| mature miRNA: GCGAGCTTCTCGAAAATGTCG species: Avena barbata database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|240314422|gb|GR331922.1|GR331922 CCOT3292.b1 CCOT Avena barbata leaf, grown under high rainfall (L) Avena barbata cDNA clone GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): GTTCTCCCACCTTCCCCCTGCGAATCCCCACCACAGCCTCTCCTCTCCTCTCCCCCGAGAATCACCCATGGCCCCCAAGGCAGAGAAGAAGCCGGCGGCGAAGAAACCCGTGGAGGAGGAGCCCGCGGCCGAGAAGGTCGAGAAGACCCCGGCGGGGAAGAAGCCCAAGGCGGAGAAGCGGCTGCCGGCGGGGAAGACCGCCGCCAAGGAGGGCGGCGAGGGGAAGAAGGGCAAGAAGAAGGCGAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTCCTCAAGCAGGTGCACCCGGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTGGCCGGCGAGTCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCTGGCGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCAAGGCCGTCACCAAGTTCACGTCCTCTTAGGTTGCCTCGCAACTGCTAGTAGTTTAGGTTGCTTTCTCTGTCTGTTGGGATGATGTAAGATCAACTGCTATCTTGAATAGAAATGGTACTGCGTTTCCACCTCCATATGATCTGTCATGCGCTTGTTCTTAACATCTTCTAGATTGAATGTGTTTTGACAATGTCGAGAAATTGGATTGTGAATCTGATA | |||||||||
gi|240361878|gb|GR357799.1|GR357799 CCOY2094.b1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): AACCTCCCAGCTCCACACCACCACCAGCTCCTCCGAGAAGCACCCATGGCGCCCAAGGCAGAGAAGAAACCGGCGGAGAAGAAGCCCGTGGAGGAGGAGACCGCGGCCAAGAAGACCCCCGCCGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACCGCCTCCAAGGAGGGCGGCGAGAAGAAGGGCAGGAAGAAGGGCAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTCCTCAAGCAGGTCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCAGGAACTCCTTCATCAACGACATCTTCGAGAAGCTGGCCGGCGAGTCCGCCAAGCTCGCGAGGTACAACAAGAAGCCCACCATTACCTCCAGGGAGATCCAGACCTCGGTGCGTCTTGTGCTTCCAGGGGAGCTCGCCAAGCATGCCGTGTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGGCTGTTCCTTGTCTTCTTGGACGGTCTCCTCTGTGATGTCTCCTGGTTCCTTGTTTGTTTCGAGCTTGTATGGTGTATTAGTT | |||||||||
gi|240361879|gb|GR357800.1|GR357800 CCOY2094.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): AACCTCCCAGCTCCACACCACCACCAGCTCCTCCGAGAAGCACCCATGGCGCCCAAGGCAGAGAAGAAACCGGCGGAGAAGAAGCCCGTGGAGGAGGAGACCGCGGCCAAGAAGACCCCCGCCGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGCAAGACCGCCTCCAAGGAGGGCGGCGAGAAGAAGGGCAGGAAGAAGGGCAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTCCTCAAGCAGGTCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTGGCCGGCGAGTCCGCCAAGCTCGCGAGGTACAACAAGAAGCCCACCATTACCTCCAGGGAGATCCAGACCTCGGTGCGTCTTGTGCTTCCAGGGGAGCTCGCCAAGCATGCCGTGTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGGCTGTTCCTTGTCTTCTTGGACGGTCTCCTCTGTGATGTCTCCTGGTTCCTTGTTTGTTTCGAGCTTGTATGGTGTATTAGTT | |||||||||
gi|240375811|gb|GR366052.1|GR366052 CCOY6923.b1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): CTCTCCTCTCTCACCCGACCCCACCGCCGTTCCCCTCTCCTCCAGAAGCGCATCGTCGATGGCACCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGTGGAGGAGGAGCCCGCGGCGGAGAAGGCCCCTGCGGCGAAGAAGCCCAAGGCGGAGAAGCGGCTGCCGGTGGCGAAGACCGCCGTCAAGGAGGGCGGCGAGGGGAAGAAGGGCAAGAAGAAGGCGAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTCCTCAAGCAGGTGCACCCGGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGTCCGCCAAGCTGGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTACGCCTCGTCCTCCCAGGCGAGCTCGCCAAGCACGCTGTCTCCGAGGGCACCAAGGCCGTCACAAAGTTCACTTCCTCTTAGGTTCTGGTAGTTTAGGTTGCTCTCTCTGTTGGATTCTGTAAGATGAACTGCTATCTCGAATAGAATTGGTGTCGAGTTTCCACCTCCATGTGATCTGCCGA | |||||||||
gi|240364448|gb|GR358398.1|GR358398 CCOY2436.b1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): CATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGTCCGCCAAGCTGGCGAGGTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCTGTCACCAAGTTCACTTCCTCGTAGACTGTTCTTGTCTGGTTTCACTGTCAGTTTCAAGTTTCAGATGCACGCTGTAGTTAGCCTTTTAGTGTTTGCTCTGAATTTGGGCTATGAAGAAATAGTAATGTTTCTGTGTCACTCTGAATCGAGCCTGTAACTCTCATGGATCATTTTTTGTGCGA | |||||||||
gi|240367470|gb|GR362572.1|GR362572 CCOY5116.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): CGACGGAGAAGGCCGAGAAGGCCCCGGCCGGGAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCGGGAAAGACCGCCTCCAAGGAGGGCGGCGAGAAGAAGGGCAGGAAGAAGGGCAAGAAGAGCGTGGAGACCTACAAGATCTACATCTTCAAGGTCCTCAAGCAGGTCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTTGCCGGTGAGGCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACTATCACCTCCAGGGAGATCCAGACCTCCGTCCGTCTCGTCCTCCCTGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCTCCTCTTAGATCTCGTTGCTCGTATCTAGTGGTAGAAGTTGTTTGCTGCTGTTGACTAGTGGTCGTCGTCCCTGATTATCTGCAAGTAGTGGTAGTAGTGCTAATCCTGGATGGGTGTTGCTGAATTTGCCAATGTTTCGTTGGCTAGTTGGTTGTAAGATCTGAATTATGAATGATGATGCTTTCG | |||||||||
gi|240377392|gb|GR367235.1|GR367235 CCOY995.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) Av GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): GCTTTCTCAAGCCGAGACCACCTCAATCCCCCCAATCCCTCCGATGGCGCCCAAGGCCGAGAAGAAGCCGGCGGAGAAGAAGCCCGCGGCCGAGGTCGAGAAGGCGGAGAAGACCCCCGCCGGGAAGAAGCCCAAGGCCGAGAAGCGGCTCCCGGCCTCCAAGTCCGCCTCCAAGGAGGGCGGCGACAAGAAGGCGAGGAAGAAGAACAAGAAGTCCGTGTAGACCTACAAGATCTACATCTTCAAGGTCCTGAAGCAGGTGCACCCGGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTGGCCGGGGAGGCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCAGCAACTAAGCTAGCAGGAAGATGTATCTGATACTAGGTTTCCCTTCGCCGTAGTCGTGTCCGTGTTCTCCTGTTAGCACCTGGTTGCCGTCGGTTCTGTTGTAGCGTTAGGTAGGTTGCTCGCCTGCTTTGTAAATCGTGCAATGTTGTAATGGACGGCTTTGATTTCAAGTAATGGATGTGGAGTTGTATTTC | |||||||||
gi|240374441|gb|GR366468.1|GR366468 CCOY7137.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): CAATCCCCCACCGATCCCGCACCTTCCAGCGAAAACCTCACCTCCACCTCCACCTCCCTCCCCGGAGAAACCAGCAGCCCCCATGGCCCCCAAGGCGGAGAAGAAGCCGGCGGCGAAGAAGCCCGTGGAGGAGGAGCCCGCGGCGGAGAAGACCCCGGCCGGGAAGAAGCCCAAGGCCGAGAAGCGCCTGCCGGCGAGCAAGACCTCGGCCAAGGAGGGCGGCGAGGGCAAGAAGGGGAAGAAGAAGGCCAAGAAGTCCGTGGAGACCTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGTCCGCCAAGCTGGCGAGGTATAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTGCTCCCAGGGGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCAAGGCCGTCACCAAGTTCACTTCCTCTTAGGATGCTCTGTTTGGTCTGTAGTTAGATGCCTCTGCGTGTGTTCTGGTTGTAAGAAATTTGCTGCCGGTGTGGGCAGCAGTGTTGTTTCAATCTGAAGAAATGTTATCTGTCTGCTCCT | |||||||||
gi|240344847|gb|GR349512.1|GR349512 CCOX4310.b1 CCOX Avena barbata root, pooled from different levels of rain and nitrogen (H) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): CTGGTCGCCGCCATCCTCTGCTTCTGCCTCGGCACCTCGCTGCTGCTAGCGGTGGCGGATGCCAAGGTGCGCCACTACGACTGGGACATCTCGTACCAGAAGAAGTCCCCCGACTGCTTCGAGAAGCTCGCCGTCACCGTCAACGGCGAGGCTCCCGGCCCGACCATCCACGCGACGCAGGGTGACACCGTCGTCGTCACCGTCCACAACAAGCTCGAGACCGAGAACACCGCCATCCACTGGCACGGCATCCGCCAGATTGACACGCCATGGGCTGACGGCGTCGCCGGCGTGACGCAGTGCCCCATCCTACCTGGCGAGACATTCACCTACAGATTCGTCGTCGACAGGGCCGGCACGTACCTGTATCATGCGCACTACGGCATGCAGCGCGTGGCGGGGCTCAACGGCATGATCGTCGTCAGCGTGCCGGAGGGCGTCACGGAGCCCTTCGCCTACGACGAGGAGCACACCGTCCTCCTCGAGGACTGGTGGCACAAGAGCGTCTACGACCAGGCCACGGGCCTCTCCGCCAAACCCTTCGTCTTCGTCGGTGAGCCCCAGTCTCTCCTGATCAACGGCCGAGGGATATTCAACTGCTCCAAGCCGGTTCCTGCTACCGGAACGTGCAACACCTCCAGCCCGGACTGCGGATTGAGGAGTCTATTCACCGTCGTGCCTGGGAAGACATACCTCCTCCGCATCGGCAGCCTCACGTCGCTCTCGTCGCTCAGCTTCGAGATCGAGGGCCACTCGATGACGGTG | |||||||||
gi|240374128|gb|GR365291.1|GR365291 CCOY6532.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): GGCACTCCCCTCACTTCCTTCTCCAACCCGAGACCACCTCAATCCCCCCCATCCCTCCGATGGCGCCCAAGGCCGAGAAGAAGCCGGCGGAGAAGAAGCCCGCGGCCGAGGTCGAGAAGGCGGAGAAGACCCCCGCCGGGAAGAAGCCCAAGGCCGAGAAGCGGCTCCCGGCCTCCAAGTCCGCCTCCAAGGAGGGCGGCGACAAGAAGGCGAGGAAGAAGAACAAGAAGTCCGTGGAGACCTACAAGATCTACATCTTCAAGGTGCTGAAGCAGGTGCACCCGGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTGGCCGGGGAGGCCGCCAAGCTCGCACGCTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGTGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCCGTCACCAAGTTCACCAGCAACTAAGCTAGCAGGAAGATGTATCTGATCCTAGGTTTCCCTTCGCCGTAGTCGTGTCCGTGTTCTCCTGTTAGCACCTGGTTGCCGTCGGTTCTGTTGTAGCGTTAGGTAGGTTGCTCGCCTGCTTTGTAAATCGTGCAATGTTGTAATGGACGGCTTTGATTTCAAGT | |||||||||
gi|240364412|gb|GR358362.1|GR358362 CCOY2413.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): GGCTCCACACCTCTCCTCCGAGAATCACCCATGGCCCCCAAGGCAGAGAAGAAGCCGGCGGAGAAGAAGCCCGTCGAGGAGGAGCCCGCGACGGAGAAGGCCAAGAAGACCCCCGCCGGCAAGAAGCCCAAGGCCGAGAAGCGTCTGCCGGCCGGCAAGACCGCCTCCAAGGAGGGCGGCGAGAAGAAGGGCAAGAAGAAGTCCAAGAAGAGCGTCGAGACGTACAAGATCTACATCTTCAAGGTCCTCAAGCAGGTCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTTGCCGGCGAGTCCGCCAAGCTCGCGAGGTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACCTCGGTGCGTCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCAAGGCTGTCACCAAGTTCACTTCCTCTTAAGCTGTTCTGATGTCATGGGAGAAGCCCCTGTCTCGCTTGCTTTGATGTTGGTTCCAAGTTCCCACTGTACCCGGTAGCTAGATGTTTGATGTGTCACGACTCGTGACTGATCTTGTCTGAACTGTGTTGGTCGATGTAACAGCAGTGTTATTTTAGTCTGAAGAAATAGTAATATTGGTGCTTCGATGTCC | |||||||||
gi|240364449|gb|GR358399.1|GR358399 CCOY2436.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): CGTCGAAGCAGCAGCCGCACCGATGGCCCCAAGGCGGAGAAGAAGCCGGCAGAAAAGAAGCCGGTGGAGGAGGATCCGCGGCGGAGAAGGCCGAGAAGAGCCCTGCCGGCAAGAAGCCCAAGGCCGAGAAGCGGATGCCGGCGTCCAAGGAGGGCGGCGGCGAGGGGAAGAAGGGCAAGAAGAAGGCGAAGAAGAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGGTGCACCCCGACGTCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGTCCGCCAAGCTGGCGAGGTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCTGTCACCAAGTTCACTTCCTCGTAGACTGTTCTTGTCTGGTTTCACTGTCAGTTTCAAGTTTCAGATGCACGCTGTAGTTAGCCTTTTAGTGTTTGCTCTGAATTTGGGCTATGAAGAAATAGTAATGTTTCTGTGTCACTCTGAATCGAGCCTGTAACTCTCATGGATCATTTTTTGTGCGACTGTATTGTGGTTTGTGGGTTGAATTGTGTTAGGCTGCTTTTCAGCCATGTCGCGCGGTTAGATTCATTTTGATCCGTGTCGTTTGATCTCATCCATGTCGCCTGAATTTTGTTCAGAAATGTTGATCTGCTTTTGC | |||||||||
gi|240375788|gb|GR366029.1|GR366029 CCOY6911.b1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): CCAGCAAGAACACTCCACCATCCCATCAATCCTCCTCGTCGCCGGCGCAGCCACCGTCCCCCCTCGATCCGTCCGTGATGGCGCCCAAGGCCGAGAAGAAGCCCGCGGAGAAGAAGCCGGTGGAGGCCGAGAAGGCGGAGAAGGCCCCGGCCAAGGGGGAGAAGAAGCCCAAGGCGGAGAAGCGGCTGCCGGCGGCCAAGGAGGGCGGCGGCGACAAGAAGTCCAAGAAGAAGGCGAAGAAGAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTCAAGCAGGTGCACCCGGACATCGGCATTTCCTCCAAAGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTTGAGAAGCTCGCCGGCGAGTCCGCCAAGCTCGCCAGGTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACTTCGGTCCGCCTCGTCCTCCCCGGCGAGCTAGCCAAGCACGCCGTCTCTGAGGGCACCAAGGCAGTAACCAAGTTCACATCCTCTTAGGCTCGTCGTGTCTCTCTCTTGGTTGTCGTGGGTCGAGGCTTCTAGCTTGTAATTGTTTCTGGTTGTGATGAACAATGAATGGAATGGAATGGAATCGCTACTATTTGATTGC | |||||||||
gi|240375812|gb|GR366053.1|GR366053 CCOY6923.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): GATTTACATTTTCAAGGTCCTCAAGCAGGTGCACCCGGACATCGGCATTTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATTTTCGAGAAGCTCGCCGGGGAGTCCGCCAAGCTGGCCCGCTACAACAAGAAGCCCCCCATCCCCTCCCGGGAGATCCAGACCTCCGTACGCCTTGTCCTCCCAGGGGAGCTCCCCAAGCACGCTGTTTCCGAGGGCCCCAAGGCCGTCACAAAGTTCACTTCCTTTTAGGTTTTGGTAGTTTAGGTTGCTCTTTTTGTTGGATTTTGTAAGAGGAACTGTTATCTCGAAAAAAATTGGGGTGGGGTTTCCCCCCCCATGTGATCTGCC | |||||||||
gi|240374253|gb|GR366280.1|GR366280 CCOY7042.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): CGCCGCCGGGCAACGCGCCTCTTCCCGTGGACGAAGTGGTCACTGAGCTCGACGTGGTGTCCAGCTTCAGTGAGATCGTGCCCGACACCGTCGTTTTCGATGATTTCGAGAAGTTTGCACCGACGGCGGCCACAGTGAGCTCCTCACTGCTCCTAGGGATCGTGGGGCTCCCTGATACCAAGTTTAAGAGTGCCATAGATACCGCGTTGGTAGATGGCGAATGTAACACAATGGAGAAGCCTGGGGACCGGATGTCCTGTTACCTTACCAAGGCCCTGGGGAATGTTGGAGCTGAGCTGTCTCATCAAGTTCCTGGAAAGGTGTCAACGGAGATAGATGCCCGGTTAGCTTACGATACCCAAGGAATCATTCAGAGGGTGCATGAACTGTTGCAGATATACAATGAACATGATGTCCTGTCAGAACGTTTGTTATTCAAAATTCCTGCTACATGGCAAGGTATAGAGGCCTCAAGGTTGCTTGAATCTGAAGGAACTCAAACACATTTAACATTCGTTTACAGTTTTGCACAAGCAGCAGCTGCGGCACAAGCTGGGGCATCCGTTGTGCAGATATTCGTGGGGCGTATTCGGGATTGGGCAAGAAATCACACTGGTGACCCAGAGATAGATGAAGCTTTAAAGAAGGGAGAAGATGCTGGGCTTGCCTTGGTGAAGAAAGCATATGCTTATATCCACAGGAATGGCTAC | |||||||||
gi|240358808|gb|GR356721.1|GR356721 CCOY1479.b1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): CACATCTCCTCCCACCTTCCAGCACCCAAACCCACCCTCTCTCCTTCTCAATCATCCATGGCCCCCAAGGCGGAGAAGAAGCCGGCGGCGGCGAAGAAGCCCGCGGAGGAGGAGCCCGCGGCGGAGAAGACCCCCGCCGGGAAGAAGCCCAAGGCCGAGAAGCGTCTGCCGGCGAGCAAGACCTCGACCAAGGAGGGCGGCGAGGGGAAGAAGGGCAAGAAGAAGGCCAAGAAGAGCGTCGAGACCTACAAGATCTACATCTTCAAGGTGCTGAAGCAGGTGCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGATATTTTTGAGAAGCTCGCCGGCGAGTCCGCCAAGCTCGCGCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCTGTTCGTCTTGTTCTCCCCGGGGAGCTCGCCAAGCACGCCGTGTCAGAGGGCACCAAGGCTGTCACCAAGTTCACCTCGTCGTAGAGATCTGGATTGTTGCCGCACTGTAGTTATGTGATGTCTGTCTCGGTGTGTGTTCTTAGTCTGGTGAAACGCAGAATTAATGTGCTGATTTGAGTTCCTGAT | |||||||||
gi|240375816|gb|GR366057.1|GR366057 CCOY6925.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): TCTTCTTCTTGTTGCTGCCGGAGAAAGAGCTTTAAGGAGGCGGCGGCGGAGACCAAGAACGAGGAGAAGATCCAGCTGTGTTCTGTTCTTGCGTAGGTAGGTAGGCGGCATGGATGTGGAGATCCAGCAGCCGCAGGAGGTGGGCAAATCCAGGATCGTGAAGGTGGACAAGGACGAGGCGTGGGAGCTCTTCACCAGCCAGGCCAGCAACGAAGGCCGCACGGTGGTTGCGCACTTCGGGGCGTCGTGGTGCGTGACGTCCCTGTCCATGAACTACAAGTTCGAGGAGCTCGCGCAGACCCACCCCGAGATGCTCTTCCTCTTCGTCGATGTCGATGATGTCCAGGGCGTGTCCTCCAAGCTGGGAGTGAAGGCCATGCCCACCTTCTTCCTCGTCAAGGGCAAGGAGGTGCTGAAGAAGATCGTCGGCGCGAACCCGGACGAGCTCACGAAGATGGTGGACTCCGACTCTGACGCACCAGCTCTTCCTGACATAGTCATCGAGTAACCGAAGCTTCTCCGAGTGTGTGCTGCTTGCTTGCTTGGTTCCGGACTTCCGGTACAGTGTGTGACTCTGAATCTGATCTCTGATGCGTGTCTTGGGTAGGATTGTGGTTGCTTGGTGCTGCAGCTTTGACTTACTTTCTGAATTGTTATTACATGGGTACTTGTGTTTTTGCTCTCGGGTCGTCAATAAAAAAAGTGTGAGCACGGTGTGTG | |||||||||
gi|240286618|gb|GR318040.1|GR318040 CCOO979.g1 CCOO Avena barbata leaf, grown under ambient rainfall (H) Avena barbata cDNA clon GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): AAGAGCAAGAGCCTTGTTGCGTACCATGAAGTTGGGCATGCAGTTTGCGAAACTTTGACGCCTGGCCATGACCCCGTCCAGAAGGTTACATTGGTTCCAAGAGGTCAAGCTCGTGGTCTCACCTGGTTCATTCCTATGGATGACCCGACGCTCATCTCTAGGCAGCAACTTTTTGCCAGAATCGTTGGTGGCCTTGGTGGTAGAGCTGCTGAGGAGATCATTTTTGGAGAGCCTGAGGTGACCACGGGAGCTGCCGGTGACTTGCAGCAGATCACTGGTTTAGCCAAGCAGATGGTGGTCACTTTCGGCATGTCAGAAATCGGCCCATGGTTTTTGATGGATGGGGCGCAGAGGGGGGATGTCATCATGAGAATGATGGCAAGGAACTCCATGTTTGAGAAGCTCGCACTGGAAATCGATTCGGCCATTAAGCAGTTGTCAGACCAGGCCTACGAGATTGTTTTGCAACAGATCAGGGAGAACCGTGGGGCGATGGACAAAATCGGGGAGGTGCTCCTCGAGAAGGAGACGCTGAGCGGTGATGAGTTCCGGGCGATTTTTTCCGATTTTGAACC | |||||||||
gi|240368848|gb|GR358627.1|GR358627 CCOY2565.b1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): CCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATATTCGAGAAGCTCGCCGGCGAGTCCGCCAAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTCCGCCTCGTCCTCCCAGGCGAGCTCGCCAAGCATGCCGTCTCCGAGGGCACCAAGGCTGTCACCAAGTTCACGTCTTCTTAGGTTGCCTCGCAACTGCTAGTAGTTTAGGATGCTTTCTCTGTCTGTTGGGATGATGTAAGATCAACTGCTATCTTTGAATAGAAATGGTACCGCGTTTCCCACCTCC | |||||||||
gi|240325124|gb|GR338196.1|GR338196 CCOU902.g1 CCOU Avena barbata leaf, pooled from different levels of rain and nitrogen (H) Av GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): CAACTCTTTGCCAGAATCGTTGGTGGCCTTTGGTGGTAGAGCTGCTGAGGAGATCATCTTTGGAGAGCCTGAGGTGACCACTGGAGCTGCCGGTGACTTGCAGCAGATCACTGGCTTAGCCAAGCAGATGGTGGTCACATTCGGCATGTCAGATATCGGCCCATGGTCTTTGATGGATGGGGCGCAGAGCGGGGATGTCATCATGAGAATGATGGCAAGGAACTCCATGTTTGAGAAGCTCGCACTGGACATCGATTCGGCCATTAAGCAGTTGTCAGACCAGGCCTACGAGATTGCTTTGCAACAGATCAGGGAGAACCGTGTGGCGATGGACAAAATCGTGGAGGTGCTCCTCGAGAAGGAGACGCTGAGCGGTGATGAGTTCCGGGCGATTTTTTCCGAGTTCACGGAGATCCCTGTTGAGAACCAGATTCCTCCAACCCCCCAGGCTGCCGTCCCAGTTTAAGTTTGCCTAGCTTTTATAGGGTTGGAAATTTGTTGTTGTAAGATGTTCATATTTTCGATTCTTGGGGTAAACTAATTTTATGTCATGCTGCCGGATTTTTTCGGTGTACGACATGTCGACATGTAACTTACTCGTGGTTAATTAAAAAAAAGTAATTACCTGG | |||||||||
gi|240374678|gb|GR366705.1|GR366705 CCOY7260.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): GAGCAATTCCCCACACTTCTTCTTCCTCCAGCGAAACACCACCACAGCTCCTCTCTCCGAGAATCACCATGGCCCCCAAGGCAGAGAAGAAGCCGGCGGAGAAGAAGCCCGTGGAGGAGGAGACCGCGGCCAAGAAGACCCCCGCCGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCGGCCGGCAAGACCGCCTCCAAGGAGGGCGGCGAGGGGAAGAAGGGCAAGAAGAAGGCGAAGAAGAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAGGTCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTTGCCGGTGAGTCGGCAAAGCTGGCACGGTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACCTCTGTTCGTCTCGTGCTTCCAGGGGAGCTCGCCAAGCATGCTGTGTCCGAGGGCACCAAGGCCGTCACCAAGTTCACTTCCTCTTAGGCTGTTCTGATGCCACGGGAGGTGTCCCTGTCTTTCTTGCTTTGATGTTGGTTCCAAGTTCCCACTGTACCCTGTAGCTAGATGTTCGATTGTGTCACGACTTGTGACTGCCAGACTTTATGATCCTGCCTGAAGTGTGTTGGTCGCTGTAACAGTACTAGCATGTGAGTCTGAAGAAAATAGTAATGTTGCTGCGTTGATGTTCC | |||||||||
gi|240375789|gb|GR366030.1|GR366030 CCOY6911.g1 CCOY Avena barbata root, pooled from different levels of rain and nitrogen (L) A GCGAGCTTCTCGAAAATGTCG EST sequence (targeted fragment marked with yellow): GGCGCCCAAGGCCGAGAAGAAGCCCGCGGAGAAAGAAGCCGGTGGAGGCCGAGAAGGCGGAGAAGGCCCCGGCCAAGGGGGAGAAGAAGCCCAAGGCGGAGAAGCGGCTCCCGGCGGCCAAGGAGGGCGGCGGCGACAAGAAGTCCAAGAAGAAGGCGAAGAAGAGCGTGGAGACGTACAAGATTTACATTTTCAAGGTGCTCAAGCAGGTGCACCCGGAAATGGGCATTTCCTCCAAAGCCATGTCCTTCATGAACTCCTTCATAAACGACATTTTTGAGAAGCTCGCCGGGGAGTCCGCCAAGCTCCCCAGGTACAACAAGAAGCCCCCCATCCCCTCCAGGGAGATCCAGACCTCGGTCCGCCTTGTCCTCCCCGGGGAGTTAGCCAAGCACGCCGTTTTTGAGGGCACCAAGGCAGTAACCAAGTTCACATCCTTTTAGGCTGGTGGTGTCCCTCCCTTGGTTGTGGGGGGTGGAGGCTTTTAGCTTGTAATTGTTTCTGGTTGTGATGAACAATGAAGGGAAGGGAAGGGAATCGCTCCAATTGATTGC | |||||||||