| mature miRNA: TGAAGCTGCCAGCATGATCTT species: Arachis hypogaea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|225595480|gb|GO323850.1|GO323850 VBL6_12_N03_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTCCCATAATGCCATTTTCTAACTGGTTAAAAACCATCGCAATGTTTCATTGTGGTCCCGTGCCCAGAAAATCTCAAAAATGTAAAATTAAAATTAATAAAGAAAAAAAGACCTTAAATTTAAAGAAAATAAAAGCTACTTTGAGAAAGAAATTAAAAGCCTCCCGCCAAAACCACACAACACAGGGCATTTAAAATGATGAGGCCCTCTTCAAATGCACAACCTATTCAAACTTGGATTACGGACTATTCCTCTCCATCTTGATTTTCATCCTTGATAAGCTTGATCATGTCATCAATTCGAAGGATTGTGATGGCAGCTTCAGTGGCAAACTGAATAATTTTGACTTTGCTCATTGCAGGCTCAATGACACCAGCCTCCAAGTTGTTTCTGATCTTTCCTTCTGCGAGATCCAAACCCATGCTTGATAAATGTTTTTTATCAGCTTTGGTTTGGGCTGTATGGTGGTAGGCACGTAATTTTGCAACCAGCTCAGTAGCATCCTTCGCAGCGTTGACAGAAAGCACCTTTGGAATGATTAACAAAGATTCAGCAAACTCTGCTATGGCCAACTGCTCCCTGGATCCTAAAGTTGTGGCAAGGTATTCCAAATAAACTGATAATGCTGATTCAACAGCACCTCCACCAGCTACCGCCGTATTTGATTCAAGAGTTCTCTTGACAATTGATAATGCATC | |||||||||
gi|225613229|gb|GO341352.1|GO341352 VBL6_65_G11_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): ATCCAAACCCTAACCAAAGCAGCATAGAAACTCTCTGTATCCTTTCCCTATGACTCTCATAATCATTCATCACCGTAGAGAGTTCTTTCCAGCATCATCATCGATGATCATGCACCACTACAAGTTGAAGCTGCCAGCATGATCTTAACTTTCCCTCTCCTATGATTTGTTGGGGTGAGATCAGATCATGTGGCAGTTTCACCTAGTTGTTGGAAGCATGAATTAAGGAACCCTAGTCTTTCTTTTCCCACTCTACTCTTTTGTAAAATTACCAACGCACATGTATGTACAGGTGTCTCTATATAGTGATGATTATATATATATATATATATATATATACACACATATCCTCTTCTTGTTTTTCTCATAATCTGCAGGCTTTTCTATAAGTACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|225604057|gb|GO330824.1|GO330824 VBL6_33_P02_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTAGTTCTTACATTAAAAACGTTGGATGAGCAGCCTACCAACAAAAGTTCCCAATCCACCAACACTGCAACTTCTGTTACACATAATGTCATTTTCTAACTGGTCAAAAACCATCGCAATGTTTCATTGTGGTTCCGTGCCCAGAAAATCTCAAAAATGTAAAATTAAAATTAATAAAGGAAAAAAGACCTTAAATTTAAAGAAAATAGAAGCTACTTTGAGAAAGAAATTAAAAGCCTCCCGCCAAAACCACACAACACAGGGCATTTAAAATGATGAGGCCCTCTTCAAATGCACAACCTATTCAAACTTGGATTACGGACTATTCCTCTCCATCTTGATTTTCATCCTTGATAAGCTTGACCATGTCATCAATTCGAAGGATTGCGATGGCAGCTTCAGTGGCAAACTGAATAATTTTGACTTTGCTCATTGCAGGCTCAACGACACCAGCCTCCAAGTTGTTTCTGATCTTTCCTTCTGCGAGATCCAAACCCATGCTTGATAAATGTTTTTTA | |||||||||
gi|207407268|gb|ES717439.1|ES717439 C20R5_11_B12_E002.g1 USDA-Tifton Peanut Library C20R5 Arachis hypogaea cDNA clone C20R5-011- TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): GTCTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTATAGAAAAGCCTGCAGATCGATAGATATATGAGAAAAACAAGAAGAGGATATGTGTATATATATATATATATAATCATCACTATATAGAGACACCTGTACATACATGTGCGTTGGTAATTTTACAAAACAGTAGAGTGGGAAAAGAAAGAATAGGGTTCCTTAATTCATGCTTCCCACAACTAGGTGAAACTGCCACATGATCTGATCTCACCCCAACAAATCATAGGAGAGGGAAAGTTAAAATCATGCTGGCAGCTTCAACTTGTAGTGGTGCATGATCATCGATGATGATGCTGGAAAGAACTCTATACGGTGATGAATGATTATGAGAGTCCCAGGGAGAAGACACAAAGAGTTTCCCCAAAAAAAA | |||||||||
gi|225595421|gb|GO323131.1|GO323131 VBL6_10_K17_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga TGAAGCTGCCAGCATGATCTT EST sequence (targeted fragment marked with yellow): AGTTGAGTGTGTTTGCAAAAAACGAGGCCATGCATTCTTCTCTTTTCTTCTCTCATTCTTCTTCATCTATCCTGTTCTGTAAACTCTGAAGACCCCTACAGGTTCTTCACTTGGAAGGTCACCTATGGTGACATCTACCCCCTTGGTGTTAAACAACAGGGGATCTTGATTAACGGCCAGTTCCCGGGTCCTCATATTGACGCCGTTACTAATGACAACTTGGTTATCAGTGTCTATAACTACCTCAGAGAACCCTTCCTCATTTCATGGAATGGGTTACAACACAGAAGGAATTCATGGCAGGATGGAGTGTCTGGCACAAACTGTCCAATCCCACCTGGCAGGAACTTCACTTACAATATCCAAGTCAAAGATCAGATTGGCAGCTTCTTCTACTTCCCTTCTCTTGGAATGCACAAAGCTGCTGGAGCATTTGGCGCCATCAGAATCTGGAGCCGCCCTAAGATTCCCGTCCCTTTTCCTCCTCCTGCTGGTGACTTTTACATTCTTGCTGGAGACTGGTTCAAGCTAGATCACCATAGACTGAGACGCCTCCTGGAGAATGGGCATAACCTTCCATTCCCTGATGGGCTTCTCATCAACGGACGCGGTTGGAATGGAAACACATTCACAGTAGATCAAGGTAAGACTTACAGATTCAGAATATCAAACGTGGGGCTCACAACATCCATCAACTTCAGAATCCAAGGCCACAAGATGAAACCTGTGGAGGTCGAAGGATCTCATACTCTCCAGAACACCTACTCCTCCCTTGACATCCATCTNGGACAGTCCTATTCCGTGCTCGTCACTGCCGATCAGCCTCCCAAGGATTACTACATTGCTGTATCTACGCGTTTTACCAGACGGGTCCTCACAACTA | |||||||||