| mature miRNA: GCGTATGAGGAGCCATGCATA species: Brassica oleracea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|308683627|gb|DK540095.1|DK540095 DK540095 full-length kale cDNA library (flowers) Brassica oleracea var. acephala cDNA clone GCGTATGAGGAGCCATGCATA EST sequence (targeted fragment marked with yellow): TGTGTAGACAGTTGTGCGATTGATAACACAATTTTTAATATAAGGATTTACAAGAACAAAAAAAGAACAAATTATAAGGGGAGCTCACAAGTTATATACATATACAAACAAATTTATAAGATCGATATGATTGAAACGATACAAAAGAATCTGAACCGTACGGGAATGTAATAATCAGCTATCGAAATAATTAACCATTTCCTATAGAAAAAAACAAGGAGCTACGTCGATGTGAACGCAGGAGTCCTCGTAAGAAGTGCTGTGACGACATGACATAAAATTGTACTGGAAAAATACGAAACGAAAGACAAGAACGGAATCAGAGCTCAACAAAATATCTATCAGTAAAATCTTTTGGAGACCACAGGAAGAAGCATATGTATATGGTTTAGTGAAGTACCTTCTAATCTTCCACACATGATGGATAACAAGCTCAACACAATTTAACGGGTACCATAACATAATTAGAATGGTGTAGGAACTTTAACTGGTACCATAAAATAGCTAGAAAACGTATGTAAATGTATATGAAAATATGCATGGCTCCTCATACGCCATTCACGGAGGTCATCAATGGTCGATGAGCTTAGAGGATGGCATACAGGGAGCCAGGCATACACATCTTATACAACTACACATATGCATCTATGTATGTGGCCTGATGCATATAAATGCTATTATGTATTGAAACTAATTTCCCAAACCTGGATCTATTTACGGTAAGTTATCTAGATCTACACCTGGACATGCATAAACAATAAGTAATAAATATGAAGGAATAGAAGCAATCTAAAGCATAGATCGAGA | |||||||||
gi|308664791|gb|DK530214.1|DK530214 DK530214 full-length kale cDNA library (capsules) Brassica oleracea var. acephala cDNA clone GCGTATGAGGAGCCATGCATA EST sequence (targeted fragment marked with yellow): GTATGAAATCATAATTTAGACAATGAATACTCTGATACAAAGCATTGATCTTCTCACTCTATATCTCGAATCACCATTAATAAATCAATGATGAAACTCTGGAGCCACTTGCCTCTTGTCAAAATTTACACAAAAGATATAATACAAGCTCTGGTCATTATAACCTTGTCTCTTCAAGAACTGGTACTGCTCTTTCTCCTCCTGACAGCTTTCTTCACAGTAACCTTATCATCACTCTTCTCTTCATCATCTGTACTATTCACAGCTTTTACAGAACTCTGTTGGCTCCTCATACGCAGTATCTCTCCCTTTGCAGAGCCCAAGTCCTCCTCGAGCTTCTTCACTTTCTTTTCTAGCGCTTCCCTCTCTTTCCCTAGACTTATCACGAGGTTATGTGCGTCTTCCACGTTTTCCTTAGCTTCTTTTGATGCCTTCTTCCCCGCTTCTAGTGATCTTTGAAGCACTTCTTTCTCGTCCTCCAAACTCGAGACATGGCTATTCACCTTCTCAAGCTCCTTTGACAGTGTCGATGTGTTTCTGTTCATCTCATCTAAGGACTTGACTGCTTCTTCGAGTTCTGCTTCAAGGGACTTCCTCGCCTCCTTCTCCATCAACATCTGCTTCTCCATTGCTTTCACCTCTTTGTCCAATGCCAAAACCTTCCTCTTCTCCTCTTCCAGTTCCTTCTTAGTGGTTTCGGCTTTCTTGTAAACCTCCACTAGTTCTTTCTGGAGGCTCTGGGTTCTTGACAGAAGA | |||||||||