| mature miRNA: AATGTAGAAAATGAACGGTAT species: Arachis hypogaea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|207461134|gb|ES767730.1|ES767730 TFL_40_F08_E001.g1 USDA-Tifton Peanut Library TFL Arachis hypogaea cDNA clone TFL-040_F08 5' AATGTAGAAAATGAACGGTAT EST sequence (targeted fragment marked with yellow): CTGCAGGTTGAAGTCTCAAGTCGTTAGGAATAAAATGGCAACTGCTGGTGTAGCAATTGAGTATAGATGCCTTATCCGTACCATCAATAGGAAAAAGACAATCTCTACTTCGGTAATCGAAAAGCTTGTAGACATTGTGCATTTTTTACATTTGGAGATACATGAAGCATTTGGCAATGTTGGTGCTTTCAAGAACTACAAATAATTGATTATGAGCATTTGGCAGTATGGAATATCTCCTGAGGGCCCCATTTTTTGCACTCAATCTCTGCTGCCTATCCACTAGGGAAGACCATTATTAAAATGTGCATTTTGCTTCTGGCATTTTGTTTTGGAGATGTCATTCTCTTGATTTGTTATTACTTTACTCTTGTGATATTTTAGCCATTTTTAGCTTATTCTTATTTTTGTATTTATCTTGATGTAGAAGCAATATAATTGAGTAGCTTTATGAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|225611840|gb|GO336855.1|GO336855 VBL6_52_C02_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga AATGTAGAAAATGAACGGTAT EST sequence (targeted fragment marked with yellow): GAACGAGATTTGTTAGTGCCAACAGTTGGTTGGGTTGGGTGGAGCTTTGGTTGGATTAATAGGGCATGCAGGAGATGAAATCATGAATCCAGCCCCCACGTTGTTTTCCATGTTTCCAGTCGTCTAAGAAGTATGATTAATTGGATTATCTTATCATTAAAGTTGGATTTATTAGGACAATAAATGGAATCTATGAAATATGTGGCATGAAATAAAAATCGCATTTGGACAGACTGAATATTGTTTAGTTATTCTAAGTTGCAGTTTTTTTTGCCAAATACATAAATGCTATTTATTTTTTATATTGTGCTTTTAGAAGGATGGCATCACAATTTGATTATAAAGGAAATCATTTTTCTGCAAACTTTATAAAAGTTGTTTTAACTGCTTTTTGATGTTAGCTAGTTTTACAAGAAAAGCATGAAAATTTTCATAGGCCTAGTTTGGTAAAGTTTTGACTTTTCAAAATTGCTTATTAAAGCTAGCATTTCAAAGATAGTTTCCAAAAGTTGTAGTAACTATGTTTGATAAATAAAAATAAGTGACTTTCAATAAATACAAACTATAAAACTTGTGTTTAGTAAAATTATTTTTAACATTTAAAATTACTTTAAAAGATATAAATGTAATGAACTGCAAAAATAAATATAAATATTCCTTAATATATAAGGCTATATTAGGTTTTTTAGCTTAAATAGTATAAGCTAATTTTGAAAAGTATTTCATAGGTGCTTCCAAACGCAAAATTTTCAAAGCTGA | |||||||||
gi|225611639|gb|GO338694.1|GO338694 VBL6_58_A20_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga AATGTAGAAAATGAACGGTAT EST sequence (targeted fragment marked with yellow): AAGAAAGACAAAGTGGGAATGGTGTGAGTCAAAAAGCGTAATCATAATAACCACAATATCCTTCATTTTCAACATTCAACGCAACACACTATACATTCATTCATAAACACACACTCACTCATCAAACTCAACAACCAACATGGACCATAACAACTCTGACCTGTTCCAACTGCTTGGTGCCGGTGCCGGTGGTGGGTATTACCCGGCTGCTGCCGTGTTGATGATGGATCATCATCATCAGCATCAGGTGTCCTCTGATGATAACATGAGTGCCATAGAGACACAAGCCTCTCATCATCAACAACAAGATAGAGCACTGGCTGCCCTCAGAAACCACAAGGAAGCTGAGAAGAGACGCAGGGAGAGAATCAATTCCCACCTTGCTCGTCTTCGCACTCTTCTCCCTTGCAACTCCAAGACAGATAAAGCATCGCTTCTTGCAAAGGTGGTGCAGAGAGTGAAAGAGTTAAAACAGCAAACATCAGAAATAATCACCGAATTCGAAACCCTACCCTCCGAAACAGACGAGATCAGCGTCCTTTCCACCGCAGACGGCGGCCACGGAGGGCTGATATTCAAGGCCTCCCTGTGCTGCGAGGACCGCTCCGATCTCATCCCGGAGCTCATAGAGATTCTCAAATCTCTGCACCTGAAGACGCTGAGGGCAGAAATGGCAACCCTAGGCGGAAGAACCCGCAACGTTCTGGTGGTTGCCGCCGACAAAGAACACAACAGCATAGAGTCCATTCATTTTCTTCAGAACTCGTTGAGGTCCTTGCTTGAACGCTCTGGTTCCGCCG | |||||||||
gi|207450787|gb|ES721338.1|ES721338 TFR5_38_A07_E001.g1 USDA-Tifton Peanut Library TFR5 Arachis hypogaea cDNA clone TFR5-038-49_ AATGTAGAAAATGAACGGTAT EST sequence (targeted fragment marked with yellow): ACACACTCTTCTACCAACAACAACAACAACATCATCATCATTTGTTTTTGTTCATTTTCTATATTCTCTCGCTGCAAAGCAAAGCAAAGCAAGGAATATTGTGAAATCCATGGATTCTGACTATGGTATTCCCAGAGAGCTCTCAGATCTTCAAAAGATTCGATCTTTATATGAGCCAGAGATTCCTCCTTGCCTACAGGGAACCACTGTGAGGGTTGAGTTTGGTGATGCAACCACCACTGCTGACCCAGCTGATGACCCAACCATAAGGAGGGCTTTTCCAAACACTTATGGACAGCCTTTGGCTCACTTCCTTAGAGCCACTGCTAAGGTCCCTGATGCTCAGATCATCACTGAGCATCCACCTATCAGGGTGGGGATTGTTTTCTGTGGGAGACAGTCTCCTGGTGGACACAATGTTATTTGGGGTCTTTACAGTGCACTCAAGATTCACAACCCTGAAAATGTCTTGCTTGGATTCCTTGGTGGTTCGGAAGGTCTATTTGCGCAGAAATATCTTGAGATAAATGACGAAATTCTCTCAACATACAAAAATCAAGGTGGTTATGATTTGCTTGGA | |||||||||
gi|224939093|gb|GO267433.1|GO267433 VBL1_42_K15_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi AATGTAGAAAATGAACGGTAT EST sequence (targeted fragment marked with yellow): AATGCGGTTGCCCCAGCTGTTGCCGGAACAGCTCCTCGCAAACCTTCTGGTGCTACGTCTTTGACGATCTCATGCCGGCATCATTGGCACTGTTATTTGTTTCTGCTATTCCAACTTCTAGTAGCCTTCTTATGAGACCTTCACTTTCTTATGTATTTTCATATGTAGCATGTCTAGTGTCTAGATAGCTTTACATGTATATGTATATCCAAATCTGTTAACATTTTGCCCTCCTAGCTTTGTAAGTAATTTAGATCTCACGCCATATAATGCTGTTAGTTTTCAACATTACCAGCATTTAATTCCTTGCGGCTTGTAACGGACCATTTTCTTTTTCCTGTTAACCCCCACTGTTCTTGGGGCGAGGTTATGTAAATTAATTTGCTTCTTGTCCGAAAGAGTAAAGAGTAAAGACCAGCCTATTTACATTCAAATTTGCTATTTTCCTAAAGATTAAGTATAGGAAACTAATTTTTCATTAGCCAAAGTCAATTTTTTTTTTAATTGTAAAAATTGGAGGATCTAAAATTTAGGATTTAGGGTTTAAGATTTATAATTTAAGATAAAAAATATAATTTTTAAAAATTTGGCTGATATTGACTGTAATCGACTTGTTTGCTCACGTTGCAAGTCCTACTTGAAACTCTTGTGAACTGTGCTAAATATTGTGCTTTTTGTGCATCCTCACTTGCCAAATTCTGTATTAAAATAGTCTGAATATAAGTCATTTAAATAGTTCAAGCTATGTCAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|207424484|gb|ES717539.1|ES717539 C20R5_14_E04_E002.g1 USDA-Tifton Peanut Library C20R5 Arachis hypogaea cDNA clone C20R5-014- AATGTAGAAAATGAACGGTAT EST sequence (targeted fragment marked with yellow): CTCGAGTTTTTTTTTTTTTTTTTTTTTAGTAGAAACAAATCATGCAATTACATTCTATTAAAAATTAAATCCTCAAGGAAACTCAATTCAATATTTCAATTAGTAAACAAAATTGAAGTTGTTAATAAAAAAAAAGGTCGACTTCCATGAAATCTTAACTCACTGCAGCAACTTCAGGAGGCATCGGAACGGCAATAACAGAATAGCAGCGGCCGCAAAGTGTAGGGTGGTCTGAGATTGAACCAACCTGCTCTGAATAATTCCAGCATCTTTCACACTTTGAACCGGTAGCACGCGACACACCAATCCATACTTTAGTTCCCTGAATTAGGCATTCACCACTATACGGTATATTTTTTACATTTTCATCATCCAATGAAGGAATAATCTCAGCCTGAGATGTTATGAATAGGCGATGCAATGTATCAGCATCAGTTGTGGCTTCACAAAGTTCAGATAGTTGGGATGCCAGGCTGGCATCAGATGAATAAATGTAAACCTTCGCATCTAAACTAGCACCAATTAGTTTTCCGGTTCGAGCAACCTCCAATACTCTATTCACCTCCGTTCTTAGCTCAAGAATCTTTCCCCAAAATTCAATTTCTTCAACGGGGATGTCAAGCCATTTTTCATTCAAGGCAGGCCATTTTGCTTCAAATACATATTTGGCAACAGAACCATACTCAGTTGTGTACTGAAACGGA | |||||||||
gi|225611153|gb|GO337548.1|GO337548 VBL6_54_F05_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga AATGTAGAAAATGAACGGTAT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAACAATATTTTTATTTATCAAAAACAGAAACTACACAATGGCAGTAGGAAAAGGGCTATCATTCATTCTCTACATTCAAAATCAAACTCCACAAACTCGATAACTTTTAAAAGGGATTACAAAAAACGTTTATTTTTGTTTTTTTCTTTTTCTTTTTCTCTGAAAAAAAACCGTCCCCTATCAGGGACAATTTCCTCACTGTTAAGCTTATTCCTCCATCCGAATGATGCACCTGATGGACTCTCCTTTCAGCATCAAATCAAAAGCCTTGTTAATCTCTGAAAACGGAACAGTGGGAGTGATGAATTTCTCAAGTTCCAACTCCCCTCTCATGTACTTCTCCACAACATTAAGAAAATCGGTTCGGGGTTTGTAGTTACCATAAAAGGGACCCTTGAAAGTCCTCTCATTCAAAAAGTTCGTAAGAAGAATTTTGAAAGCATCATCTTTGCTTGGCACACCAACAGGAACAGCAACACCCCAACCATCATGGACACATTCAAATGCTGAAATCATAGCTTGGATGCTGCCAGTACATTCAAC | |||||||||
gi|225613300|gb|GO341423.1|GO341423 VBL6_65_J22_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga AATGTAGAAAATGAACGGTAT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAACAATATTTTTATTTATCAAAAACAGAAACTACACAATGGCAGTAGGAAAAGGCCTATCATTCATTCTCTACATTCAAAATCAAACTCCACAAACTCGATAACTTTTAAAAGGGATTACAAAAAACGTTTATTTTTGTTTTTTTCTTTTTCTTTTTCTCTGAAAGAAAACCGTCCCCTATCAGGGACAATTTCCTCACTGTTAAGCTTATTCGTCCATCCGAATGATGCACCTGATGGACTCTCCTTTCAGCATCAAATCAAAAGCCTTGTTAATCTCTGAAAACGGAACAGTGTGAGTGATGAATTTCTCAAGTTCCAACTCCCCTCTCATGTACTTCTCCACAACATTAGGAAGATCGGTTCGGGGTTTGTAGTTACCATAAAAGGTACCCTTGAGAGTCCTCTCATTCAAGAAGTTCGTAAGATGAGTTTTGAAAGCATCATCTTTGCTTGGCACACCAACAAGAACAGCAACACCCCAACCATCATGGACACATTCAAATGCTGAGATCATAGCTTGGATGCTGCCAGTACATTCAACAGAACGATCCACACCTCCATTGGTCATTTCAGCAATTACCTCTTGTACAGGTTTGTTATGATCTTTTGGGTTCACAAATTCATTAACCCCAAACTTCTTAGCTAATTCGAATCGGCCGGAAACTAAATCAACCCCAATGATTCTTGATGCACCAAAAATCCTTGCCCCTT | |||||||||