| mature miRNA: CACCAAAGGCCTCCGCCCTTC species: Beta vulgaris database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|116581259|gb|EG552630.1|EG552630 MM04K21_XP Sugar Beet germination cDNA library Beta vulgaris cDNA clone MM04_K21 5', mRNA se CACCAAAGGCCTCCGCCCTTC EST sequence (targeted fragment marked with yellow): CNNCNCGAAAGGAAAAAAAAATTAATTTTGGATGTAAAAATACCCCAAAGAACATTTTGTTGGCCCCTTCCCCCTGGAAATCTTCTGTATACACCTTGACCGAATTCTACAAGAATTACAATTCCGTTTGGCCAGATGAATTCCAAAATATCCCCTGGAAAGAAGCCTGGAGTTTCAAAAACCTCCCGAAAAAAAGCATGGGCTTTCCCAAACTCTCCCCAATTTGCTTGAAAAAGGAAAGGGTGATTTTAATATTTTGGAACCCCTTTTTTGAAAACAAAAATGGTTTTGCCAAAAAATTCCAAACCCCTTTTTTTTCCATGTGAAAACAAGCGCGCCCTTTTTTGGGGGGGAAAAAACTTTTTTTTCCCCATTCCAAAAAAAAAAAAAACCCGTTCTTTCCCCCTTCCCCGAATTTCTTTTTTAAAAAACCACAAAAAGATTTTTTTCCGGCCAAATTTCCGCCCGGGGGAACACATTTTAAAGGCCCCCCCCGGGGAACCCCTCTTTTCTTTTGGGGGGATTATAANGGGAAAAAGGGAAAATTTCTCCGAAAAATCCCCCCCCCCCCCCCACCCCCGGAAAATGTGGGGGGGCAAAAAAAAAAAAAATGGGGGCCCCCCCCCCAAAAAAAAGTGGCCTTATAAACACCGGGGGGGGGTTTGTGTCCCCCCCCAACACTCGGGGGGGGGGGGGTTTTTGGTGTCTTCCCCGGGGGAGAAATGGGGAGACAAAAAGGGGTTTTTTCCCCCCCAAACATAGGGAAAAAAAACCCTCCCCCCCCCTCCCCCCCCCAAATATAAAAAAAANATNTTTCCCCACCCCCCCTCAACAATCCTCTGGTATTTTGCGCCCCTTTTTTTTTTTTTTTCTCATTTTTTTTTTTTTTTAANTTTTTTTTTATTTTCCTCCCCCCCCCTTCTTATATATTATTATANTATTATTTTTTTATTAAATGAAATCAATATTCTTTTGCTTCTGCCCACGTCATAAAAATCCCCCCGCCCTTTTTCTTCTATTTTTTTTTTTTTTATATCTTTAAAATTTTCCTCTTTCCCCCCCCTCTTCTTCTCCAAAAAACCCCCCCTCTTCTTTNTAACAACCACCCCCCCCCTTTCTATTTTTTTTTTATTAAATTCATCCCCCCACCCCTCTCCCTCTTTTTTTGCNNNNCACCCCCCCCTCCTCCCCTCTGTTTTGNTGCTTTCTTTTTNTTTATCATAACTACCACCCTCTAATATACTACCTTC | |||||||||