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mature miRNA: GTGCTCTCTATTCTTCTGTCA
species: Arachis duranensis
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|296563410|gb|GW944266.1|GW944266 Dur25.seed.ADAA-aaa62f08.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

GTGCTCTCTATTCTTCTGTCA
||||||||||| |||||||||
CACGAGAGATA-GAAGACAGT

EST sequence (targeted fragment marked with yellow):
AACACAAAGCATTCCATATAGTTTCCAAGCTATCTTTCTTCTCTCTTTCATTTATTCTAATTCTTTCACTGTGTTAAGTTCTTTGGAGGAAGATGAGAGAAGGAATGAAGGAGGCACTATTGGTAGAGTTGTTGACAGAAGATAGAGAGCACAAAAGATGATATGCATATAGATATATATAGTCACATACATACACATATACACATATGGATGGATCCAAAGCCAATTGCATTTTATTCCTTTGTGCTCTCTAAGCTTCTGTCATCACTCTTCAGCCTCTATTTCTATCTCACACTCTCTCCCATTATGCTCTAATTCTAGTCTTATCATGTGCTTGAATATCTTTTACTCATCTTAAATAGTTAAATGTTAGTTAAATTTTTTTGGCTGAACCAACAAGCAAATGATTTTGTTTCACATGTCCATGAAGAAATTAATTAAACTTTGATTGTTCTTCTCAAAATCACAGTTTGATTTCACTATATTATGAGTTTGTTGTTATGGGTTCCTTGTATAAAAA