| mature miRNA: TGCACTGCCTCTTCCCTGGCT species: Arachis duranensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|296550316|gb|GW930380.1|GW930380 Dur25.root.ADAA-aae83a12.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): CGCTTTGGAGAGTACATACAAAAATGTCTAAGGGAAGAGGCAGTGCATCTCTACTTATGGTTATGGCCACCTTGATCCCTCTTATGTGTCTGCTGTTTCTAGTGAGACCTTCAAATGCAGCCACTTACACTGTTGGAGGACCTGGTGGATGGTCCTTCAACACAAATTCTTGGCCCAATGGAAAAAACTTTAGAGCTGGTGACGTGCTAGTTTTCAACTATGATTCAAGCACACACAACGTGGTTGCTGTGGATAGAATTGGATACAGCAGTTGCAGGACCCCAAGAGGTGCAAGAGTGTTCAGATCAGGGAAGGACCAAATCAAGATCGCAAGAGGTGCAAATTACTTCATATGTAACGTCCCTGGTCACTGTGAATCTGGCATGAAAATTGCCATCAATGCAGCTTGAATGGGATGGCCACTAGTAGCATGACTACAAGTGATGTTAATTAATTAAATGTATGC | |||||||||
gi|296570076|gb|GW955810.1|GW955810 Dur25.seed.ADAA-aab99g09.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): ATCAAAACCAAAGCATAACTCTTTAATCTGCTTTCCTTACTTTTCCTTCCCTTCTCATTTTTTCTTTCTCTTCAAAATGGTTTTCTCTGAAGCATTGGTTTTGGCACTCTTGCTAGCAATGAACATGGCCTTGCCAACCATTGCAACTGTTTACACTGTAGGAGATACCTCAGGTTGGGCCACTGGTGGTGATTATAGCACTTGGGCTAGTGGCAAGAACTTTGTAGTTGGTGATAGCCTTGTTTTTAACTACGGATCCGGGCACACGGTGGACGAGGTGAAAGAAAGCGACTACAAATCATGCAGCACAGGGAATTCCATTAGCACAGATAGCAGTGGCGCCACCACCATACCTCTCAAGACTTCAGGCACACATTACTTCATTTGTAGTGTTCCTGGACACTGTTCTGGTGGAATGAAGCTTGCAGTTACTGTCAAGGATGGAAAATCATCATCATCCACCACTACTCCTTCTTCTTCTGGAAAGGGTTCACCACCTTCCTCAACAACAGCCACACCAAAATCCAATGCATCTTCTTCAGTGAGTAGGGTCACTCCAATTGTTGTGTTGATTGTTTCTTTTGATCTCATGCTGTGTTTTGAATATGGTATGAGTTTGTGAGTGCTTAGAGATTTATAGCCAGGTCAGAGGCAGTGCTTTCCATGGTTACTTTCTTGTTTTC | |||||||||
gi|296568791|gb|GW952478.1|GW952478 Dur25.seed.ADAA-aab59h12.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): ATGGCCTTGCCAACCATTGCAACTGTTTACACTGTAGGAGATACCTCAGGTTGGGCCACTGGTGGTGATTATAGCACTTGGGCTAGTGGCAAGAACTTTGTAGTTGGTGATAGCCTTGTTTTTAACTACGGATCCGGGCACACGGTGGACGAGGTGAAAGAAAGCGACTACAAATCATGCAGCACAGGGAATTCCATTAGCACAGATAGCAGTGGCGCCACCACCATACCTCTCAAGACTTCAGGCACACATTACTTCATTTGTAGTGTTCCTGGACACTGTTCTGGTGGAATGAAGCTTGCAGTTACTGTCAAGGATGGAAAATCATCATCATCCACTACTACTCCTTCTTCTTCTGGAAAGGGTTCACCACCTTCCTCAACAACAGCCACACCAAAATCCAATGCATCTTCTTCAGTGAGTAGGGTCACTCCAATTGTTGTGTTGATTGTTTCTTTGATCTCATGCTGTGTTTTGAATATGGTATGAGTTTGTGAGTGCTTAGAGATTTATAGCCAGGTCAGAGGCAGTGCTTTCCATGGTTACTTTCTTGTTTTCTTGTGTTATCATTGTTATTCTGTTTTTTGTTTGATCTATTCTGGTTTAATTCTCTGAGTATATTGTGATCTATTCAGGTTCTTGTTAGTAGGAGGTCTTGTTTATAGTTTGGT | |||||||||
gi|296575537|gb|GW957810.1|GW957810 Dur25.seed.ADAA-aad68b10.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): CACACAAAGAATCTTTCACCTTCAGTGTGCTACTTATATTGTTAATTATAGCCAAGATCTGCATCACTTTGGAGAGTACATACAAAAATGTCTAAGGGAAGAGGCAGTGCATCTTTACTTATGGTTATGGCCACCTTGATCCCTCTTATGTGTCTGCTGTTTCTAGTGAAACCTTCAAATGCAGCCACTTACACTGTTGGAGGACCTGGTGGATGGTCCTTCAACACAAATTCTTGGCCCAATGGAAAAAACTTTAGAGCTGGTGACGTGCTAGTTTTCAACTATGATTCAAGCACACACAACGTGGTTGCTGTGGATAGAATTGGATACAGCAGTTGCAGGACCCCAAGAGGTGCAAGAGTGTTCAGATCAGGGAAGGACCAAATCAAGATCGCAAGAGGTGCAAATTACTTCATATGTAACGTCCCTGGTCACTGTGAATCTGGCATGAAAATTGCCATCAATGCAGCTTGAATGGGATGGCCACTAGTAGCATGACTACAAGTGATGTTAATTAATTAATGTATGCTTATTAGCGTCATCATTGCATGTTGATAATAAATTAAGAGATGCCAAAATCCGATCAG | |||||||||
gi|296570318|gb|GW956052.1|GW956052 Dur25.seed.ADAA-aac02f12.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): ATTATCAAAACCAAAGCATAACTCTTTAATCTGTTTTCCTTACTTTTCCTTCCCTTCTCATTTTTTCTTTCTCTTCAAAATGGTTTTCTCTAAAGCATTGGTTTTGGCACTCTTGCTAGCAATGAACATGGCCTTGCCAACCATTGCAACTGTTTACACTGTAGGAGATACCTCAGGTTGGGCCACTGGTGGTGATTATAGCACTTGGGCTAGTGGCAAGAACTTTGTAGTTGGTGATAGCCTTGTTTTTAACTACGGATCCGGGCACACGGTGGACGAGGTGAAAGAAAGCGACTACAAATCATGCAGCACAGGGAATTCCATTAGCACAGATAGCAGTGGCGCCACCACCATACCTCTCAAGACTTCAGGCACACATTACTTCATTTGTAGTGTTCCTGGACACTGTTCTGGTGGAATGAAGCTTGCAGTTACTGTCAAGGATGGAAAATCATCATCATCCACTACTACTCCTTCTTCTTCTGGAAAGGGTTCACCACCTTCCTCAACAACAGCCACACCAAAATCCAATGCATCTTCTTCAGTGAGTAGGGTCACTCCAATTGTTGTGTTGATTGTTTCTTTGATCTCATGCTGTGTTTTGAATATGGTATGAGTTTGTGAGTGCTTAGAGATTTATAGCCAGGTCAGAGGCAGTGCTTTCCATGGTTACTTTCTTGTTTTCTTG | |||||||||
gi|296543200|gb|GW926508.1|GW926508 Dur25.root.ADAA-aae16b03.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): ACATACAAAAATGTCTAAGGGAAGAGGCAGTGCATCCTTACTTATGGTTATGGCCACCTTGATCCCTCTTATGTGTCTGCTGTTTCTAGTGAAACCTTCAAATGCAGCCACTTACACTGTTGGAGGACCTGGTGGATGGTCCTTCAACACAAATTCTTGGCCCAATGGAAAAAACTTTAGAGCTGGTGACGTGCTAGTTTTCAACTATGATTCAAGCACACACAACGTGGTTGCTGTGGATAGAATTGGATACAGCAGTTGCAGGACCCCAAGAGGTGCAAGAGTGTTCAGATCAGGGAAGGACCAAATCAAGATCGCAAGAGGTGCAAATTACTTCATATGTAACGTCCCTGGTCACTGTGAATCTGGCATGACAATTGCCATCAATGCAGCTTGAATGGGATGGCCACTAGTAGCATGACTACAAGTGATGTTAATTAATTAATGTATGCTTATTAGCGTCATCATTGCATGTTGATAATAAATTAAGAGATGCCAAAATCCGATCA | |||||||||