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mature miRNA: ATAGCTGAAGAAGGAGAGGCT
species: Arachis duranensis
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|296569007|gb|GW952694.1|GW952694 Dur25.seed.ADAA-aab62e03.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

ATAGCTGAAGAAGGAGAGGCT
||||||||||||..|||.| |
TATCGACTTCTTTTTCTTC-A

EST sequence (targeted fragment marked with yellow):
ATGACTAAAGGAGTCGTGCTTCCGAATTGCTCCAAATTCCCAAGCGTATCTTTCACCGCCCCTTTAGGATTTGTTCCTCACTCATTGATTCATCTCCAATTAAAGCTTCTTTCCAGAGCCGCTGAAAAATTAAAGATCTAATGGCAGATTGGGCACCAGTGGTAATAGGAGTGGTTCTGTTCGTTCTTCTCCAACCTGGTTTGCTTTTCTCGTTCCCTGGAAATGGAAAGCAGCTTGAGTTCGGTCGCATGAAGACCAACGGCAAAGCCATTTTCATTCACACTCTCATCTTCTTCGCTCTCTATTCCGCCATCATCGTCGCCCTTAAGGTCCACATCTACACGGGTTAATACAGATCTCTCTTTACTTCTTTTTCTTCAGCTATATTTGCCTATCGTGGATTTTCAAATAAAAGCTTTCATTCTGCTCTTTTAG


gi|296577156|gb|GW959392.1|GW959392 Dur25.seed.ADAA-aad88f11.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

ATAGCTGAAGAAGGAGAGGCT
|| ||||||||||.|||.||
TAGCGACTTCTTCTTCTTCGT

EST sequence (targeted fragment marked with yellow):
AATCGAGTGCGATCGAAACTGAGGCTGACACGGCAACCAACCGTTATATCAAAAACGACGTCGTTTTGAGAAAGTCGAACGTAGCAATGGCGTGGGTTGTGGCAAAGCGAGCAGCTGCTGCTTCTTCTTCTTCAGCGATGAAATCGGTTTCTGCTGCGGCGGCTATTTGGATGAGGTCGTACGCCAAGGTTGCGTTGGGGACCGACATAGTCTCCGCCGCACCGAACGTTTCTCTCCAGAAAGCTCGCACCTGGGACGAAGGTGTCTCTTCCAAATTCTCCACCACTCCTCTCAATCACATCTTCAAGGATAAGAAAGTTGTCATCTTTGGGCTCCCAGGTGCATACACAGGTGTTTGTTCAAACAAACATGTTCCTGGGTACAAGGAAAATATTGATAAGTTTAAGGCCAAGGGGATTGATTCTGTTATTTGTGTGGCTGTTAATGATCCATATACTATGAATGCTTGGGCAGAGAAGCTTCAAGCCAATAATGCTATTGAGTTTTATGGAAACTTCGATGG


gi|296570463|gb|GW956197.1|GW956197 Dur25.seed.ADAA-aac04d08.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

ATAGCTGAAGAAGGAGAGGCT
|||||||||||||.|||.|
TATCGACTTCTTCTTCTTCTT

EST sequence (targeted fragment marked with yellow):
TGGAGGTTTACTCAGATGACAACCTTAGTGGGCAAAGTCCCATGAATGCTCTCTCTCTCTCTCTCTTTCTTTCTCTCTCCGTAACCTTCTTCTTCTTCTTCTTCTTCAGCTATTAGCTTTGGCTACCGTGTTTTCTACTCGTTAGGTTTCTAGATTTCAAGAGAGATGGAGGGTGAAGGAGGTGAGAGAGGGACGAGGAAGAGAGTGGCGGAGAGTGGTGGCGGAGAGAGAAGGTATAAAGGGATAAGGATGAGGAAGTGGGGGAAGTGGGTCGCTGAGATTAGAGAACCAAACAAGCGTTCAAGGATTTGGCTCGGTTCATACTCAACCCCTATCGCCGCCGCAAGAGCCTACGACACCGCCGTCTTCTACCTCCGAGGACCCTCCGCCCGCCTCAACTTCCCCGAGCTTCTCGCCGGAGAACCCCCTCCTTCCCTTGTCGGCGCCTGCGACATGTCCGCCGCTTCCATAAGGAAGAAAGCCACCGAGGTCGGCGCCAGAGTCGATGCCCTCCAGGCCGCCACTCTTCACCACCACCACTTAGCTGCGCCGCCGCAGGAGCTTATATCGGGGCGGTCCGGAGATTTTGCGGAGCGGGTTGATTTGAACAAGATACCA


gi|296575090|gb|GW957326.1|GW957326 Dur25.seed.ADAA-aac18c11.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

ATAGCTGAAGAAGGAGAGGCT
|| ||||||||||.|||.||
TAGCGACTTCTTCTTCTTCGT

EST sequence (targeted fragment marked with yellow):
GTTGTGGCAAAGCGAGCAGCTGCTGCTTCTTCTTCTTCAGCGATGAAATCGGTTTCTGCTGCGGCGGCTATTTGGATGAGGTCGTACGCCAAGGTTGCGTTGGGGACCGACATAGTCTCCGCCGCACCGAACGTTTCTCTCCAGAAAGCTCGCACCTGGGACGAAGGTGTCTCTTCCAAATTCTCCACCACTCCTCTCAATCACATCTTCAAGGATAAGAAAGTTGTCATCTTTGGGCTCCCAGGTGCATACACAGGTGTTTGTTCAAACAAACATGTTCCTGGGTACAAGGAAAATATTGATAAGTTTAAGGCCAAGGGGATTGATTCTGTTATTTGTGTGGCTGTTAATGATCCATATACTATGAATGCTTGGGCAGAGAAGCTTCAAGCCAATAATGCTATTGAGTTTTATGGAGACTTCGATGGGAGCTTCCACAAAAGCTTGGATTTAGTTACTGATCTCTCTAGTGCTTTGCTTGGAACTCGATCCAAGAGGTGGTCAGCATACGTGGTAGATGGAAAAGTGAAGGCTTTTAATGTTGAAGAAGCTCCATCCGATGTCAAGGTTTCTGGTGCAGACACCATTTTGGGACAGATTTGAAGATCATGTTTATTTGGACAGTTGTGTAATGTAACGAGTTCTCAATAAAAATGCACCCTTGTGCTTCTAGTTGACTGAACTGGGAGTTCGTTTGTTTTTTAGTTTTGATTATTG


gi|296556879|gb|GW938377.1|GW938377 Dur25.root.ADAA-aag06h03.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence 

ATAGCTGAAGAAGGAGAGGCT
|| ||||||||||.|||.||
TAGCGACTTCTTCTTCTTCGT

EST sequence (targeted fragment marked with yellow):
AACCGTTATATCAAAAACGACGTCGCTTTGAGAAAGTCGAACGTAGCAATGGCGTGGGTTGTGGCAAAGCGAGCAGCTGCTGCTTCTTCTTCTTCAGCGATGACATCGGTTTCTGCTGCGGCGGCTATTTGGATGAGGTCGTACGCCAAGGTTGCGTTGGGGACCGACATAGTCTCCGCCGCACCGAACGTTTCTCTCCAGAAAGCTCGCACCTGGGACGAAGGTGTCTCTTCCAAATTCTCCACCACTCCTCTCAATCACATCTTCAAGGATAAGAAAGTTGTCATCTTTGGGCTCCCAGGTGCATACACAGGTGTTTGTTCAAACAAACATGTTCCTGGGTACAAGGAAAATATTGATAAGTTTAAGGCCAAGGGGATTGATTCTGTTATTTGTGTGGCTGTTAATGATCCATATACTATGAATGCTTGGGCAGAGAAGCTTCAAGCCAATAATGCTATTGAGTTTTATGGAGACTTCGATGGGAGCTTCCACAAAAGCTTGGATTTAGTTACTGATCTCTCTAGTGCTTTGCTTGGAACTCGATCCAAGAGGTGGTCAGCATACGTGGTAGATGGAAAAGTGA