| mature miRNA: ATAATTGAGAGCCGTTAGATA species: Arachis hypogaea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|224929321|gb|GO259532.1|GO259532 VBL1_18_M19_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi ATAATTGAGAGCCGTTAGATA EST sequence (targeted fragment marked with yellow): ACATCCAGGACCGTACAGACAGTTTCATCCCTTTGCAAATGATATGAATGCGAAATTTCAGAATGATTGTTTGCATTGGTGTTTGCCGGGACCAATTGATTCATGGAATGATATTGTACTACAAATGTTGCTCAATGGCAGACCATAGTTTCACACAACGGACAAACTCATCCAACCAAATTGTTTTCATCTTATTGACATAAAAATTAGGCGTAAATTCAGGTGCAGTGAAGTTGATAGGTGAGAACCGTTAAATAATTTAATTGATTTGACTAAATTTTTATCTAACGACTCTCAACTATCAACTTCACGTGAAGTCGACTACACCACCTGAGTTTTCACCAAAAAATTACCAAATTTAACAAGTGAATTTTTGTGTTGCTTTAAACAAAGAAAAATGCTATTTATTCTTTAAATTTTCAGTTTTTTTTATTTAAATAATAATATTTAATTAATTTAAATATCTACTTTTATAAAAAATTACTTATTTTTTTAGTTTTTTTTTCTTCTCAAAATTGAATGATGGATAATTTTTAAAGAATTCTTAATTACACTAAAAAAAAAAAGAGTTCACTTCAGTTCTTCTTAATGTCACCAAACTTCAAACTTTGAAAGAGGTAATTGTTGGGGGAACTTCTTTTTTTGGTTCAAAATCCAACCCAGCAATATGGATGACCAACAATATGGTTTTAGTCCATTTAAGAAGTGATGGTCTCCAATGGCCCACTTCTTGTATGAC | |||||||||
gi|225598704|gb|GO326900.1|GO326900 VBL6_21_C02_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga ATAATTGAGAGCCGTTAGATA EST sequence (targeted fragment marked with yellow): GGTGGCACTTCAAGCACACATAGACATAATTTAAAGAGTTTAACATTAATTAGAAAGAATCCATTAGAAAGATTATTAGAACTATTTGCACTGGCATGCAAGTTGCTATGGAACTTGAAGATGATCTTTTCTTTCAAGATTTGAGCAAGGAAATTGCTCTCTTAATTATGGAAGAAGAAGAAGAAGAAGAACAAGACACTCTTATTATTACTTCTCCTGCAGAATCTCTTCAGGCATTTTCTGGAGCAATATATCCTACTAAACCGCCACAATTTGCATTTTTCTATGGACAATCTTTGAAGAGAGAGAGCAAAGGAACAGGGGTGTTCATCCCACAGGCAACACAACCAAGAAGAAATAAGAACAGAAGAGGGAGATCCAATAATTCATATGCAAAATTTCAAAAGCACTCTCAATTAGATACAACAAGAATGGTTGTTTCTCAACCACCCAACAAGAATTCTTTCAAGCCTTCCCAGAAATAATATTATTATAATGTCTGAGGATTTCAAAAATTAAACTGAATAATTTTGCAAAAGTCTCTCTAATTATTTGATTTCCTGCGCCAGAATTAGTTATTTGTTTGTCAAAATTCTTTAGTCTCTAGGCAATATTTATTATTTGGTGAAAACTCATGTGAAGTCGATTTCACGTGAAGTTGATATCTGAGAACCGTTAGATGAAAATTTAGTCAAATCAGTTAAATCATTTAACGGCTCTCAAGTATCAATTTCACGTGAAGTTGATTGCACCTGAATTTTCATCTTATTATTTATTATTTATGGGGTCTCAATTATTTTATTTTATGTGTAG | |||||||||
gi|207442293|gb|ES719956.1|ES719956 TFR5_6_B06_E001.g1 USDA-Tifton Peanut Library TFR5 Arachis hypogaea cDNA clone TFR5-006-42_B ATAATTGAGAGCCGTTAGATA EST sequence (targeted fragment marked with yellow): TGAGAGGAGAAGAAGAGCGACGACAGCAGCTTCGAGAACTTCAAGTGAATCCAGTGGTGGAGCTCGCGGGGGACGTAGTCGCGGGCCAGGGAACGGAGCAGCATGGTTGTGGCTGCGGCGGAGGCTGCGGCGGAGATCATTGTTTGGACGGAAGGCAGGTGAAGTTGCTTCATCGTTTGGGTTTGGGAATGAGAGTGAGTGAGATAGCAGAGTGGGTTTCAAATTTCATAGTTTCATGGAAGCTTGGGGGTTGACGGAGGTTGACTTTTGTTGTCAACGATGGTATCAAGTCTCACCATTCCACAAGTACCTTGCTTCGCACGCTGCTTCGTTATTCAAAAGTGAAAATTAAGGTACAGTACGGTGAAAAGTTAATAGCAGAGAATTATTAGATGAAAATTTAGTCAAATCAGTCAAATCATTTAACGGCTCTTAATTATCAACTTTATATAAAGTCGACTGTACTTAAATTTTCACTTAACATGTAACTATGAATCACCATTATTTACTGTCATAAGTGATAAAACTTCAATTATTCTTCNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|116359384|gb|EG373188.1|EG373188 XB93 Peanut (Luhua14) seeds full length cDNA Library Arachis hypogaea cDNA 5', mRNA sequence ATAATTGAGAGCCGTTAGATA EST sequence (targeted fragment marked with yellow): GGCTTCCCTTCTTGCTTCTCTTCTCATCATTCAACTTGTTCATGCCGATCACCAGGCATACCAACAAACGCAGGGTTCTCTTCAGCAGATAGACTGTAGCGGAGCATGTGCTGCAAGGTGTCGGTTATCATCTCGTCCAAACCTCTGCCGCAGAGCCTGTGGAACTTGCTGCCAGCGTTGTAACTGCGTGCCGCCGGGCACCGCCGGCAACCAGGAAGTGTGTCCTTGCTATGCTAGCTTGACCACTCACGGTGGCAGGCGCAAGTGCCCTTAATTCCAACCAATTACTTAAAGGTAAAAACTCAGGTGCAGTTGACTTCACGTGAAGTTGATAGCTAAGAATCGTTAGATGAAAATTTAGTCCAATCAATCAAATTATCTAACGACTCTCAGTTATCAATTTCGCATATTTCACGGTAAAG | |||||||||
gi|224931578|gb|GO264681.1|GO264681 VBL1_34_L12_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi ATAATTGAGAGCCGTTAGATA EST sequence (targeted fragment marked with yellow): ACGGGGGTGTTCAGGTTGTAGTCGCCGCTTTTCCAAATGTTTTTGTATTGGTGGAAACTCGGTGCAGTTGATTTTACGTGAAATTGATAGTTGAGAGTCATTAGATGAAAATTTAGTCAAATCAATCAAATTATTTAATGACTTTCAGTTATCAACTTTACGTGAAACACTGAACTGAGTTTTTACTTTTTGTGTTAGCTTGTAAATATTTTGTTATTAGTGGTTTGTTATTAGTGGTTTATGTATTTTTCGCTGGACAACTCGTTCTATTTTTGTATACCTATGCGCCATGTAATAGAATATTCTGAATTTATGGTTTTAAAGTTTAAGTTGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|225614217|gb|GO341831.1|GO341831 VBL6_66_O08_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga ATAATTGAGAGCCGTTAGATA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTGGAGAAAGATTGATTAGCATAATTAAGATTCACGATCACTGGCATCATATATGTCATAGTATGTACAATTAGCAGTAATAGAAAGCAGATGTCACATTATTATTGACTTTGAAACACGAGTGACTTGTGTTATATAAAATATAAGGTGAAAACTCAGTTGTAGTCGACTTCACGTGAAGTTGATAGTTGAGAGCTGTTACATGAAAATTTAGTCAAATCAGTCAAATCATCTATCGACTCTCAGTTATCAACTTCACGTAAAGTCGACTGCACCTGAGATTCCACCAAAATACAAACTAGTTATAGTTATCTCGGCCGTCAATGTCTTCTTATAGTAGGGCCTATGTACTGCCCTCTCTTAACCACCAAGTTCTCCGGCGGTTGGGTCTCCTCTAACCATGTCACTTCAGATGCTTTATCTAACTCAACACTTGGAAGATCTTTGATAGGAGGAGACCTT | |||||||||
gi|207440651|gb|ES768164.1|ES768164 TFL_89_H02_E001.g1 USDA-Tifton Peanut Library TFL Arachis hypogaea cDNA clone TFL-089-16_H02 ATAATTGAGAGCCGTTAGATA EST sequence (targeted fragment marked with yellow): TGAGTTTTATCATCTCTTAAAAAAACACCTCTAACATGTTGATGATGATGATTCCGTCATGGTGATGAAGAACTCAAGCTCTATATTCACATCAAAGGTTATTATGTTTGATGGACGGGTTTAATTTGATTCGGTTCGGTTCGGTTCAATTTGAGGTTCATTTGTTTCTGAGGGGTTTTGAGTGACTAATGACTAGTTTAAGTGCAGTTAACTTCATATCAAGTTGATAGTTCATCATAGTCGTTAGATGACAATTTAAGAAAATTTGTCAAATCATTTAACGACTCTCAACTATTAACTTCACATGAAATTAACTGTACATGAATTTCCATCTCATTTTTATTTGTTTGTATTTTGTAAGGAGTAGATATTAGTCACGGATTTTAAATTTAGTAATTCATTTCTAGTATATATATATATATATATATATAGGTGGTGAAAATATGAATATGAAGAATATGGAAGTATGAGCAAAATTCAAATTGTGTACATGTACATACAATAAGCTAATACAAATATTATTTGTTGTGTATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|225600890|gb|GO329841.1|GO329841 VBL6_2_G23_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypogae ATAATTGAGAGCCGTTAGATA EST sequence (targeted fragment marked with yellow): AAATGGCACATGGCTGTGAAAAAAAAGCATGGAGAGAGGCTAGGGAAGTCCAAGGCACGAGCCTTGGACGAAGGAAGCACCATTGGTTCGACGGTGCATTCTTCAGGACCAATGCTACACCGCTTCAAAACCACCGGCCACTCGACACGGCACACTTCATCCTATGAGGACCATGATGATGACGAAGATTATCAATCTGAGACTGAATTGTCTCCCATTACTCCAAGATCAAGCTTGATAGTGAGAGTGGATAATGGTGACCAGCAAGAAGAAATAGCAAGAGAAAATAGGCACCCCACTGTTGGAGAACAAACCAATAATGGTTTTGGAGGTTAATCTATTAATCTCCCATCCCTCCTTTAATTTTTTTAAACGTATTTATACATCGGCGAAAACTCTGTACAGTTGTCTTGATGCGAAGTTAGTTGAGAACTGTTAGATGATTTGACATGTTTGACTAAATTATTATTTAACCACTCTCAACTATCAACTTCACGTGAAAACAACTATACGTGAGTCTTCACCTTATATATCTCTTTGTAGATAGGAATATATAATTCACTTTTGTATATTGTAATATATATTAGTCTTTTGAATTTGTGGATAGAACATCAAAATGTGAAATAATCTATCCTTCACAGTGAAATAGTTAAAAATCAAAGAACCAGTCATTTACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|149644847|gb|ES753242.1|ES753242 C20L_25_C01_E002.g1 USDA-Tifton Peanut Library C20L Arachis hypogaea cDNA clone C20L-025_C01 ATAATTGAGAGCCGTTAGATA EST sequence (targeted fragment marked with yellow): CTCTTGTAGAAACCCCTAAGTCGAAATGTAATGTATTTCTAGTTTGGTGAAAATTCCCATAACTTCACATGAAGTTGATAACTGAGAGTTGTTAAATAATTTGATTGATTTAACTAAATTTTCATTTGACGGCTCTCAATTAT | |||||||||
gi|224932846|gb|GO261329.1|GO261329 VBL1_24_G23_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi ATAATTGAGAGCCGTTAGATA EST sequence (targeted fragment marked with yellow): AACACATACATACTTCTTCAAATAAAAATGGCTCTCTCTAAGCTTCTACTTGCTTCCCTTCTTGCTTCTCTTCTCATCATTCAACTTGTTCATGCCGATCACCAGGCATACCAACAAACGCAGGGTTCTCTTCAGCAGATAGACTGTAGCGGAGCATGTGCTGCAAGGTGTCGGTTATCATCTCGTCCAAACCTCTGCCGCAGAGCCTGTGGAACTTGCTGCCAGCGTTGTAACTGCGTGCCGCCGGGCACCGCCGGCGACCAGGAAGTGTGTCCTTGCTATGCTAGCTTGACCACTCACGGTGGCAGGCGCAAGTGCCCTTAATTCCAACCAATTACTTAAAGGTAAAAACTCAGGTGCAGTTGACTTCACGTGAAGTTGATAGCTAAGAATCGTTAGATGAAAATTTAGTCCAATCAATCAAATTATCTAACGACTCTCAGTTATCAATTTCACATATTTCACGTAAAGTTGACTGTATCTAAGTTTTCACCTTACTTAAATCCATGCATGTGTATATTACTCCATCACCACGCTCTCAATAAACTTATGGAAGAATAATAATTATTTACTCGTTTTTTTTGTTCAATCCTTGTTGAATCAATAATCATTATTGTGCGAATTTGGTGGTTTCGTTTTCTTTTTATTTTGTTTATATATGTACCTTAATTTGCTGTACGGTTGTATCAATTATGTTATTAA | |||||||||
gi|224937236|gb|GO266540.1|GO266540 VBL1_3_L14_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachis ATAATTGAGAGCCGTTAGATA EST sequence (targeted fragment marked with yellow): CATCTAATGACTCTCAAATATCAACTTCACGTGAAGTCGACTTCACCTGAATTTTCACCTTAGTTTATTAGGTAAATTACTATGATCACTTATTTATTGTACAAAGACTTTGCCTATATTTTAATCAGTATATATATATTACAAATAAATAAATAAATAAATAAAACTTCGATTTTGACAGAATCATTATTATTTGAACAATGTTAGTTTGAATAACCCAAATTATTCAAACATATATAACACCATTCAATTCTTTGGTCTATTCTCTACACATTCTTAATACATAAACAATGTAACTTCAATCAATTCCATTCTCTTCCATAGACCATGGTTCCATCCCATAAATTCAATACCATTTATTACTTGGTGCTAGTACTAGAACAACAAAGTGTTACAAAGGTTTTGGACCTGTTATGACCAGGACAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|225596132|gb|GO324369.1|GO324369 VBL6_14_G03_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga ATAATTGAGAGCCGTTAGATA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAAGAAAGATTGATTAGCATAATTATTAATTAAGATTCACAATCAGTGCCATCATATATGTCATAGTATGTACAATTAGCAGTCATAGAAAGCAAATGTCACATTATTATTGAATTGAAACACGAGTGACTCGTGTTATATAAAATACAAGGGGAAAATTCATATGCAATTGACTTCACGTGAAGTTGATAGCTGAAAGCTGCTAGATGAAAATTTAGTTAAATCAATCAAATCATCTAATGACTCTCAGTTATCAACTTCACGTGAAGTCGACTACACTTGAGTTTCCACCAAAATACAAACTAGTTATAGTTATCTCCGCCGTCAATGTCTTCTTATAGTAGGGCCTATGTACTGCCCTCTCTTAACCACCAAGTTCTCTGGGGGTTGAGTCTCCT | |||||||||