACATCTACATGTTCTTCAGCTTCTTCATTTTCAAGGTCTTGTTTAAGCAAAACTCCATCTTCAAGAGGAGCAAAATCCACTAATGGTACT | |||||||||
gi|71697980|gb|DR928617.1|DR928617 EST1120156 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1NR53, AATGAAGAAGCTGAAGAACAT EST sequence (targeted fragment marked with yellow): CACTTTTGTTGAAAACTAACCATTTGATTCATGTAGTCCAAGAAAACCTCCTACACAAAAACTATCTTACAAAACATATTAAAAGAACTAAAACAAGCAAAATACCTATATCACCAAGTCTGCTGATAGTGAACATAACTGTAGTTTTGCTTCACTTGATTGTTGAAAACAAATGCTCCTCACATAATAGATTCCGGATAGCCGAGATGTTTTAAAAAAACAAATGCTCCTCACATAATAGATTCCGGATAGCCGAGATGTTTTAAAGACAGTCCGCATAACAATCTGATCAAACTAACTGCTTGTAGGCTGGCTGTCAGTAATTCGCTATTTTTTTTCTTCTGCTATTTCACCCGTTTTCATATATATATTTTTCCCGTCAAGAAATGACTTTCCAGCTTCCCACCAATACAATGGATTTACCAGATATAAATGTCGTCAGGCTAGAATGTTGTATTTTCACTGTGTAGCGCATACCATAGTCTTCTCAGCCTTGGCAAAAGGCCCAAGAGTGAATAGTTGTTGGTGGCTTATTCAATTAAAGCAAACGTAATTTCCCTGTCACCGAATCCACAGATGCCTTTCTGCCAGGTCCAATGGCAAGGACAGTCTTTGAGCCAGCCACCACCTGTGTGCGTCCTGCATCAGCAACGACAAAAGTGGGTAGACCGATGTTCGCCGCCATTTCCTTCAGCTTATTCATTTCCTGCTGGTTCTTGCATGTAACAACTATC | |||||||||
gi|74532456|gb|DT741216.1|DT741216 EST1175065 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1UY53, AATGAAGAAGCTGAAGAACAT EST sequence (targeted fragment marked with yellow): AAAACCTCCTACACAAAAACTATCTTACAAAACATATTAAAAGAACTAAAACAAGCAAAATACCTATATCACCAAGTCTGCTGATAGTGAACATAACTGTAGTTTTGCTTCACTTGATTGTTGAAAACAAATGCTCCTCACATAATAGATTCCGGATAGCCGAGATGTTTTAAAAAAACAAATGCTCCTCACATAATAGATTCCGGATAGCCGAGATGTTTTAAAGACAGTCCGCATAACAATCTGATCAAACTAACTGCTTGTAGGCTGGCTGTCAGTAATTCGCTATTTTTTTTCTTCTGCTATTTCACCCGTTTTCATATATATATTTTTCCCGTCAAGAAATGACTTTCCAGCTTCCCACCAATACAATGGATTTACCAGATATAAATGTCGTCAGGCTAGAATGTTGTATTTTCACTGTGTAGCGCATACCATAGTCTTCTCAGCCTTGGCAAAAGGCCCAAGAGTGAATAGTTGTTGGTGGCTTATTCAATTAAAGCAAACGTAATTTCCCTGTCACCGAATCCACAGATGCCTTTCTGCCAGGTCCAATGGCAAGGACAGTCTTTGAGCCAGCCACCACCTGTGTGCGTCCTGCATCAGCAACGACAAAAGTGGGTAGACCGATGTTCGCCGCCATTTCCTTCAGCTTATTCATTTCCTGCTGGTTCTTGCATGTAACAACTATCTTCGGTTGACCACAGTCCTCCCACTGTCTTAGAAGGGACCTATGGCTTTGCATCATTTCTGCATACATTCCAGTGGCAGCATGGGCACATTGAGATGCAATCTTTCCAGCTCCCATTCTAAGGTCT | |||||||||
gi|74550056|gb|DT752722.1|DT752722 EST1186571 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1X418, AATGAAGAAGCTGAAGAACAT EST sequence (targeted fragment marked with yellow): TTCTAAAACAAGCAACTTTCTCTCTCTAAAATGGAGAGAGAAAATCTGAGTTGTTCATCTTCTTCTTCTTTAGAAGCATGTGAGTTACTCTGACAGATTCTTCTCTTTTCTCCTTTTCTTTGCTGTCATCATCTTCTTATTCTTCTGTTTTACTTCTTCGAGGTGATTGGATATTTCATATTTGGATTGATTGTTAATTCAATCAATTAATCAATGGCGGCATCATCATCATCTCGAGGAAGAAGTAGTTCACCATTTGGTTATAGAAAGCCATCAAGTCCATATTCATCAACATCTTCAACTTCATCATTAATTAATAATAATAATAACGGAGGAGGAGGAGGAAGATCTTCTATTCCTCGTTCTTGTTCATCTTCAGCTTCTTCATTTTATGGTTCTGGTAACGGTTTCTCTTCTTCTAAATCTATTAATCGAAGTCGAAGTGAACCAATGTATCGTGGTGTTGGTGGTAATACTAGTTTGAAACTTCAAGGAAATCGTACTCCAGTTCCATTTCCTACAGCTGAAGAACTCATTGGTGAACCTGTTGATGCTTCGAGATCTGGTGATAGCATTTCTGTTACTATTCGATTTCGTCCATTGAGTGAACGTGAATTTCAGAAAGGAGATGAGGTTTCGTGGTATGCTGATGGAGATAAGATTGTGAGAAATGAGTATAATCCTGCCACTGCATATGCTTTTGATCGCGTCTTTGGTCCTTCAACTAATTCT | |||||||||
gi|71687494|gb|DR918131.1|DR918131 EST1109670 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1LZ59, AATGAAGAAGCTGAAGAACAT EST sequence (targeted fragment marked with yellow): ACATCAAGCTCTATGTTGTTTGGCTTCTTCTTTGTGTCGAAGAGATCAAAGGGGGCCCTCTTGGGCACAAAGAGAACAGCCTTTGGCTTCTT | |||||||||
gi|71682081|gb|DR913223.1|DR913223 EST1104762 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1L626, AATGAAGAAGCTGAAGA-ACAT EST sequence (targeted fragment marked with yellow): CTCTAAATCTCCTACAATCTCTCTGACTCTGCCCGCCGCATTATCGAAATGAAAGGAAGGTTATGCGAGCTTTGTAATGGAGAAGCATGGTTATACTGTGTTTCTGATTCAGCTTTTCTTTGTTTAAATTGTGATGCTAGAGTTCACCAAGCTAATTTCTTGGTTGCTCGTCATGTTCGTCGAACTATTTGTTGTAAATGTAAATATTTTGATGGAAATAGTATCTCCGGCGTAGGATTCCGACGACACATTGAACCGATTTGTCAGTCTTGTTTATCTAATTGTTCTTCTGATTCTAATTCTTCTTGCACTTCTTCTTCTACTACTTGTATTATTTCCAGTGTTAATCAGAGTTCCGATCAACTAAACTCATCATCGAAAATTGTTTTCTCCGGCGGAAACTCCTTTCTCCCGACAAAGTATTCCGATGAAGTTTCAAAGAATAACAAGAAGAAGAAGAATCGAAAGATCGTGGAAACTCGTTCTTTGAACGTGGATTTCAAAGAAGAAGATATTTTAGTAAATTGGTATAGAAAATTAGGGGTAAAATGTAATAGTAACATTTCTATCAAACTCGCGTTACACGCTATCTCAATTTGTTTACAGAAATTTACGAATTTACCATTTCGTGTATCTTTGGCTTCTTCATTATGGTTATCATTGAAGCTCGCAAAGGAAAAACCAGCAGTGGCTACGTGTCAAAATCTAAAGAAACTTGAACAAATCTCTGGTGTTCCAGCTAAACTGATCATACTAGCTGAGAAGAAGATATCTATTGTTTTGAAGAAAA | |||||||||
gi|75461401|gb|DT769019.1|DT769019 EST1202869 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1ZU54, AATGAAGAAGCTGAAGAACAT EST sequence (targeted fragment marked with yellow): TCACAGATCGATGGTAAAGTACACTGCTAGGGTAAAATAGTACATTGCTTAGAAATTGAGATCTCTCTGGAACAGAGAGCTTGTATTATAAATGTAGTGTGCAAATAGTGCATTTTACAACCCATCCGATGCCAACAATTTTTCTTCAGTACTCAACAAAGATACACATCTGATTGCAATGGCAACCCAGAGAGTTAGTTATTAACAATCTTCCTTTAGTGCTCAAAGCCTCAGACGGACGAGATACACATCTGATTCTCATTGCATCCCAACCATCAAGAGAAACATATGTAATTTTCTGGAAACTGAAGTCTAAAGACAACACACGCTAAAAGAGGCTGTTCCATAATTGGGATAATAGACCGTATAGAGTGAAACAAGCAGTCATGATTCTAGTAATCTATCGCAAAACATCCAAACAGAGCGAGAGAAGCGAAGATGCACAAAACTCCTTTTCTCTTTATGTTATAAATCACGAACAACCCATCGCCTGAACCAAACTCAGAGAGAGAGGAATCATTTTTTTCTTCTTTCTTCTCTGTTGAGAAAGAGAGAAAGGAAAGGAGACGTAGATTTGCGGTTTAAAACGCAGCTTTGACCGTTGACTGCATAAATCTCACGCAATTGGGCTGAAAGCCTTGCAGAATGGTTTGTCCTGCTAGTTAGATAGCTTCTCACAGCAGTAATTGACTGATTGTCATTCCGTCTGAGAAGGATAGAAGTGAAGACTAAGCTGGAAACATAACTGGGACCAACATCTAACGCTCGCATACGGCGTCTTTGTGGAGCACTTTCGCTTCATAAAGTAAACAAGGCCTCAATACAAGAAGCTCAGCCACTTTTGCAACACTGGATATTGTGCAGCTTCTTCATTTGCCTCCAAAAGAAAATCACGCAAGTT | |||||||||
gi|71706344|gb|DR936981.1|DR936981 EST1128520 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1PE81, AATGAAGAAGCTGAAGAACAT EST sequence (targeted fragment marked with yellow): CAAAGTTCGAACAAGAAGTAGAAATCCTTCTTTCTCTTCTTCACTTCTTGATGCAATATATCGTTCTATTGACGAAGGTGAAGAAGATTTAGTACTTTATAAAGAAACTATGAAGAAGAAACAAACTACTAGTACTACTACTACTAATAGTTTGAAAAGAGATGAAAAAAATATTGATGATTTTACTAGAGCTTGTTTGATTGAGAAATGGATGGAAAAGAAAGTAAGTGAGAAAGTTGTTGTTAAACGACAATCTGTTCGTGATTTTGATCAGAAGTTGCAGAACAATCGTTCTTCATCAACTGCTTTTCATTCTGCTTCAAGTTCATCTGATTCAAGTTCTGCTGGAGGTTTTTCTTCATCTGAAGCAGAATCATTGTATGGTTCAAGAATTCAAAGACCAAAGCCGATTCGAACAAGTGTTTCTGCTAAACCAGAGAGTTTTGAAAAGCCTTTGCAGTATGAACAGAGGAAATCAACAAACATTTATGAATCTCATTATCATCATCAACATGAAAGAATAAGCTCTGTTCCTCAGAAAGTGAAACAAGAAGGCGGTTTCAACAAGACGAAATCCAAAGCTATGAAGATCTATGGTGATCTTAAGAAGGTAAAACAACCAATTTCACCAGGTGGAAGACTTGCTACATTTCTAAATTCATTGTTCACTGCTGGAAATACGAAGAAAGCGAAACTTTCTAATTCTGTTAATGGAATTGAAGATTTGAGGTCTGAAAGAAAATCAAAGTCCACACAAACATCTACATGTTCTTCAGCTTCTTCATTTTC | |||||||||