| mature miRNA: ATCTAACGACTCTCAGGTATC species: Arachis hypogaea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|149645822|gb|ES754217.1|ES754217 C20L_41_B03_E002.g1 USDA-Tifton Peanut Library C20L Arachis hypogaea cDNA clone C20L-041_B03 ATCTAACGACTCTCAGGTATC EST sequence (targeted fragment marked with yellow): ATGGCTGCCGCTCTCAATCAAATGGTCTTGGAGGGAATCATAAAAGAAGAGCAAATGGATGCTTTCAACATCCCACAATATACACCGTCCCCATCGGAAGTGAAACTTGAAGTTCAAAGCGAAGGATCCTTCACCATCAACCGCCTAGAGGTGTCTGAAGTGAATTGGAATGCTTATGAAAACAATTGGAACGCCATGGATTCCGAATCGGAAGAATTCGAATCACTCATCGATGGCGGATACAATGTGGCGCAGTGCATGAGAGCCGTTGCTGAACCCTTGCTGGTTAGCCACTTCGGTGAAGATATCATTGAAAACGTGTTTAGTCGCTACCAGACGCTCTTAACTGACAGTATGTCTAAGGAGAAGACCAAGTTTTTCAACGTCACTGTATCGTTGACCAGGAACGCATGAACAACAATCCCTTTCTTCACAAAATAAGGAGGAAATTCACCTACAGATTCTCTTCTTATAAACAATTAATAATTAAAATAAGATGAAAATTCAGGTGCAGTCGACTTTACGTGAAGTTATAACTGAGAGTGGTTAGATGATTTGACTGAGATTGATTTGACTAAATTTTCATCTAACAGTTCTCAACTATCAATTTCACGTGAAACTGCATCTGAATTTTCACCATAATTTAATCAAATGTTATTAAATTATTCAACTGTACGTGAGTTTTCTTTTCAAA | |||||||||
gi|225595257|gb|GO323831.1|GO323831 VBL6_12_M05_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga ATCTAACGACTCTCAGGTATC EST sequence (targeted fragment marked with yellow): GAAGCTAATCAAGTTTCATTCAAACACACACCACCTTACTACTCCATTGAAATAATGGACAAGGATCTCAGCAGCACAGTAACAACAACAGTGATGCACTCTTCTTCTTCTTCTTCTTCTTCTTCATACATGATGATGTCTTCTCCTTCTTGCTGCTTCCCAATCCAGAACGAGTTCCAGTACTCAAGAATCCACCATTTCAGTAACACTTGTAGTTGTTGTTGTTGCTGCAGCAGCAGCAGCACTATGAAGAGGAGGAGAGGATGGAGATGGAGAAGCATCCTCAGAAGGCTCATGAGGGAGAGCAAGACCTCCTTGATGTGTAGATCCAATAAACCTGTTTCGTTTCAGTATGATCCTGTTAGTTACTCTCACAACTTTGATGAAGGTAGTTTCCATCTTCACCGCCACCAGGAACCTTCACAACTAGTGTTTCAAGATCATAGGTAATAATAATAATTAAGATTTCAATGTAAATCTATTTTCAAGATTATTTAATTATATATGTTTGCCTTTAATCAAAATGGATCTACTGCGTTTGTTAACTGTCTCGACACAGAAATACAAAAAAAATTTGTATTTTTATTTGGTGAAAAGTCAGTCGATTCCGTGAAGTTGATAATTGAGAGCCGTTAGATAAAAATTTAGTCAAATCATCTAACGAATCTCAGTTATCAACTTCATGTAAAGTCGATTGCACATGAGTTTTTACCTTTTTATTTTTGTACCATCTTTCGTCTCTNATTTTAATTTTGAATAGAAATATTTCGTTCTTTTATTATAGAGCAATGCTAGGGGGCCAGCAATTTTTGTGATTGTTAG | |||||||||
gi|224932392|gb|GO264139.1|GO264139 VBL1_33_A04_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi ATCTAACGACTCTCAGGTATC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTCATAAAACATGAAATAGTAAACTCTTTTATTAATAACATAATTGATACAACCGTACAGCAAATTAAGGTACATATATAAACAAAATAAAAAGAAAACGAAACCACCAAATTCGCACAATAATGATTATTGATTCAACAAGGATTGAACAAAAAAAACGAGTAAATAATTATTATTCTTCCATAAGTTTATTGAGAGCGGGGTGATGGAGTAATATACACATGCATGGATTTAAGTAAGGTGAAAACTTAAATACAGTCAACTTTACGTGAAATATGTGAAATTGATAACTGAAAGTCGTTAGATAATTTGATTGATTGGACTAAATTTTCATCTAACGATTCTTAGCTATCAACTTCACGTGAAGTCAACTGCACCTGAGTTTTTACCTTTAAGTAATTGGTTGGAATTAAGGGCACTTGCGCCTGCCACCGTGAGTGGTCAAGCTAGCATAGCAAGGACACACTTCCTGGTTGCCGGCGGTGCCCGGCGGCACGCAGTTACAACGCTGGCAGCAAGTTCCACAGGCTCTGCGGCAAAGGTTTGGACAAAATGATAACCGACACCTTGCAGCACATGCT | |||||||||
gi|224936626|gb|GO269290.1|GO269290 VBL1_9_O06_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachis ATCTAACGACTCTCAGGTATC EST sequence (targeted fragment marked with yellow): ATTAGGTTACAACCGAAGTGCGAAGAGATGCAAAGAGAAATGGGAGAATATAAACAAGTACTTCAAGAAAGTGAAGGAGAGTAACAAGCAAAGGCGTGAAGATAGCAAGACTTGTCCCTATTTTCATGAGCCTGAAGCTCTTTACAAAGACAAGATTAGCAACAACAACAACAACAACACCTTTGGAAGTTTCCAGAATAATATGGAGCCTTTGATGGTTCAGCCTGAGCAACAATGGAGGCCACCACCTGAACCCAACAAGGACAACAATAATGCATCAAATGAAGATGAAGAAGAAGAGTATGATGATGATGGTGTTGAAGAAGAAGAAGAAGAAGAAGAGGGAGATAGTGTTGGAGAAGAAGAAGAAGGATTGAACCGTTATCAGATTGTGACAAATAAAGTTTCATCAGTGGACACAGTTGAATAATAATGAGACAAGATAAGGAAGTTTCTGAATGGTGGAGGCATATAGTAACTTATTTCATATACTTTTTATTTCAAATGTGAAAACCCAAGTGTAGTCGGCTTTACGTAAAGTTGATAGTTGAGAGCCGTTAGATGATTTGACTTATTTGACTAAATTTTCATCTAATCTCAACTGTCAACTTCACGCTGCACCTGAGTTTCAACCTTATTTAAATTTCAATTTTAATTTCAATAGATATATTTTTTTCTGGGGAGGGAGGGATTATAATTAAGAATGTTACTGGGAAAAAAAATTGTCATAGAGGGATTGTTGTGCATAAATCATGCCACAAACATACACCTGCTCTAGGAAAAATATTCAATTCATTATTAATCAAATAATAATAATTATATGATTATAATTAAAAAAAAAAAAA | |||||||||
gi|225597845|gb|GO328200.1|GO328200 VBL6_25_A20_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga ATCTAACGACTCTCAGGTATC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTGTAAAACATGAAATAGTAAACTCTTTTATTAATAACATAATTGATACAACCGTACGGCAAATTAAGGTACATATATAAACAAAATAAAAAGAAACCGAAACCACCAAATTCGCACAATAATGATTATTGATTCAACAAGGATTGAACAAAAAAAACGAGTAAATAATTATTATTCTTCCATAAGTTTATTGAGAGCGTGGTGATGGAGTAATATACACATGCATGGATTTAAGTAAGGTGAAAACTTAGATACAGTCAACTTTACGTGAAATATGTGAAGTTGATAACTGAGAGTCGTTAGATAATTTGATTGATTGGACTAAATTTTCATCTAACGATTCTTAGCTATCAACTTCACGTGAAGTCAACTGCACCTGAGTTTTTACCTTTAAGTAATTGGTTGGAATTAAGGGCACTTGCGCCTGCCACCGTGAGTAGTCAAGCTAGCATAGCAAGGACACACTTCCTGGTTGCCGGCGGTGCCCGGCGGCACGCAGTTACAACGCTGGCAGCAAGTTCCACAGGCTCTGCGGCAGAGGTTTGGACGAGATGATAACCGACACCTTGCAGCACATGCTCCGCTACAGTCTATCTGCTGAAGAGAACCCTGCGTTTGTTGGTATGCCTGGTGATCGGCATGAACAAGTTGAATGATGAGAAGAGAAGCAAGAAGGGAAGCAAGTAGAAGCTTAGAGAGAGCCATTTTTATTTGAAGAAGTATGTATGTGTTGAAT | |||||||||
gi|207453472|gb|ES767517.1|ES767517 TFL_28_D02_E001.g1 USDA-Tifton Peanut Library TFL Arachis hypogaea cDNA clone TFL-028_D02 5' ATCTAACGACTCTCAGGTATC EST sequence (targeted fragment marked with yellow): GTGATTTGTTCAACAGTTTATGCAAAAGGGTGATGGAGCAAGACTGGTCTTGGAACCGGCCTGCCCTTGATTATTTGGAGCTTTACCATGCAGCACGCAAGGCTGCATCTAACAGCTAAATTCATGTGAAGTTGATAATTGAGAGTCGTTAAATGATTTGACAGGTTTTGGTCTAAAAGTAACTAGTAGTTACATATAGTGAATCCTAGTCAAAGATTGCTACTGCAAGGTGGCATCACTTTGTGTAGAAGAGCCTCAGATGGTTAATGATTTTAGTGGCATGCAATAAAATAGGTTAAGTTTTGCACTAGGCTTTTGTTTTCTTTCAAATATTTAAATACATTATTCAAATAAATATTATTCAAAGATATATTATTTAATAATGTGTTGCTATTGTATTAATTAATCAAAATATTTAATAACTTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|225600285|gb|GO328420.1|GO328420 VBL6_25_L03_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga ATCTAACGACTCTCAGGTATC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTCTTGGAGAAGAAACTAGAGAACAACTTCATTGCATACAGTAATTTACATTTTACAAGTTTAAAGGGACACGTAATCTCTTCTCTTAATCCGTACATTAATTTCTGCCAAACTCGCATATTTATTCAAAGGTGAAAATTCAGGTGTAGTAAATCTTGCGTAAAGTTAATAGTTGAGAGTTGTTAGATGAAAATTTAGTCAAATCAATCAAATCATCTAACGACTCTCAGCGATCAACTTCAGGTGAAGTCGACTGCACCTGAGTTTTCACCTTATTCAAATACTAAAGACTAACTTATATTAGCTAGCTAGGTCGGGGTTCTATCTGTATCTAATAATCTAATAATAGCTAGGTGAAAATAGAGGATAAAACATAGAGATGAGTTTCATAACGATATAGAAATATTTTTAAGAGAGATAAATATGGAATAACTTGACAAGCTATAATAGATTCCAATTTGTGCACATTTGGGCTTAAGGGCTTACGTAGTTATGTCTAGGAACTAGTCGGCAACGCAAAGGTGTCTTCATCTCGAGAGAAAGCCTGAGATTTTCGGAAAGATCCACGGGTTGTGCCGTGGGAAGCCAGACGAAATGGTGGAGAAGCCGTGCAAGCCAGATTTGGACAGTGGCTAAGCCTAACGCTCTCCCCGGGCACACCCTACGCCCTGCACCAAACGGCGCTAGCCTCAAGTCTGAGCCCATAATGGATATATCTTCCTTCAAGAATCGTTCGGGCTTGAAAGCCCAAGGCTCTTCCCATA | |||||||||
gi|149218426|gb|ES707875.1|ES707875 C20R7_8_C03_E002.g1 USDA-Tifton Peanut Library C20R7 Arachis hypogaea cDNA clone C20R7-008-1 ATCTAACGACTCTCAGGTATC EST sequence (targeted fragment marked with yellow): TTAGTTTCTCTAAGAGATGGCACTTACTGGTAAGCTTAGCTTTGAAACTGTGATCCGTTCACCTGCTGCAAAGTTCTTCAACCTCATGGCAAGGCAACTCCACCATCTTCAAAATATTTGTGAAAGAATCCATGCGGCGAAACTCCAAGTCGGTAATGACTGGGATAGTGTTGGTGGTTCAGTTAAACACTGGACTTATATCATAGATGGCAAGGTGGTTACATGTAATGAGACGATTGACATCATTGATGAGCATAAATATTTGATGATATTCAACCTCTTTGATGGAGATATCAGTAAAAACTATAAGGTTTTTAAGCTAGCTTTTCAAGTGAGTGACAATAGTAATAATAGCACTACTTCAGTTACCTGGACTGTTGAATATGAGAAGATCAATAATGATGTTGAAGCTCCATATGGCTACATGGAGTATGTTGACAAGTGCACTAAAGAAATTGATGCTTATCTTCTCAAGGCATAACGGTGATTATCAAGTTAATTGCTTGTTATGATCTAAATAATCAGTGTGAAGATACAGGTGCAGTCAACTTCATGTAAAGTTGATAAATGAGAGTCGTTAAATAAAAATTGAATCAAATTAATCAAATCATTTAACGATTCTTAACTATCAACTTCATGTGAAATTGACTGCAACTGAATTTT | |||||||||
gi|207402557|gb|ES767710.1|ES767710 TFL_39_F01_E001.g1 USDA-Tifton Peanut Library TFL Arachis hypogaea cDNA clone TFL-039_F01 5' ATCTAACGACTCTCAGGTATC EST sequence (targeted fragment marked with yellow): GTAGCGGCCTCCATTGATACTAGGTTGAGGATATACTATGAAAAGTGAAAATTCATATGTAAAGTTAATAGTTAAGAGTCGTTAGATGATAATTTAGTTAAGTCCGCTAAATTATTTATGACCTCTTAATTATCAACTTCACCTTAAATTATCTGCACCTAAATTTCTATGTTATGAAAAGCCAGTGTACAAAAATAATACATAGCTCCTCTTACTACTGTTGTAATAAATAACATGAAGAGTAGGACTACTGTATGGCACAAAACTATTGTATGAATATTAGAAAAAAAATGTTATATATTATTTTGTGGATAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|224935757|gb|GO267941.1|GO267941 VBL1_5_F21_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachis ATCTAACGACTCTCAGGTATC EST sequence (targeted fragment marked with yellow): ATTTTTTTATTTTAAATCTTCTAAAAATAAAAATAAAAAAATTATAATAAAAATTAACTATATAACTAATTAAAAATTAATTTTCTAAACTTATTCATTCATTTGAGTTATACACTAATTCATAATACAATATTGACTTGTCAATTATTTATCATTGATTAAATGTGGATTCAGTTAAATTCATTCCAATTCAATAATAAATTATAAACATTAAACTATGACATGGTATATCACAAAAAAAAAAGTAGGATTAAAAACCAACTAACTTTAAATAACTACAATTAATAATTAATAATTTTATATTTTTAAAAAATAAAATTTAAATAATTACTTATTAATGAAAATTTGAAAAATTAGGATTTTAATTAGATAAAAATTCGATTTTCTCTGAAATTGATACCTGAAAGCCGTTAGATAATTTGATTGATTTAACTAAATTTTCATCTAACGGCTATCAGATATCAATTTTCACGTGACCTGAGTTTTAACCTTTTAATTATCGCGTCCTCTCCATTTCTTTTTCACGGTACCGTGTTTTTGTTCAATTGCCCACGCAACCCTCCATCCTCAGACCGTCGGACGCTGACATCCACCCCGTCTGCATCTCCGCCGTATAAACACCCGGAATGTCGCTCCCAACGCCCTTCATAACATTACCCACGGCCTCCTCAATTTGCTGGATAGTTGCGTGCAACGTTCCATTAAAACTGCACACACTTTCTCCCGTATCCCTGCACTAAGCTCCGCCCGCAAATTCGGTTGCATT | |||||||||
gi|224931578|gb|GO264681.1|GO264681 VBL1_34_L12_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi ATCTAACGACTCTCAGGTATC EST sequence (targeted fragment marked with yellow): ACGGGGGTGTTCAGGTTGTAGTCGCCGCTTTTCCAAATGTTTTTGTATTGGTGGAAACTCGGTGCAGTTGATTTTACGTGAAATTGATAGTTGAGAGTCATTAGATGAAAATTTAGTCAAATCAATCAAATTATTTAATGACTTTCAGTTATCAACTTTACGTGAAACACTGAACTGAGTTTTTACTTTTTGTGTTAGCTTGTAAATATTTTGTTATTAGTGGTTTGTTATTAGTGGTTTATGTATTTTTCGCTGGACAACTCGTTCTATTTTTGTATACCTATGCGCCATGTAATAGAATATTCTGAATTTATGGTTTTAAAGTTTAAGTTGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|224938085|gb|GO266341.1|GO266341 VBL1_39_P01_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachi ATCTAACGACTCTCAGGTATC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTATAAAACATGAAATAGTAAACTCTTTTATTAATAACATAATTGATACAACCGTACAGCAAATTAAGGTACATATATAAACAGAATAAAAAGAAAACGAAACCACCAAATTCGCACAATAATGATTATTGATTCAACAAGGATTGAACAAAAAAAACGAGTAAATAATTATTATTCTTCCATAAGTTTATTGAGAGCGTGGTGATGGAGTAATATACACATGCATGGATTTAAGTAAGGTGAAAACTTAAATACAGTCAACTTTACGTGAAATATGTGAAATTGATAACTGAGAGTCGTTAGATAATTTGATTGATTGGACTAAATTTTCATCTAACGATTCTTAGCTATCAACTTCACGTGAAGTCAACTGCACCTGAGTTTTTACCTTTAAGTAATTGGTTGGAATTAAGGGCACTTGCGCCTGCCACCGTGAGTGGTCAAGCTAGCATAGCAAGGACACACTTCCTGGTTGCCGGCGGTGCCCGGCGGCACGCAGTTACAACGCTGGCAGCAAGTTCCACAGGCTCTGCGGCAGAGGTTTGGACGAGATGATAACCGACACCTTGCAACACATGCTCCGCTACAGTCTATCTGCTGAAGAGAACCCTGCGTTTGTTGGTATGCCTGGTGATCGGCATGAACAAGTTGAATGATGAGAAGAGAAGCAAGAAGGGAAGCAAGTAGAAGCTTAGAGAGAGCCATTTTTATTTGAAGAAGTATGTATGTGTTGAAT | |||||||||