| mature miRNA: AGTACTCCCTCCGATCCTAAA species: Avena barbata database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|240375071|gb|GR367045.1|GR367045 CCOY888.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) Av AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): GAGCAGCACCGCCCCCTGCAACCCAGTCGATCGCCATTGTTCTCATCCGATGACCCACCGGCCGGAACCAGGAAGGTCGACCAGCATGCTGGACAATCTGTCTGGGCTGGTGAAGGTGAAGGTGATGAAGGGGGTGAACCTTGTCGTCTGCGACGTCCTCTCCAGCGACCCCTACGTCGTCCTCCGCATGGCCAAGCAGAAGCTTAAGACCAAAGTGGTAAGAAAGAGTACCAATCCGGAGTGGAACGAGGAGTTGACCCTCTCCGTCGAAGATCCCGTTGTTCCTATTCAAGTGAATGTATTTGACAAGGATACATTCTTCGATGATCCAATGGGCGATGCAGAGCTGGACATCGGCCCACTGCTAGAGATTGTGAATATGAGGCTTCAGGGTATGCCTGACAACGTCGTCGTGAAGAAAGTGGTGCCTAACAGGGAGAACTGCCTCGCCGAGGAGAGCTCGATATACCTATCCGAGGGGACGGTGAAGCAGAATGTGGTTCTAAGGCTAAGGAACGTGAAGAGTGGGGAGATCGAGCTCCAGCTTCAGTGGATCAACCTCTACGATTCCTATTAGGTCTTATGATACTTTGAAACTCAACTGCATTCCCTGAGTGGATGCAGAGTGCTCAAGTCAAAGATAAACCACACTCACTCCGTTTGATATGTAGTGCATATTTTTTTTAGGAATGTCAAACATAGGCATCTTTGACTTTCATAAATCAAAATATGCACTACATTATGGAATGGAGGGAGTACTATTTAGATC | |||||||||
gi|240328419|gb|GR335183.1|GR335183 CCOU2167.g1 CCOU Avena barbata leaf, pooled from different levels of rain and nitrogen (H) A AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): TGCAGTCTCTGTGGACATCGCTTGTTCAGAAGTACGAGGAGAGCAGAAGGATGAGGAAAGCAAGAAGACATGGCCGCATTTCTCAGCCATGGATAGTTTTCTATCATGCGAAGGGGAAATGGCAACCAAATAAAACACAGATCCGTAGCAGCTTAGCTCTAGTTATTTGGGGTGATCCAGGGTATTTTAGGGTAGCCTGTGAATCAGTGGCAAGATCTACAGCCCTTCCAGGAAGTAATCAGTACTACGTACATCGTTCTTTTGCAATTGCTTTAGGATGAGATGCCTGGAGTAGCAACGTGAATTAGGTTTACCAATTCACCACGGTGTATTAGCTTATGTATGATCAGCAACTAGATTTAGCAATTTATTAGTCAGTTCTCGTGGAACATCATTTTCTGTGGAACTAACAAGGCATTAACTACTAGCGTGGAGCGTTTAAAGAAGTTCAAAAAAACAAAAATCCGAACGTAAACTTCATGCTACTCCGTCCGATCCAAATTAGTTCGACTCAAATTTGTCAAGATATGGATGAATCATGTCTACGTACAATTGAATTTAGACAAACCTAAATCAACTAATTTAGGTCGGAGGGAGTATAACAAAGTATCAGTTCTGAATATGTGTCCTGTGCAAAAAAATAGAAATTGTTACATGTTGATGTGCTTTCCTATTCAAGCTGCACCTACTATATTTGTCTTAAACATGGTCATGATTTTGTGCTAAGTTTTGTATGATTACATGTTATACAATGATGTCTATGCATTTAGAATATAAGAAG | |||||||||
gi|240286648|gb|GR318070.1|GR318070 CCOO997.b1 CCOO Avena barbata leaf, grown under ambient rainfall (H) Avena barbata cDNA clon AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): CGTTCCTGGTGGCGGGCATGATCGAGTTCTTCTACGACCAGGCGCCGGAGAGCATGAAGAGCCTCGGCACGGCGCTGTCGCTCACGACGTACGGCGTCGGCAACATCTTGAGCAGCTTCCTCCTGTCGCTGGTGTCGCGGGTGACGCGGGAGAGGGGGAACCCGTGGGTGACCAACAACCTCAACGGTTCCCACCTTGATTATTACTACGCGTTCCTCACGGTGCTCGCCGTCGCCAACTTCGTGATTTTCGCCGTGCTAGCCGGCAGGTACAAGTACAAGGTGGAGTCGACGGAGACGATCGAAGTCGACATGGACGTCAAGAAGATTCAACCCGAGGCAATAGCCTGATCGAGCTGATTAATTAACTAGATACTACATAACCTCTGTATAAAACACTGCAAAACTATACAGTATAATGTATTTCCTCCGACACTTATTTAGTATCGGAGGGAGTACAGGATTACAGCTACGGACATAGCCTTTTGGTAGGAGTACAACACAGCACATACAGTATATGCAATCAGTTTGGACACGTCCATCAGAATTCACAAGTGAGGCCGAATCGACTTAGACACTGTCACAGATCTCCTCCAT | |||||||||
gi|240372377|gb|GR357409.1|GR357409 CCOY1870.b1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): CACAAGGCTAAAGTGTCTTATATTTATGAACGGAGAGAGTACTAAATAGCAAGGGCAAACGGAGGAACGTAGTCCCCTTCCTCACCTCCTCACATAACTGCATATTTCTCCAAGACAATAGAAATTCAATTCTCACAGTAGGTATTAAGATTCCCATACTATCACTCCTTTTACCAAAACAGACATATTTAGAGGTTTCAACAAAGGATTCCCACAGGTCCATCAGTTGGCCATGTGTACGCTGGCCTCAACCTGCTTGGCAGTTAACAGGGCTCGGACTTCGGTATCTTGATCGGCCATCTCGGCAGGTGCCTGACCATAGGTGTTCTCCTTCTTGGGACATGCACCAGCCTCGAGCAAAAGCTTGACGGTATCCATATGCTCCCCTCTGGCAGCATGGTGGAGTGGAGTATCGCCTTCAGCATCAGCCGTGTTGAGCATTCGAGTTACACAGCCTTCAGTATTTGCAGCAAAATTCAGAATCCACTGAACTATCTCGGTGAAGCCTCCAGCACAAGCATCATGAAGAGGAATTGCCCCTTCTTCATCTTTGCACTCCAAGCTTGCTCCACGTTCCAGCAGTAGCTGCACGCAAGGTAGATGGCCATATAAGCATGCTAGGTGAAGCACAGTATCACCATCTTCAACTGGATCATCAATGCTGCCACCACAGTTATCGAGCGCGCTGCGGATGGCGTTGACGTTGCCTGTCTGGGCAGC | |||||||||
gi|240298237|gb|GR320898.1|GR320898 CCOP2710.b1 CCOP Avena barbata leaf, grown under ambient rainfall (L) Avena barbata cDNA clo AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): GAAGAATTGCAGATGTTATTCAGCCTTCCATGGAACCTTCGGTATATGATGCTACAACCGCCATTGAAGACAAAGATGATGAGATCGTGCCACCGAAGACTAAAAGGTCCTGTTTACTACTCCCTCCGTTTTAAAATATAAGATCTTTTAGCTTTGTGAAGCAAATGTATCTAGACTACTTTTAGTATGTAGGTTCACCCAGGTTTGAAGTGAATCTACTCACTAAAACATGTGCAAATATATTTTCTTCACAAACCTAAAACATCTTATATTTTGAAACGGAGGGAGTACTTATTTTCAGTGCAATTATCCTGCATGTCTTAGTTTGACCCCACGACATATGTTTTTCTTGGCATGCTATTTATCAGTTTGGGTTGATTTTGATCGAGTTTTGATGCCTGCGGTAGCCTGTCGTAGGCGTTACACAGTTCCATGCCTGATGTGATCAAACTGTCTCCACCTACGTCTTTTGTTGTAAATGCCACCATTGTTCATGCAAAGTTTGTGTGGTTGCTACAGAGGTTGCTCACTGTGTGTTGATTCTTGTGTCTTACGACTAACGTTGCTGCCAAGTCAGGTGGGACAGTCGAAAAAACAAGGCAGTGATTGGTCTGCTATGTGTGTAGGTGCCGTTTGTATATGGTTAGCCTAATTACTTTGTGATACACGCTTTTGTGCTCTTCCATGTTGTTATCTTGCCAGCTATTTTCTATAGCATTCTTTAGATTCATAGGACTCTTTGTTTGCTGATATAGTACTTTTGCTTCTCTTAAATACAGAGTATGCTATAATGGTTTTTGTTCTCTGTTCTTTATCTGT | |||||||||
gi|240327241|gb|GR336813.1|GR336813 CCOU3133.b1 CCOU Avena barbata leaf, pooled from different levels of rain and nitrogen (H) A AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): GCCGCCCTTTTTTTTTTTTTTTGGACGGAGGGAGTACTTCCTTGAAGAAGATAGTTGTACAGAACTTAAGTAACAGATATAGCCATGAGGAGAGATAACGAGGGAAACAACAGAACATGGGAATGTGTTAATACAATGTAAACAAGGTGCCAAAGTGACGCGGGCGTAACTCCTACATCTACTTCTGCAAGGGGCGTTAACACACAGGAGCCTGCTGGCAAACAGGTTGTGCTCTCCTAGCATACACCTAAGGTAATCTAAGACAAGTGACTGTCACTCATGATGACATTATTACTTGTCCGTGGCTCCCAGCCCCCGCAACTTTGGCCGTCTTACCGCAGTCAAGGGGTTGACAATGCCCTGGCCATCCTTCCCCAGGCCAGAACCAGAACCAGGAACAAACCCCATTCTCACCATCATTTTGGATCCAAAGCCCTTTGTATGCCTCTCAAATGTGCCAACACTATTCATCTCCAGTTGCCATGGGTTACGCCTCTGTTCTGATCTTGCTTTGCTTAGCTCTGGCCTTGCATTAGACAGCGGCTCCAACCTTGCTTTGACCGCCTCCGCTTCGCTGTCAAATTCTACACCTAGCCCAAGAGATTTGGGGCGATGAATTGCTTGGATAGGCTGCACTATCCCCTGGCCATCTTTGCCAAGGCCAGTGCCCTCGATGAATCCCATCTTAGCCATCATCTTGGAACCAAATCCCTTGGTGTGCATCTCAAAAGTGCCCAGCTTGGAGAGCTGCTTTTAACAACTTTCTCCG | |||||||||
gi|240337627|gb|GR349831.1|GR349831 CCOX4468.g1 CCOX Avena barbata root, pooled from different levels of rain and nitrogen (H) A AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): ACATTTCCAGAATGATGCCCATTCTGGCATGGCATTTGTTTTCGATGATATGCAATGTGTCTTTCAGGTGTTGTTAGGGGCTGTGGTTGCAAAAGATTGGTGCTTGTGTCAATCTCAGTGCATACTACCTTGTCGGCGTTCCAGCAGCGTTATTTTTTGCCTTCTTCTACCATTTTGGCGGAATGGGATTGTGGTTCGGAATAATGTGTGGACTCATCGCGCAGATGCTTCTGCTACTGTCCATTACCCTGTGCACCAACTGGGAGAACGAAGCTTCCAAGGCAAAGGACAGAGTTTTCAGTTCTTCCCTCCCTCTAGACATGACGACATGAACATGCAAGATGCATCTTGGTAAGAACACGGTGCAAAGGAGAGACACGGAACTCACGAAGAATTTGTCGCGAAGAAAACTGCCGCGTCTCGATGTCACCAGCAGCATGGGCTTCCTTCAGAGACGTCGTCAGACCGTTCTGCTTTGGTGATTTTTTGCGATGGAGTGGCATAAGATGTACTCCCTCCGTTTCAAAATATAAGATGTTTTAGGTTTGTAAAGTAAATGAATCTAGACCCTTTTTAGTGTGTAGATTCATCCCAAAGTTGAGTAAATCTATATACTAAAACAAGTCTAGATTCATTTTCTTCACAAACCTAAAACACCTTATATTTTGAAACGGAGGGAGTATTGGCAAGCAAACGCATTGCCTTGATATGATTAGGCCATATGAGAATAATAAATTATTCTATTGACC | |||||||||
gi|240287224|gb|GR314234.1|GR314234 CCOO1733.g1 CCOO Avena barbata leaf, grown under ambient rainfall (H) Avena barbata cDNA clo AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): GACGAGGATGGGCATCGGGCTGGCGATCCAAGTGCTCACGATGGCGACGGCGTCAGTGATCGAGAGCCGGCGGCTGAGCTATGTGCGGAGCCACGGGCTGGTCGAGACCGACGCGCCGCTGCCGCTGACCATCTTCGTGCTGCTGCCGCAGTTCGTGCTGATGGGCCTGGCGGACGCGTTCCTGGTGGCGGGCATGATCGAGTTCTTCTACGACCAGGCGCCGGAGAGCATGAAGAGCCTCGGCACGGCGCTGTCGCTCACGACGTACGGCGTCGGCAACATCTTGAGCAGCTTCCTCCTGTCGCTGGTGTCGCGGGTGACGCGGGAGAGGGGGAACCCGTGGGTGACCAACAACCTCAACGGTTCCCACCTTGATTATTACTACGCGTTCCTCACGGTGCTCGCCGTCGCCAACTTCGTGATTTTCGCCGTGCTAGCCGGCAGGTACAAGTACAAGGTGGAGTCGACGGAGACGATCGAAGTCGACATGGACGTCAAGAAGATTCAACCCGAGGCAATAGCCTGATCGAGCTGATTAATTAACTAGATACTACATAACCTCTGTATAAAACACTGCAAAACTATACAGTATAATGTATTTCCTCCGATCCTAAATAAGTGTCGCGGTTTTACACTAGGCTCTAGTTCAAAACCGCGACACTTATTTAGTATCGGAGGGAGTACAGGATTACAGCTACGGACATAGCCTTTTGGTAGG | |||||||||
gi|240361149|gb|GR363226.1|GR363226 CCOY5463.b1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): AAGAAAAAAAAGGTCAAGGGTTCCCTTCCTAGGGACGGCGCAACCATCCGCTCCATCTTCTCCGCCGCCGATCCCATCTGCCTCTCCCGCAAGCCACAGACCGACCGCTATGAGTTTATTCAGCGGCGGTGAAGGGAGGAAGGCAGAGACTGAGCGGGTGGCCGGCCGGCCAAAGGGGAATCTCGCGGACTTCATCTTCAAGTTCTGCATGCGCATGAGGACGTTGATGCCTGTTGGAGCTACCTAGATGATGATGGGTGTTGGTCTTCTAGGTGCATTTATAGTCTTGTTTATAGCACCCATGGACCTTATGTTTAGTATATATGCAGCACTATCCATTTTTAGAATACTACCAAATTGTAGTGTGGAAGCATCAGGAATTTTGGGAAGGATTCTCGGGGGTAATCCAGTGAGATACTTGTGTTTGATACAATAACCGTTCCATAATAAGTGTCATCATTTTGAACTAACCTCAGTTCCATAATAAGTGTCATCATTTTGAACTAACCTCAGTTCAAAACTATGACACTTATTATGGATCGGAGGGAGTACTAAATTATGATGAAGCAGTTAGATTCCGA | |||||||||
gi|240334217|gb|GR340918.1|GR340918 CCOW2500.g1 CCOW Avena barbata leaf, pooled from different levels of rain and nitrogen (L) A AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): TTACTTTCATCACTACCAGTTGCCATTTATTCTTGCTTAGATTACCAGTATACAGTTTAGTTGTTTGTAACCAAGCTGTAATTAAGCACTGGGTGGGTGATTATACTACTCCCTCCAATCCATATTAGTTGACTTAGATTTCTCCAAATTTGGATAAACCTATATACTAAATAATGTCTAGATTCATCCAAATTTTGACAAACTTACGTCACCTAATATGGTCGGAGGGAGTACTGTAATAAATAAATAAATAAGGGAAACCATGAAGAAACAGTGGAGTAGTGAGCTAGTTGGTGTCCACCATGGCGTCGTGGAAAGCGGCGACGCGGTCGGGCGTCACGCACTGCGTGATGAGGCGCGCGCCTGGCTTGTGGACCCAGGGCTTGACGAGGATGCACGTGGCGATGTAGTCCAGGTTTGTCAGTGGCACGACGTGGGCGGGAGGACCCCACCCGTAGTCCACCTCGGCGAAGCCCAGCCGCGTCCAGTCGGACACGAGCAGCGTCCGGTAGTCGGAGGTGATCTGGTACGGGTCGAAGCCGGCCATCTCCCCGGCCGCCCACCGCGCGAACTCCGAGGGAAGGCGCTTCTTCCCCTCCTTGATGATCTTGACGACGTCGGTGATGGTGGAGGAGGCCACCTTGCCGGCCGTGGAGGACACGCGCATGATGTAGTAGCAGTTGCCGTAGAACCCCGCTCCGGCGTTGGGGAGGCGGGCGTGGAGGA | |||||||||
gi|240319249|gb|GR331418.1|GR331418 CCOT2989.g1 CCOT Avena barbata leaf, grown under high rainfall (L) Avena barbata cDNA clone AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): CAACTAGATGTATAGTGTGCTGAAACCGCTCATGCTTGCAAAGGGGACTCCATGAACGAACCGCGTGAAGGCTCAATCTGGACGGCATGATTAAACAGGGCCCTAGTTAGGATGGCATCGTTCATGAGCTCGTCAATCTGTTATGCGGTCTTGTCGCATGTAAATTACTACTATACCTATAGTCGCCTATTTCTGCATGATTCCCTTGTTGCCTTCTCCTTAGGTCATGTATCTATCCATCCATCATACATATAGTTAGTTATGTACTCGACAGACACCGTGCACACCGATCAGCATGTGTACTCCATGTGCTTCATGTCGCTAAAGTTTTTACGTACTCCTTTTATGTTTTTATGTAAGTGTCGTTGATTTAGTGCAACTTTGTAATAAATCAAAGTCACTTATATATTATGGATCCGAGGGAGTACTACTTTTGTACGTCATATGTAAT | |||||||||
gi|240374183|gb|GR365346.1|GR365346 CCOY6561.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): GATGATCGAGCCGCGTACCAGAGTTGCAGAGCAAGGACATAAGCCGCGCTGAGAAGGACGGCGTGGAGGTGCGCATCATCGCCGGCGAGGCCTTCGGGGTGCGGTCGCCGGTGTACACGCGAACGCCGACCATGTACATGGACTTCACGATGCAACCCGGCTCCCAACTCCACCAGCCCATCCCAGCAGGGTGGAACGCCTTTGTGTACATAATCGAGGGCGAGGGTTCATTCGGCAGGAAGAACGCTGCGCCAGCCACCGCGCACCACTGCCTTGTGCTCGGTACCGACGGCGACGGTCTCAGCGTGTGGAACAAGTCCGGCGCACCGCTAAGGTTTGCGCTCGCGGCGGGGCAGCCGCTGAACGAGCCCGTCGTGCAGCAGGGGCCATTTGTGATGAACACGCGCGCCGAGATCCAGCAGGCCATGGAGGACTACTACTACGGCCGCAACGGCTTCGAGAAGGCCAGACAGTGGAGCTCCGCAGCCTGAACATGATATTGTCCTCTTCATGTTCGTGCCATGATGGCGATGATGCAATTTAGTTGTACTGGCATGGAGAAATTGGGAAGGGAAATGTTGTATATGTCACATTTCTTACATGTATCGTTTTGTTGATAGAGTGTAGACTGTAGTAGTCTTTCTAAATTCCTTTGCTTTTTCATGGTAAAGATTTTCATACTCCCTCCGATCCTAAACAAGTGCCACGGTTTTGAACTATGGCGACACTTATTTAGAATCGGAGGTAGTACAAGAAATGTTTGTAATAAGAAGGCATTTTTTATTC | |||||||||
gi|240312259|gb|GR327374.1|GR327374 CCOS454.b1 CCOS Avena barbata leaf, grown under high rainfall (H) Avena barbata cDNA clone C AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): CCAGGACATGAAGATGGTGCACCTCTCGTGGGTCTCCATAGAAGGGTTCGAGATGGCGCTGAGAGCCGCATGCGGGAGGTTGAAGAAGCTAAAGATGCTCAGCAGCTTGAAGTCTATACTGTCCCCTGAACTGCTCCAACTGTTGCAGGCTTGTGGCTGCCGCATCCGCTGGGTCAACAAGCCTCTCATCTACAAGGATGCCATATGATTATGATCTGAACCCTGAGTCTACGGAGTGTTAATATGCCATCCGTTCCCTAAGTTTGTTCTGGTTGTGTAGGCATGTCAGATAAATCCACAATAACCGCCTGGTTTGTGAATGCTCATCTCTGAGATGTGATCAAGATGGTATTCCCTCCGTTTCAAAATATAAGATGTTTTAGCTTTGTAAAGCAAATGTATCTAGACTTATTTTAATATGTAGGTTTACTCAGATTTGCAGTGAATCTACACACTAAAATAAGTCTAGATACATTTTCTTCACAAACCTAAAACATCTTATATTTTGAAACGGAGGGAGTACTTGTGTTTATTGCTATCTTGGCAATCAACTATGGTGGAGTGATCTACTTGTGGTATATCGTTTGACATTTTTTTTTGTATAATTGGGGATGAAAGAAGTTGAAGAGATTTGATGTGTTTTATGTGACTCCCTTCGTTTCAAAATATA | |||||||||
gi|240287328|gb|GR314338.1|GR314338 CCOO1797.g1 CCOO Avena barbata leaf, grown under ambient rainfall (H) Avena barbata cDNA clo AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): GCGGCGAGCTACTGACTGGGGACGGCATGCTGCTGCTGCTTGGGGCCGATGGCCAGCTTCTGGAAGGTACAGTTGGGCGACGTGCAGCTGCTGGCGACCCTCGAGAATCTTGCTGGGCGACGTCCGGTGATGGATTCAGGCAAGGACGTGCACGCGCGGATTGACTCCGGCTAGCTGGGCGACTTCCGCGGATTGACTCCGGCAAGGACGCGCACGCGCGGATGGACTCCGAATAGCTGGGTGACGCCCATGGATGGACTCCGGCGAGGACGCGCATGCGCGGATGAACTCCGGCTAGCTGGGCAACACCCGCGGATGGACTCCGGCTAGCTGAGCGACGCGCGCTGGATCGATTCCGGCTAGCTGGGCGACACGCGCGGATGGATTTGGCCAAGCTGGGGGACGCCCGCATGGATAGCAGGCGACACGAATCGATCGCGCCGAGCTGCTTCGGACAAGTCCGCGGGGTATTTTTGTCCAAATCGCTATGTTCGGTCGTTGTCGGAAATATGTAAAACGTCTTATATTTAGAAACGGAGGGAGTATATACTAAAGGGAAAAATGATGCTTCAGAAATATAGCCTAAGAAAAAGATGATGCTTCATACAAGCCCTTCTTTGCAGAATCATGATTCATCAATGTAAGAAGGAACTTAATTTTTTTGAACAATAACAATAATTTACATTCGACTACGGACGGTTGTACAAAACACACACGCTCCTAGAGATGAAGAAATACTTCCCTCTTTTCAAAGAC | |||||||||
gi|240357807|gb|GR355796.1|GR355796 CCOX959.g1 CCOX Avena barbata root, pooled from different levels of rain and nitrogen (H) Av AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): GCCACTCCCAAAAGCCCATGTGGTGAGTGGATTTCCGACTTTGTTCTTTGCTGAAATTAGCTATGAGTTATAAAGACAAATCCTTCCTGTTGGCCTCTGCCTCTGCCCCTGCCCATGTGCTGCACAAATTCGGTGTCTTCACTGCGAGTTTACGGGGACTAGAATTGTGCATCCAGTTGAGATGGACTTCCATGGGGGTGAGTCGGAGTTTGAGAAGATGGCCTGCCGAAAATACCCTTATGATGCTGGCTTTGACAACATGGATATCATCAACAATAGGTATAGCTTGGCAGAGAGCATTTATGGCCGTGGGAAAGAAGATAGCCTCTATGATGACCTTGATGGGCACAGGATTGAAGAGCGTGATCTGGGTTCCATGAGTATCAAGGCCCGGATTTTGTTTTTGGCCGAGAATGTGTAAGGAGACATGCTTAAAGTTTATGTTGTCTGTGACTATGCAAGACAAGTTTAAGTGTTGTTGTCTGTGACAACGCAGGACAAGTATATGTTGTCTCAGAGGTAGGTAGGGATGCAGAAGTGGGACAACTGGGATCCCACTTTTAGACCCCAAAATCTCACTTATCCCACTTCCCCACTTAGTTTAGAGTCGGAGGGAGTATCTTCATCACCCCTAGAGATAGGATGGTTCTCTAGCAAGTGGTTAATGTACCATCAGAACATCCTATGATAGTAGCAGAATATTTGTATG | |||||||||
gi|240311552|gb|GR326707.1|GR326707 CCOS3123.g1 CCOS Avena barbata leaf, grown under high rainfall (H) Avena barbata cDNA clone AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): TGGCTGATCCGACGAGTTCGACATGACCGAGGCGTTTGGCATCACCTCGCGCCGGAAGGCCGGCTCATGTTGCGTCCCGTCCTGCGAGTGCCCGTGCCCATGCCCAAAGTCTAGGTGACGACTACACCATGGGTCCATGGCAGAACTGCACGTACGTGCGTGTACTGTACTACTCCCTCCGTTCATATTGTTTGTCGTTAAAATGGATGTATCTAGCACTAAAATAAGTCTAGATACATCCATTTTAGTGATAAGTATTATGGATTGGAGGGAGTAGTATAGTAGCCTAGGTTTGACCAAATATAAATAAGAAAATATCAATATCTATGATAGTAAATATTAAACAAATATATTATGAAAATATCTATGCTTATTACAACCATATTACTACATGACTTATATTAGGACTAGCTGCTGATTAGTAAATCAGTCTCTTTCAATCTTCCTATGTTATCATTAGCGACGATTGCTGCTCTAGTGCGTTGGTTCTTAGCACGATAATTTTACGTATGTCTACTATAACAAGCTCTACTATAAGCTTTGGCCGGCTCCGGTGTTGGAGGGACGAGGACGGCGACGCGCCTTTAGTTCGTGCTAATGTTTATAGTCATCGCTAGTCCATCAACCTATTTGTAATCTCTATATTACTTTTATGCCTCTTTGTACTACTGTTGATTATTTATTATTAATAGATCGGTGCAATTTCACGC | |||||||||
gi|240321430|gb|GR337554.1|GR337554 CCOU510.g1 CCOU Avena barbata leaf, pooled from different levels of rain and nitrogen (H) Av AGTACTCCCTCCG-ATCCTAAA EST sequence (targeted fragment marked with yellow): GGGGATGGATCCGTTGACAAGCAGCTACTTTCTTCATATGCTGAGATAGATATACGTGCAGAATTTGATGACATGCTTTATGTACGGATTCCTGGTGATGGTTGCAACTTGGACTTAAAATGCATGGCCCTTTGCACAAAGTGTGGAGACTGTAATACAAGTCTATGCAAAGGTTGACCATCCTTGTCATGTGAGGTTCACTGCTTTCAGCACTTGCTATGATGATTATGAGATTCTTCTTTTTGATGGCAAGTTATTTGGGGATGTGAAATTATTCCAGCATGTCGTCACAGTGAAGGAAAATGAAAAGTTGGATGTTCTTTTGAAAGTAGACAATTCGCTCTTTCAGTGGACCTTTCAAGATGAACATGTTGGACCTGTTTGTTGTCCTGATGACTCCATCCTTGCGTATGGCCACTTCTTTGTAAGGGTGTTCTTTGCTCCAAAGGATTACCAATGAATCCAACCTACAACATTCAGACATCCTCCAGTTGGCTCATACTTGTGAAAAGAAGTGTTGAAATTGTACCGTTTTACTCTCAAAATAAGTTATTTGGATTTGTCTAGATTCGCATGTATCTAGACATGTTTAAGTGTGAGATACATCCGAATTAGACATGTTTAAGTATGAGATACATCCGAATACAAATGCAAGTTACTTATTTTGGGATGGGGAGGGAGTACTTGTAATTGGTAGCAGTTCATTTTCTCGTTGTGTAAACCCTTGGTTTGTTTTTAAACAGCAAGAAGTATGCGGC | |||||||||
gi|240309413|gb|GR324211.1|GR324211 CCOS1633.g1 CCOS Avena barbata leaf, grown under high rainfall (H) Avena barbata cDNA clone AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): ACCTGGACATCTAAATTCGGATTTAGCCCACTTGAAGTTTCTCACAAGCAAGAAGTCAAGTCGCTCAACATGCTAGTTTTTCCTGGTACAGGTCTTCTTCAAAAGCCACTGCTGAATAAGTCTTCATCTCAGGAACACTCAGGTTCTGAAGGAGATGTTTTGACCCAAGGTTCGGAGATCATGGATTCCTTGAACAGTAGCAAAGATGCTGACACTTGCGAAGATTGATGAGCCTTGGCTACATATCATTTTGCCCTGTCAAGAGACAGCCTCCGGCATTGCATGGAAACCATGTAACTATTTTGTTTTAACTCCGCCAGCCTGCCATGCATCTGCTTCCAGAAAGTAAAGGATGTGTTTTTGAAGAGCTACCCTGGTTGTTTCGGACAGGACATGTTGACCAGCCTGTGCAGTGTGCAGAATTAGAAGTTGTTGACTCCGACCATCTAACTTTATGTGGTATCCTCAGAAGTCAGCATGTAGAGTGGGGATGATAGCTTCATTTTGTGTACTTCTTTTGGGGTTTTACTTAAAAGTCAAAGGCCAATGGTGCCGCAAATCTTAGTGGATAATAGTCGTTGTTTGTTAATAGCGTTGCATTTTCCAGTCCATTTTGCAACCAGAACCTCATGTCTGTAAGATAAAACATCTTATATTTTGAAATGGAGGGAGTACTAATAACAGCCGTGATGCTGCTGCAACTAAATCAGAATTTAGCTTCCAATCTGAAAATTTGGGAGGGTT | |||||||||
gi|240375189|gb|GR365430.1|GR365430 CCOY6606.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): AACTAACAGCTGCTGACGGCAGTGGAGAGGCGACGGCGAGGGATGGAGCTCGTGCGTGTGGCGTCCGTCGAGCACGAGCGCGCCTCCTCCGTCGATCTCGAGCGCATGTGCGTGGTCGCTCTTGAGGTCCCACGCGTGCGCGTCCCTCCGTCGACCTCCTACGCGTGCGCATCCCTCCGTCGACCTCCCGCGCGTGCGCGTCCCCTCCGTGGAGCTCCGGCGCGCCCTCTCCGTCGACCTCCGGCGCTCCCTCTCCGTCGAGATACGGTGCGCCCTCTCCGTCGAGCTTCGGCGCCCCCTCCGTGGAGCTTCGACGTGCCCCCTCCGTGGAGCTCTCGCGTGTCCCCTCCTTAAGCTCCCGTGTGGGACTTCAAGGGCAATCAGAATGGCGGCGCAGCCCTTGGAGGGCGACCAGACCGGAGGCATGGTCCAGCACGCGGCGGGGTACGGCCGCTGTCCTGCGCTGGCCGGGATGTGGGCGCCGGAGCTCGGGACGAGGCTAACTAATCGAATCAGAGGACTGTATTGTAATGATTTAAAACAGTCTAGGCTATTTAACAAAAAAGTAATTCTATAGAGGCCGTGTCGGTTATTTTGGGACGGAGGGAGTAGTTAAAAGCGAATCTTTTACTCGTCTAACCTTTTATTGCTTCGTCGGTCTGTTGTGGTGTAGCAAGTATGAAAATCCAAAGTTGGC | |||||||||
gi|240347857|gb|GR345968.1|GR345968 CCOX2368.g1 CCOX Avena barbata root, pooled from different levels of rain and nitrogen (H) A AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): GAGAGGGAGAAGACGACGGCGGATTCGATCAACTGGAACTGGGCTATCTTTGACAGAAGAAGATGCTGCTAGCTTAATTATTTCTTGTCGGGCGTTATCACTTTCTTTGTTTATTACTGCATGTTTATGAACCTTTGCGATGGAATTTGTTCGGTTGGTGTGGATGGATGATTAAACATTGTGTCTGCCATGTGAATTGTGTGGGTTTCTGTGGTTTTGTTGTGGATGTCCAATTTGATCTTTTCTGGCACATCTCCAAATGATGGATCGTCACGTTATGCATGTCGTTCTTTTAGCCGACGGTTACGCCTCTGTTTTCTGACTGAACCGTATTTTATTCGAATCTTCCATTTGACGTTCCACCAGCTGGTAATTGCAGCAGCCTGCAGGGTTCCCTGAACCTTGAGAACATGGTCTTATTTTTTATCACAGTTTGTACGTCTGCTTAAAATAGATGTCTTAGATTTGTCAAAATTTGGATGAACCTATATATTAAATAGTGTCTAGATTCATTCAAATTTTGAGAAATCTAAGACATCTATTTTAGGACGGAGAGAGTACTATATATACTTGCCAACTTAATAGTCCTCGTTTAATCTTATACTCCAGTTTTTCTCACAATTCCAGCCAGGGCTTTGACCTCTAAACATGAAATATAGTGCATATTAGATTTGTTCCAAGTCAAACTCTGTAAATGTCGATCAGATGCACTGTATCTTGCATAGAGAATATGTGCTCTTG | |||||||||
gi|240290387|gb|GR313284.1|GR313284 CCOO1169.b1 CCOO Avena barbata leaf, grown under ambient rainfall (H) Avena barbata cDNA clo AGTACTCCCTCCGATCCTAAA EST sequence (targeted fragment marked with yellow): AAAAATGCTAATTTGGATCGGAGGGAGTAGTTATATCTTTTCACCTATACTCCATTTAAACATTCTAGTGAACTGTGAGCAGAAAAAAATGGAATCTGAAATTTCGGAACTCCTGGTTGCTGCAGAGAGGACCATGGGCCTCTACTTCTCCTATGATATCAACGTAACACTTAATTCACAGAAGCTATGTGATATAGACGATGAGTTCAAATCACGTCCTCTTTGGAAACAGGCAGAACCGAGATTTCTATGGAATAGCTACTTGCTGGAACCTCTAATTGAGAACAAACTGGACCAGTACTTGTTGCCAGTCATTCAAGGCAGTTTTCAGAATATCCATGCAGAAGTCGGGTCAGAGAAGGTAGATGTGACCCTCATTGCACGTAGGTGCACAGGTAGAATAGGTACTCGTATGTGGAGGCGAGGAGCTGATCCAGAGGGTTATGCCGCAAACTTTGTTGAATCAGAGCAGATAGTGCAATCAAAAGGGTATACAGCATCCTATGTACAAGTACGAGGTTCTATGCCATTCTTGTGGGAGCAGATTGTTGATTTGACCTACAAACCTAGCTTCGACGTTGTTAGACAAGAGGAAGCGCCACGTGTACTTGAGAGGCACTTTAATGACTTAAAAAAGAAATATGGAGCTGTCTTGGCTGTTGATCTTGTCAACACAAATGGTGGTGAAGGGCGACTCCGTGAAAGATATGCAAAATCCATTGAACCTATTCTCAATGATGATTTAAGATATGTGCATTTTGACTTCCATCGTATTTGCGGTCATATCCATTTCGAGCGCTTTCTCAGCTCTACGAGCAAAT | |||||||||