| mature miRNA: CGGACCCGGATACGGATCCGA species: Brassica oleracea var. alboglabra database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|75973044|gb|AM057906.1|AM057906 AM057906 AAFC_WHRI_BoE01a Brassica oleracea var. alboglabra cDNA clone AAFC_WHRI_BoE01a006A19 CGGACCCGGATACGGATCCGA EST sequence (targeted fragment marked with yellow): TTCACTTGTAGAGAAGAAGAGAAAAAAAAAAAGAGTAAAACAATGGCGAATCCTTGGTGGGTAGAGAGTCCAGTGACGTCATCAGCTCCTTCTTTGCACCACAGGAGCAATAACCCTACCATGACCCTGTCGGATCCAAGATTGGACCATGACTTCGCCAACAACAGTGGAAGCCCTAACACTCAGACTCAGAACAGCCAAGAGGAACAGACTAGCCGCGACGAGCTACCCGCGGTGGAGCCCGGATCCGGATCCGGGTCTACGGGTCGACGTCCGAGAGGCAGACCTCCCGGTTCCAAGAACAAGCCCAAGAACCCAGTGGTCGTCACCAAAGAAAGCCCTAACTCGCTGCAAAGCCATGTCCTGGAGATAGCCGCGGGTGCTGACGTGGCGGAAAGCCTAAACGCGTTCGCTCGTAGACGCGGGAGAGGCGTCTCTGTTCTGAGCGGGAGCGGTTTGGTCACTAATGTTACTCTGCGTCAGCCTAGTGCGTCTGGAGGAGTTGTGTCTCTTCGTGGTCAGTTTGAGATCTTGTCTATGTGCGGTGCGTTTCTTCCGACTTCCGGTTCTCCCGCTACAGCCGCTGGTTTGACCATTTACTTAGCTGGAGCTCAGGGTCAAGTCGTGGGGGGTGGAGTAGCTGGACCGCTTATTGCATCTGGACCGGTTA | |||||||||
gi|122031421|gb|EH420286.1|EH420286 OL4376F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabr CGGACCCGGATACGGATCCGA EST sequence (targeted fragment marked with yellow): CTGAAATCTCCTCCTATTACATAAGTCTAATTATATTTAACAAACCGATTTATAGATTAAAAAAGGAGTATTAGGAGAAATAGATTACCAAAATGACATAAACATAGAAACTGTTTGTCTACGTGATGACTCGAGTCACCTTGAAATCAGTTTTAGCAGCTTCATATTAATTTACCATAATACCCCCCTCTCTGTTTTCTCCCATCCTTCAGTTTTTCTCCACTCTGTTCCTAGAAAGATCGGTCCACGGGTTACCACCACCTTCGTCACCCGCTTCACTCCTCTTTAGTCCCATACCCGGATCCCAGCCCGACCCGTCTAGGATGATCCCACCAAGACCCAACTGCATATTCGACGCCAAAAGCGAGCTAAAACTCCCACCACCACCCATCTCCATACCTTTCACGTCTTGGTCTCCGATCGGTAACCCGTACAGCATCCGGATCGGATCCGTATCCGGGTCCGGGTGTTTGGTCTTCTTCTTGTGTGTGTTGGGAGGAGAAGACGCAGAGGTTGATCGTTTAGCGTTCTTGCGAGAACCGCCGCCGACGGGAACGTTGCGGAGAGCCCCGCCTTTGGTCCAGTAACGACGGCAGCTTTTGCAAAAGTGACGGGGCTGTGACAGGTTGTAGTTGTTGTAGTAACAGAATTTTGTGTTCGGTGAGTCACATCGAGGACACTTTAGCTGTTCTTGCTCTGGAAACTGCTGTGG | |||||||||