| mature miRNA: AGAATCTTGATGATGCTGCAT species: Brassica rapa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|150899445|gb|ES929909.1|ES929909 36RDBRG_UP_085_B12_20JAN2006_094 Brassica rapa 36RDBRG Brassica rapa cDNA 5', mRNA sequence AGAATCTTGATGATGCTGCAT EST sequence (targeted fragment marked with yellow): GATCCTTCAGCTCATCAGCAAAAGAGAGAAGAAGAAGAAGGTTAGATTAGATTCTCCACAAACATGACGACCACCTACGACTTCGAAGACACTCCGTCAAACTACGACGACGTCCAGCGTCAGGGCGGCCAAGACGCCGTCTACGACCCGAACTTCGTGCCGGACTCCGTCAAGTCCTTCGTGGTTCACATGTACAGACACATCAGGGAGAAGAACGTCTACGAGATCCACCAGATGTGCGAGACCTCGTTCCAGACCTTGTCTGAGCGGCTCTTCAAGGACACCCCTTGGCCTTCCGTCGAAGCGATCGCTCCTTATGTCGACAACGATCACGTCTTCTGTCTTTTGTACCGTGAGATGTGGTTCCGTCACTTGTACGCGAGGCTGTCGCCGACTCTGAAGCAGAGGATTGATTCCTATGATAACTACTGCAGCCTCTTTCAGGTGGTGTTGCACGGTGTAGTGAACATGCAGCTACCAAACCAGTGGCTGTGGGACATGGTGGATGAGTTTGTCTACCAGTTCCAAAGCTTCTGTCAGTACAGAGCCAAGATGAAGAACAAGACAGAGCAGGAGATTGCATTGCTCAAACAGAACGACAAGGCGTGGAATGTGTACGGCGTGCTCAACTTCTTGCAAGCCCTTGTGGAGAAGTCCACCATCATCCAGATTCTTTGAGCAGAGAAGGAAGACTCGAGCAGTTC | |||||||||