miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TCGGACCAGGCTTCATTCC
species: Arachis duranensis
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|296550267|gb|GW930331.1|GW930331 Dur25.root.ADAA-aae82d10.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence

TCGGACCAGGCTTCATTCC
|||.||||.|||.| |.||
AGCTTGGTTCGAGGAAGGG

EST sequence (targeted fragment marked with yellow):
AAGTCAATAAAGGAAGAGGCAAGCGAAGCGAAATTTCAAGTTGAAGGGAAGGAGCTTGGTTCGAAGGAGGAGTTGTTGTTGGCGTAAGCAGAGGAGAAGAGAGGAATCCGTACAAGTTCAAGAAATCGATTGAGAATTTGAGATTGTTGTTGTTATCCATGAAGAGCTCTCTGAACAAGTTGCGCGGGTTGGCGCTTCACAACCACAAGGAACGCCGCACCGCCACCGCCGCCAGAGCTGTTCTTCCGCTTCCCAACGTTGACGAGCTTGCTCAGGCTGCTCAGGACTTGGAAGACATGAAAGACTGCTACGATTCCTTACTTTTCCGCAGC