| mature miRNA: TACTCCCTCAGTCCCAAAATA species: Avena sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|226979727|gb|GO586716.1|GO586716 03-ASAEN2NG-UP-011_E05_28MAR2007_039 ASAEN2NG Avena sativa cDNA, mRNA sequence TACTCCCTCAGTCCCAAAATA EST sequence (targeted fragment marked with yellow): GCCGGCAATGCCGAAGAAGAGGAGGAGGAGGACTAGCTAGCTGCTGGTTTCTGTTTCTTCAGGATATCCTGAACTAGTCTTTTGCTTGATTACTAGAACCCAGATCGATGGTGTGCTATCATCGTTTGTTTTCTTCGGTGGTACTCCCTCGGTCCCGAAATAGATATCGCAAGTTTGTCAAAATTTAGATACTAAATATTTTCTAGATTCATCCGAATTTTGACAGATCTAAGACATCTATTTCGAGACTGGGGGAGTACTTGGTTTAGCCTTTTATTTGTCGAATTTCTTAGACCTTAATAATAAGGAGATGTACTACGTAGTATCTATTTGGCACTTTACT | |||||||||
gi|226983514|gb|GO587960.1|GO587960 03-ASAEN2NG-UP-027_F12_28MAR2007_086 ASAEN2NG Avena sativa cDNA, mRNA sequence TACTCCCTCAGTCCCAAAATA EST sequence (targeted fragment marked with yellow): AGGCATCAACAGAAGAAAAGGAGAGGAGTGCAGCCATGCTGCGGGAGAACCAGAAGCTCAAGAAGCAGCTGGAAAAGATGAAGAACAAGCACGAAATGGAGATGGAGACGATGAAGCACTACCTTGCGGAGAGCAAGCTGCCGGAGTCGGCACTGGAGGGGTTCTACCGTGAAGAGAGCAACGAGGGCGCGCTAGAGTACAGCCATGCTCTGTCCACCTGCGACGACGATCAGTCTTGGCGGTCTGCTTTTACAACTGAATTCCGAAGCTGATGACTGCTTGAGTTACTCGTCAACTGAGACAACTATTCCCTAAGATATTTTAGCTTTATGAAACAAATATATTTAGACTTCTTTTAGTATTCTAGGTTTAGTCAGGTTCAAAGTGTATCTACAAAATAAAAGAAGTCTAAAAATATTTTTTTCATAAACCTAAAACATCTTATATTTTAGAACTGAGGGAGTAGGAAACAAGCATTGATTTGATCTTAATTTTTTATTTTTTACATAATTTATGTGCCTGTGTTGGGACAAAAGTTGCGTTTATAATGTTGTATGACATTTTTTGTATCCATCCGTACTACAGTCTTGTGAGTGTTAGTACAATGAATAATTTTTACTATCC | |||||||||