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mature miRNA: TTCCACAGCTTTCTTGAACTT
species: Arachis duranensis
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|296560442|gb|GW939963.1|GW939963 Dur25.seed.ADAA-aaa09e06.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

TTCCACAGCTTTCTTGAACTT
|.||||||||||||||| |||
AGGGTGTCGAAAGAACTCGAA

EST sequence (targeted fragment marked with yellow):
TCTTCTCCTTTCTATACCAATGCTTCACCATTTCTTCATCCTTCCTTCCTTCCTTCATTCATTCATTCAACAGATCTGAGTCCTGGTCATGCTTTTCCACAGCTTTCTTGAACTTCTTGTATGTGCATCCATCCATCTCAACTTCTTCTAAGTAAGTATGTAATTACAGTCTTATCCCTACAACTAATCAAGAAGCTCAAGAAAGCTGTGGGAGAATATGGCAATTTCAGGCCTTTCTTGTATTTCTCTACTCTGATTCTCTCAACATCGGGAAATAGTGGAAAAATAAAGAATCAACACTTTGAGCAACGGGCACACGAAACCCATGAAGCAGCTTTGTGAATTGTGACACGACATCGTATGAGTTACCAGAGATTCAGCTGTAAGTAACTGATCATGGATGCTTGGTGATTGGTGACCTGAACCCTTCAATGACACTCATGAAAAGATGAAACTGAATCATCAGATAATTTTCCTAGTACGGAATTATTCTTGCTTTCAAACTATAACACCACTGTTCAACTTTTTTAC


gi|296571996|gb|GW950704.1|GW950704 Dur25.seed.ADAA-aab38f06.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

TTCCACAGCTTTCTTGAACTT
|||||||||||.||  |||||
AAGGTGTCGAAGGACGTTGAA

EST sequence (targeted fragment marked with yellow):
ACAACTGGCTGCATTGCATGCTCTAGGAAACATATCTGGAGAGACACGGTCTGAGAACATTATACTCAATGCTGAAGCTGAAGAAAACCTACGACGCATGGTCTATGAGGCTGCATCCAAGAGCTCAAAGCTGACTCCATCGGGTCTATTTCTGTCTGTTTTGCATCAGGATTCGGAAATACGCTTAGCGGCCTATAGAATGATTAGTGGATTAGTTGCCCGATCATGGTGCTTAATGGAGATATGCTCGAAACAAGAGATCATAAATATAGTGACCGATCCAAGTACCGAAACAAAAAAAATAGGCATGGAAGCCAGATATAACTGTTGTAAGGCAATACACAAATCATTGATGATGTCTAGCAGAGTTTCCAGTGATTCTGCTTTTGCTGGTATAGCTACAAAGTTGCAGGAAGCTGTGGAAAAGGGTCCTTATCTGATTAAGAAGCAGGTCGAAGCTCAGCCTGTAGTGATGACGGCTGAGAGATTTTAGATTTACATCATGGAGATTTTAGTTTTATACCATAGTTTTATAGAACAGAACTTTTTTGTTTAGTGTTGGAACGTAGAGTATGTTGGCTATTGCTTAATTTCTGGAGTAGACTGTATATCTTCGCCTGTGCCCAGTAGTATGTTAGAAATGTCTAACTATTTTATCAGTAGATTTTTTTCATC


gi|296546532|gb|GW924946.1|GW924946 Dur25.root.ADAA-aad12f04.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence 

TTCCACAGCTTTCTTGAACTT
||||| |||||  |.||||||
AAGGTCTCGAACAAGCTTGAA

EST sequence (targeted fragment marked with yellow):
AAGGAATCAGAAGGAAAACGAAAGACGAGAGAGAAATAATTTTACTGGAAAATTCAACTTCGAGATCGAATCGGAGAAGATGAGTAATCATAGGGTTCTGCTCTTGTTCTTGGTGACGTGGATCTCCCACTGCGAAGAAGTGTTGAGCTCGTACGCTGGTTCGGCGAGCTCCATCATCAACCCTTCCAAGGTCAAACAGATTTCATGGAATCCAAGAGCTTTCGTTTACGAAGGTTTCCTCACCGACCTGGAATGCGATCATCTGATCTCTTTGGCGAAATCAGAGCTTAAGAGATCTGCTGTAGCAGATAATCTTTCTGGAGAGAGTCAGTTGAGCGAAGTTCGAACAAGCTCTGGAATGTTCATTCCCAAGGACAAGGATCCTATTATTTCTGGCATTGAGGATAAGATTTCGTCGTGGACCTTTCTTCCGAAAGAAAATGGAGAAGACATTCAAGTATTGAGGTATGAGCATGGGCAGAAATATGATCCGCATTATGACTACTTCTCTGACAAAGTTAATATAGCTCGAGGTGGACACCGTGTTGCAACTGTTC


gi|296573033|gb|GW953877.1|GW953877 Dur25.seed.ADAA-aab76g11.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

TTCCACAGCTTTCTTGAACTT
||| |||||||.| |.||||.
AAGATGTCGAAGGTATTTGAG

EST sequence (targeted fragment marked with yellow):
ACACTTTCACTTCGTACCTTTCCCCTTGCACCTTTTCCCACTTCTTCTTCTTTCTCTTCAACTTCCCTTTCCTCCATTCTTTAAAGGTAATAATTAAGTTCTTCTTGCTCTGTAACTACATGCATTATTATTCATATATAATATATGCGCATTCTGTTTTTATTCAGAGTTTATGGAAGCTGTAGAAGCAAAATCATCTTCTTCATCTGGGTATGGTAAGCCTCCATGGGG


gi|296572196|gb|GW950904.1|GW950904 Dur25.seed.ADAA-aab40h04.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

TTCCACAGCTTTCTTGAACTT
||||| |||||  |.||||||
AAGGTCTCGAACAAGCTTGAA

EST sequence (targeted fragment marked with yellow):
GATTTGGAAGGAATCAGAAGGAAAACGAAAGACGAGAGAGAAATAATTTTACTGGAAAATTCAACTTCGAGATCGAATCGGAGAAGATGAGTAATCATAGGGTTCTGCTCTTGTTCTTGGTGACGTGGATCTCCCACTGCGAAGAAGTGTTGAGCTCGTACGCTGGTTCGGCGAGCTCCATCATCAACCCTTCCAAGGTCAAACAGATTTCATGGAATCCAAGAGCTTTCGTTTACGAAGGTTTCCTCACCGACCTGGAATGCGATCATCTGATCTCTTTGGCGAAATCAGAGCTTAAGAGATCTGCTGTAGCGGATAATCTTTCTGGAGAGAGTCAGTTGAGTGAAGTTCGAACAAGCTCTGGAATGTTCATTCCCAAGGACAAGGATCCTATTATTTCTGGCATTGAGGATAAGATTTCGTCGTGGACCTTTCTTCCGAAAGAAAATGGAGAAGACATTCAAGTATTGAGGTATGAGCATGGGCAGAAATATGATCCGCATTATGACTACTTCTCTGACAAAGTTAATATAGCTCGAGGTGGACACCGTGTTGCAACTGTTCTCATGTATCTCACCGATGTGACCAGTGGTGGTGAAACAGTGTTCCCTAATGCAGAGGAAACTCCACATAGAAGAGGTTCTGAAAAAGGAACTGATCTCTCTGAGTGTGCCAAAAAGGAATTGCAGTCAAACCGCGT


gi|296571702|gb|GW950410.1|GW950410 Dur25.seed.ADAA-aab35d09.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

TTCCACAGCTTTCTTGAACTT
||| |||||||.| |.||||.
AAGATGTCGAAGGTATTTGAG

EST sequence (targeted fragment marked with yellow):
TAACTACATGCATTATTATTCATGTATACTATATGCGCATTCTGTTTTTATTCAGAGTTTATGGAAGCTGTAGAAGCAAAATCATCTTGGTCATCTGGGTATGGTAAGCCTCCATGGGTATTTAGAGGAAGTGCTTTGTATCAACTTCATCTTGTGAAGGCAGAGAAAGCTAGAAGATACATTCCAAAAGAATTCAAATTGGTTGAAGCTTTTGGATACACTTTGGGTGGCTTCTTTCTAGCCAGCTATGAGGACAGTCCCGCCGGTGTCTTTGACGAGGTACGATTCTCTTTTCATTCTTGCTCTTTTATCTTTCTATTTTAGTTCAAGAGTAGTAATTTTAGTTTTCGTTGGGCGGAAATCTTTGGTAACAGAAAAAAAAAAAAAAATAAAACAGCCAAAACAATTAAAATTTGTGTTATTTAACATTTATTAATTGTGGACAATTAATCAATAGTAAAATAAGTACCCGTTCTTTGGGTAATGTAGCGTTTACCGTTTT


gi|296576599|gb|GW958835.1|GW958835 Dur25.seed.ADAA-aad81f06.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence 

TTCCACAGCTTTCTTGAACTT
|||||||||||| |||| |||
AAGGTGTCGAAATAACT-GAA

EST sequence (targeted fragment marked with yellow):
CCTACAGCCGGGGAATTATTAGTTGTTACATGCATGTTACGGCACACAATGATGGCTTTGGTTCTCCTCACACTTTCAATCTTGGTGCTTCCGGTGGTGTTGCCGCCGCTGCCGCCACCGCCTTTGAGCCTTCTCCTTGTTCCCGTTTTCATCTTGCTGCTGCTATTTTTCTTGGCCTTTTCATCAACACCCTCCAAATTTCCGAGCTTTGCTGTCCTTTTCTCTTCGCTGTATTAGTGATTTTGTGAGATCCAGAACAAAGTCAATAAAGCTGTGGAATCTTGAGTTTGTTTCAGCTTTCTAGGTTGCACGGATTATTCATGTTTTCGCTGTCCATATGGAGAGGTAATGAATTTTGTTCATGATTATTTTCTGGGTTGTTTCATTTAATTTCTTAGATTTTATCGTATCTCCTTTTTAGTTTCATGTATGTTGTGATTATAATTATGATGGAATTAATGGTTTTTCCGAGCGGTGACAATTAACCAGCC