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mature miRNA: AAGCTCAGGAGGGATAGCGCC
species: Arachis duranensis
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|296562154|gb|GW940963.1|GW940963 Dur25.seed.ADAA-aaa22f08.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

AAGCTCAGGAGGGATAGCGCC
|||||| |||||.||||  ||
TTCGAGGCCTCCTTATCAAGG

EST sequence (targeted fragment marked with yellow):
ATTACTATTTTCCACCAAACCCAAACACAAGAAACCATCCCAAAACCCAAACCCTAACTCAATTCCGATGCCAATTCCAATTCCAATTCCACTACCACGTGTTCAGATCAAACGCTAACTGCTTCGTTTTCACACCATGGAACTACAATCCCTATTCTTCTCGTTCCTCTTCTGCTTTTCGCTAACCCTAACCGCCGTTCACCTCGCCGCCGCCAATTCCGAAGGTGACGCACTCTACACTCTCAAACGGAGTCTCTCCGACCCCGATAACGTTCTCCAGAGCTGGGATCCAACACTTGTTAGCCCCTGCACTTGGTTCCACGTCACCTGCAACCAGAACAACCGCGTTACTCGAGTGGATCTCGGTAACTCTAACCTATCTGGACATTTGGTACCTGAACTTGGGAAGCTTGAGCATTTACAATATCTTGAACTGTACAAAAACAACATTCAAGGAACTATTCCTCCGGAGCTTGGAAACCTCAAGAGTCTTGTTAGCTTGGACTTGTATAACAACAACATATCTGGCACCATCCCTCCTTCACTTGGGAAATTGAAGAATCTTGTTTTTCTTCGACTTAATGACAATCGATTAACTGGCCCGATCCCCAAGGAACTTGTTGGTATATCAAGCCTCAAAGTAGTGGATGTCTCTAAACATAACTTGTGTGGAACAATTCCTACCTCTGGGGCATTTGAGCATATTCCATT


gi|296564720|gb|GW942061.1|GW942061 Dur25.seed.ADAA-aaa36c07.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

AAGCTCAGGAGGGATAGCGCC
|||||||||||.|||| ||||
TTCGAGTCCTCTCTATAGCGG

EST sequence (targeted fragment marked with yellow):
ATGGCACTATTCATCTGAGCTTGTTCATCTGAAACCCTCCCTTAGCTCATCATCATCACCATCCCCAAGTAGTGTCTAGGTCTTCATGGTGTCTTGTTCAGTGCACGAAATGCCATCGGTGTCCATTGTAATGGCGCCTCCTCCACGAGGTGAAGGCTGTAAAATTCAAACAGAAATGCAACAAGTGTGGTAGATGCTATGGCGATATCTCTCCTGAGCTTATTCTTCTTACGTTTTTATTTTAATTTTTTTAACTTTATAAATAATATTCAAGTTTTCTTGACCTTGCAAGTCCAATCATTTTAAAAGATCTGGTCAAGATTACTTGTAATATTTCAGCAGCAAACACTCATAGTGCAAGCTGTTGCTGATACTTACGAACTTTAGGATACTAAAATATTCTGTGGATTATATTTGTAGGAAGGTTTCAATAAGAAGTATGATATGTAAAACTAGCAAGATTCGTTCATATGTTGGAAGTTAGTAGAAGAGATTAGTAGTTATGTTTTGTTTTGCAGTCGTTTACAAAACAATTTTTTGTATGTGTATGAAGATGTGAATGA


gi|296558332|gb|GW946234.1|GW946234 Dur25.seed.ADAA-aaa85f06.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

AAGCTCAGGAGGGATAGCGCC
|||||| |||||.||||  ||
TTCGAGGCCTCCTTATCAAGG

EST sequence (targeted fragment marked with yellow):
TCTCATAAAGATTCTCTCTTTCTCTCTCGATTTAGTTTCTGCCTTGAGCTCCTTCTTCTTCCTCTTTCTATTATTATTTTCCACCAAACGCAAGCACAAGAAACCATCCCGAAACCCGAACCCTAACTCAATTCGAATTCCAATTCCGATTCCAATTCAACTACCACGGGTTCAGATCAAACGCTAACTGCTTCGTTTTCACACCATGGAACTACAATCCCTATTCTTCACGTTCCTCTTCTGCTTTTCGCTAGCCCTAACCGCCGTTCACCTCGCCGCCGCCAATTCCGAAGGTAGACGCACTCTACACTCTCAAACGGAGTCTCTCCGAGCCCGATAACGTTCTCCAGAGGTGGGATCCAAGACTTGTTAGCCCCTGCACTTGGTTCCACGTCGCCTGCAACCATAACAACCGCGTTACTCGAGTGGATCTCGGTAACTCTAACCTATCTGGACGTTTGGTACCTGAACTTGGGAAGCTTGAGCATTTACAATATCTTGAGCTGTACGAAAACAACATTCAAGGAACTATTCCTCCGGAGCTTGGAAACCACAAGAGTGTTGTTATCTTGAACTTGTATAACCACAAGATATCTGGCACCGTCCCTCGTTCACTTGGGAA


gi|296562715|gb|GW947131.1|GW947131 Dur25.seed.ADAA-aaa96d02.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

AAGCTCAGGAGGGATAGCGCC
|||||| |||||.||||  ||
TTCGAGGCCTCCTTATCAAGG

EST sequence (targeted fragment marked with yellow):
ACTGCTATGTTATTCCCAAAGCCGATACTCTCTTCTTCTCTCATAAAGATTCTCTCTTTCTCTCTCTATTTAGTTTCTGCCTTGAGCTCCTTCTTCTTCCTCTTTCTATTATTATTTTCCACCAAACCCAAACACAAGAAACCATCCCAAAACCCAAACCCTAACTCAATTCCAATTCCAATTCCAATTCCAATTCCACTACCACGTGTTCAGATCAAACGCTAACTGCTTCGTTTTCACACCATGGAACTACAATCCCTATTCTTCTCGTTCCTCTTCTGCTTTTCGCTAACCCTAACCGCCGTTCACCTCGCCGCCGCCAATTCCGAAGGTGACGCACTCTACACTCTCAAACGGAGTCTCTCCGACCCCGATAACGTTCTCCAGAGCTGGGATCCAACACTTGTTAGCCCCTGCACTTGGTTCCACGTCACCTGCAACCAGAACAACCGCGTTACTCGAGTGGATCTCGGTAACTCTAACCTATCTGGACATTTGGTACCTGAACTTGGGAAGCTTGAGCATTTACAATATCTTGAGCTGTACAAAAACAACATTCAAGGAACTATTCCTCCGGAGCTTGGAAACCTCAAGAGTCTTGTTAGCTTGGACTTGTATAAACAACAACATATCTGGCACCATCCCTCCTTCAC