| mature miRNA: TCGGACCAGGCTTCATTCC species: Aquilegia formosa x Aquilegia pubescens database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|74530024|gb|DT739703.1|DT739703 EST1173552 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1UP50, TCGGACCAGGCTTCATTCC EST sequence (targeted fragment marked with yellow): GACTTTGAGTTTTGAGGTTCTTTCTCTCCTTTACTCTTTCGCATATTCTCGAAATCGGCATTTAGGGTTTCGAGATTCTACAGGATTTATCTTTGTTTATTTTAAGAAGATCGAAAGATGTCGAAAGGTGGAGCTTTGGATCTAGCATCTGGTGTTGGAGGAAAGATTGAGAAACAACAAGTTCTTTCTGCTGTTGATAAGTATGAAAAATATCATGGTTGTTACGGTGGGGACGAGGAGGGTAGAAAAGCTAACTACACTGACATGGTTAACAAATACTATGATCTGGTGACCAGCTTCTATGAATTTGGATGGGGAGAGTCTTTCCATTTTGCAAACAGATGGAAGGGGGAATCACTTCGGGAAAGCATCAAAAGACATGAGCACTTTCTTGCTTTACAACTTGGCCTGCAACGTGGACAGAAGGTGTTGGATGTGGGATGTGGAATTGGTGGACCACTCAGAGAAATTGCTAGATTTAGCTCAACATCTGTGACAGGATTGAACAACAATGAATATCAGATCTCAAGAGGCACAGAGCTGAACCGCACTGCTGGAGTGGACAAGACCTGCAACTTTGTGAAGGCTGACTTCATGAAAATGCCATTCCCAGACAATACTTTCGATGCAGTATATGCAATTGAAGCCACCTGTCATGCACCTGATGCACTTGGATGCTACAAAGAGATTTACAGGGTGTTGAAGCCTGGTCAGAGCTTTGCTGCATATGAATGGTGCATGACTGACTCATATGATCCAAATAATAGCGAACACAAAAAATAAAGGAGACATTGAGATTGGTGACGGCCTTCCAGATATCACGTTGACAAACATGCCTTGAAGCTCTGACCTTGCAGGTTTGAATCATATGGGAGAGAGACTTGCT | |||||||||
gi|71722953|gb|DR953590.1|DR953590 EST1145129 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1S832, TCGGACCAGGCTTCATTCC EST sequence (targeted fragment marked with yellow): GTGAATGCAAACAACTTGAACTCAAAGGAAACTACCTGGCGTCCAGTTCTTCCATCGCCAAACCAAGAGAACAGAGTGCTAGATCCAAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTCAATGTGACTGTTGAGGAAGTCTGTGAAGCCCTTTTGGAAGGTAATGCAGATACATTAGGAACAGAGCTTCTCGAAAGTTTGTTGAAGATGGCCCCAACCAAAGAGGAAGAACGTAAACTAAAAGAGTATAAGGAAGATTCACCGATGAAGCTTGGTCCGGCTGAGAGATTTCTCAAGACAATGCTTGATATTCCTTTTGCATTTAAGAGAGTTGATGCAATGCTTTACATTGCCAACTTCGACTCAGAGGTGGATTATCTTAAAAAGTCATTTGAAACGCTAGAGGCAGCCTGTGAAGAATTGAGAAGCAGCAGGATGTTTATGAAGCTTCTCGAGGCTGTGCTCAAGACTGGTAATCGCATGAATGTTGGAACCAACCGTGGTGATGCACATGCTTTCAAGCTTGACACACTCCTAAAGCTGGTCGATGTCAAGGGTACAGATGGGAAGACCACCCTACTGCATTTTGTTGTTCAGGAAATTATTAGAGCTGAAGGCTCTCGTCTCTCCACTGCCAATCAAAGCCTTGCTACAAAACCCCAGCAAAACAGTTTCCAAAATGAAGTGGAATTTAGAAAGCTTGGTTTACAAGTAGTTTCCAGCCTCAGTGGGGAGCTCTCCAGCGTGAAAAAAGCTGCTGTGATGGATTCTGATGTGCTTAGCAGTGACGTCTCAACGCTGTCCAGAGGACTTGGGAACATTGGGGGAG | |||||||||
gi|71722598|gb|DR953235.1|DR953235 EST1144774 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1S605, TCGGACCAGGCTTCATTCC EST sequence (targeted fragment marked with yellow): CTGTTGTCCATTGCAGAAGAAACTTTAACAGAGTTTTTATCGAAGGCTACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCATTGCTATTTCTCATGGTTGCCCTGGTGTGGCAGCTCGAGCCTGCGGCCTAGTGGGTCTTGAACCCACAAGGGTCGCAGAAATTCTCAAAGATCGGCCGTCGTGGTTCCGCGATTGCCGAGTCGTGGATGTGATGAATGTACTTCCCACTGGTACTGGTGGGACCATTGAGCTGCTCTACATGCAGCTATATGCACCGACAACATTGGCATCTGCTCGTGACTTCTGGTTGCTACGCTACACTTCTGTCTTAGAGGATGGTAGCCTTGTGGTCTGTGAAAGGTCTCTTAGCAGTACCCAGGGTGGTCCCAGTATGCCACTTGTTCAGCATTTTGTGAGAGCAGAAATGCTGCCAAGTGGGTACCTAGTAAGGCCTTGTGAAGGGGGTGGATCCATAATACACATTGTTGATCATATGGATTTGGAGCCATCCAGTGTTCCTGAGGTGTTGCGCCCATTATATGAATCACCAACTGTACTTGCTCAGAAAACTACTATGGCGGCGCTACGACAACTTAGGCAGATTGCTCTAGAGGCTTCTCAATCAACGGTTACTGGATGGGGCAGACGTCCTGCAGCTCTACGAGCACTTAGCCAGAGGCTGAGTAGGGGTTTCAATGAAGCTCTTAATGGTTTCACCGATGATGGGTGGTCCCCTATGGGAAGCGATGGTATGGATG | |||||||||
gi|71713497|gb|DR944134.1|DR944134 EST1135673 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1QK95, TCGGACCAGGCTTCATTCC EST sequence (targeted fragment marked with yellow): ATGAATCATGACTCTTCCCTACCCTGGGGCCTGGGCATAATCCATAAAGCCAATACAATTCCATAAAGAATCTTCAGTTGAGGATGTCCGATGACACGAGCTTAAATAACGTGCAGGATTTATCACAACTGGGTCTAATTACGTGTCACTGACGGTTACCTTTCTGATCTTCTGAGCCAAAAATAAATTGAACTCTCTGATCTTTGTTTATTTTAAGAAGATCGAGAGATGTCGAAAGGTGGAGCTTTGGATCTAGCATCTGGTGTTGGAGGAAAGATTGAGAAACAACAAGTTCTTTCTGCTGTTGATAAGTATGAAAAATATCATGGTTGTTACGGTGGGGACGAGGAGGGTAGAAAAGCTAACTACACTGACATGGTTAACAAATACTATGATCTGGTGACCAGCTTCTATGAATTTGGATGGGGAGAGTCTTTCCATTTTGCAAACAGATGGAAGGGGGAATCACTTCGGGAAAGCATCAAAAGACATGAGCACTTTCTTGCTTTACAACTTGGCCTGCAACGTGGACAGAAGGTGTTGGATGTGGGATGTGGAATTGGTGGACCACTCAGAGAAATTGCTAGATTTAGCTCAACATCTGTGACAGGATTGAACAACAATGAATATCAGATCTCAAGAGGCACAGAGCTGAACCGCACTGCTGGAGTGGACAAGACCTGCAACTTTGTGAAGGCTGACTTCATGAAAATGCCATTCCCAGACAATACTTTCGATGCAGTATATGCAATTGAAGCCACCTGTCATGCACCTGATGCACTTGGATGCTACAAAGAGATTTACAGGGTGTTGAAGCCTGGTCAGAGCTTTGCTGC | |||||||||
gi|71706543|gb|DR937180.1|DR937180 EST1128719 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1PG03, TCGGACCAGGCTTCATTCC EST sequence (targeted fragment marked with yellow): GTTGTTGCTCTAGCTACAATTGTTGGATCAGTCCTTTTTTTCTATATTTGGCGGTGTTGGTATCGCTTGTCTGCCTTTGGGACTCATATTTTCATTCATACGCCGCCCGAAAGCCGTGATAACTCGCTCACAATATATCAAGGAGGCAACCGAACTGAGTAAAAAAGCCAAAGAACTGAAGAAAGCTGCTGATGCACTTCATCAAGAAGAGAGAAGTGGTTCTAAGGGGAGAAAATGGCGTAAAAATGTTAAATCAGTCGAAAAGGAATTACTTTTGTTGGAAGAAGATGTTAAGGCTCTGGAAGAGATGTATCCTCAAGGAGAAAAGGCGGAGACGGCATGGGCTTTAACTATTATCGGCTATCTGGCTAACCTTATTTTGGGAGTCCTAGGGTTGATTGTATCGGTGGCTTGGGTTGCACACATCATTATCTATTTGTTAATTGATCCTCCACTTTCTGCTTTTCTAAATGAAGTTTTCATCAAACTGGATGATATATGGGGCCTTTTTGGAACAGCTGCATTTGCTTTCTTTTGCTTCTACCTTCTGATTGCAGTGATTGCAGGGGCAATGATGCTTGGTCTGAGATTAGTCTTCATAACAATTCATCCCATGAAGTGGGGAGCTACTTTAATGAACTCGTTCCTCTTCAATGTGGGACTTATTCTCCTTTGCTCCATCAGTTCTGTGCCACAGCATTTGGTTACTATGCTCAAGCAACCGCTGCTCAGGAAATATTTGGCCACACCTTACAGTCCCTCCGAGGAATTAAGTATCTGTATAAGTACAATGTGTTTCAAATTGCGTTTGTTGTTTTGCGGGACTTACTTTTGTGTATTATGCAGCTTTT | |||||||||
gi|71694806|gb|DR925443.1|DR925443 EST1116982 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1N815, TCGGACCAGGCTTCATTCC EST sequence (targeted fragment marked with yellow): ACCATATAAATTCTGGGAAACCCCTCTTCCTCCAGCACAGATCCATAGTACCACATTTTCTAGACCGCCAGTTCTTATTACTCCTCTTAAACCTGTTGTGTTCCAGAATCCTGCTGTGGTTGCCCCTGCTGAGTTTATGCAGAATCCAGCTATACTTGACAAGAACGAGGACACCCCAAAACCAAAGCTGAAGCCTTTACATTGGGATAAAGTCAGAGCAAGCTCCGATCGAGCAATGGTGTGGGATCAGTTAAAATCGAGTTCTTTCCAATTGAATGAAGAAATGATTGAGACATTGTTTGTTGTGAATGCAAACAACTTGAACTCAAAGGAAACTACCTGGCGTCCAGTTCTTCCATCGCCAAACCAAGAGAACAGAGTGCTAGATCCAAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTCAATGTGACTGTTGAGGAAGTCTGTGAAGCCCTTTTGGAAGGTAATGCAGATACATTAGGAACAGAGCTTCTCGAAAGTTTGTTGAAGATGGCCCCAACCAAAGAGGAAGAACGTAAACTAAAAGAGTATAAGGAAGATTAACCGATGAAGCTTGGTCCGGCTGAGAGATTTCTCAAGACAATGCTTGATATTCCTTTTGCATTTAAGAGAGTTGATGCAATGCTTTACATTGCCAACTTCGACTCAGAGGTGGATTATCTTAAAAAGTCATTTGAAACGCTAGAGGCAGCCTGTGAAGAATTGAGAAGCAGCAGGATGTTTATGA | |||||||||
gi|71702362|gb|DR932999.1|DR932999 EST1124538 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1OL42, TCGGACCAGGCTTCATTCC EST sequence (targeted fragment marked with yellow): CTTCCTTTAGCTCCTTCTTAGTACAGTGCATCTCTAATTAGTTTTTATCTCTAAATCCTTCTCTTCTAGTTGCTGCTTCAACGTAAGTACCATTTCATTTGATTTTTCCACTTCATTAGTCAGTCCTTCCATGTATTCCCGCAATCCTTCAAACTGATTTCTGAGTTCCGCATTTTGAGATTTTTGCAGTGCAAGTTTCATTCCCAATTCATGGATCTTCCCTTCAGAAGCCAACGTTCCAATCTCCTCATTTTCCTCCTGCAAGGTCCTACATTTGGCCATTAGCATCTTCCCCATCTTGCTTTGTGGGGTAAAGTTGACAGCAGCGACGTTATCCTGCAACTCTTTCACTTTCTTCTCTTTTTCCTCAACTAAGTTCTGCAATTGGAAGTATCAGGCATGCACCTTTAAACGTGTAAACTCCTCATGTATAGCTGGATCAAGTAATAACTTCCTTGCCTGCATTGACGGTGGCTTTAGTTGTGCTCTGAGATCTCGAACAACAGCCTTCAATTCGGTTATCTCCTGCTCTCTTTTCGCAAATGTTACAATAAATGCAGCTTCCTTTTTTTTAGCTTTCTCAAGCTGTTCCTTCAGTGACTCCTCGGAGGATTTTACAGTCTGAAGGTATCTAACCACTAAACCAGGTTCTGGAAATGAGCCTGGTCCTATACCTGGCTCATTTTGGAATGCAGAATACCACTTTTGAATCTCTGATTTTGCAGCTTCAAGCTCCGCCTCGCATGTTCCAAGGGTATCCTTGCAGCTCTGAAGACTTTCACGAAGAGATAAAATCATTCCAGTGGCGAC | |||||||||