| mature miRNA: CACCAAAGGACTCTGCCCTTC species: Artemisia annua database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|283964235|gb|GW333657.1|GW333657 AAGST_UP_051_G05_31OCT2005_035 AAGST Artemisia annua cDNA, mRNA sequence CACCAAAGGACTCTGCCCTTC EST sequence (targeted fragment marked with yellow): GATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAACCTTGTTCCTACATGACCCGATCAATTCGATCGGGCACTCGCCATCTATTTTCATTGTTCAATTCTTTAACAACATGAAAAAACCATTGTTCAACTCTTTGACAACATGAAAAACCAAAAGCTCTGCCCTCCCTCTCTATCTATCCAAGGGATGGAAGGGCAGAGTCCTTTGGTGTCCCCCCCAGTCAAGAATTGGGGCCTCGCAATCACTATTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTGCGGAAAAATAGCTCGACGCCAGGATGATAAAAAACTTCACACCTCCCGTTCTTCATACTTTTTC | |||||||||
gi|159669893|gb|EY104600.1|EY104600 CAZI3816.rev CAZI Artemisia annua normalized leaf library Artemisia annua cDNA clone CAZI381 CACCAAAGGACTCTGCCCTTC EST sequence (targeted fragment marked with yellow): GAACCAGAGACTTGGAGCTAGGGGGACAACTGAGGTGTTGCAGCACCCGTTTTTCAGGGATATCAACTGGGATACACTTGCACGACAAAAGGCTTCATTTATTCCATCTTTTGAAAGTGCACTAGACACAAGCTATTTTACAAGCCGTTATACATGGAACACCTCAGAGGAACATGGTGGATATCCAGCTAGTGAATCAGAGGATTCTAGTGACAATGGTAGCATGAGTGGTAGCAGTAGCTGCCCAAGCAATCGTCATGATGAAGTGGTCGATGAATATGGAGGTCCCGATGAACTTGGATCGCCTTCTCATGTCAACAACTACTCTTTTAGTAATTTCTCCTTCAAGAATCTATCCCAGCTCGCTTCTATCAATTATGATTTGCTAACGAAAGGATTGAAAGACGAGCCAACAAAACCCAACGTATAATTACTATAAAATCCTCCCATCGATCCACCAGATGGGCAGGTTGTAAATATAAGTAACTTAAAAGGGTAAAATGGTCAAAGAGCATTATGCCGACACATATGTATGACCAGCAGGGGTGAGTCTTTTGGTGTCAACTGTAAACTAGTTAAATTAATTATACACAGAAATGCCCGCCAAATTTTGTGGTGTTTTCATTGTTTGTAAATATGATAGATTCGGTGTTATTTTTATAATGGAATATGTTTACTCTTATTTCCGGT | |||||||||