| mature miRNA: CAAGTCAGAGAAGTTTGATGA species: Brassica rapa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|150128680|gb|EE529652.1|EE529652 39RDBRT_UP_063_E10_30NOV2005_072 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence CAAGTCAGAGAAGTTTGATGA EST sequence (targeted fragment marked with yellow): GAGATTCGCCAATTCTCATTCATTCGATCTCTCTGACTTGGCGCGCTCTCTCCTCTCTGTTTGTGTCTGTCTGTGCGATAATGGCCATGGCAGAGCTTACAACTCCCAAAACGACGTCGCCGTTTCTCGACTCGTCGTCTCAGCTTCGCCTCTCTTCCAAGTTGCATCTTTCAAACCAGTTTCGCCATCTTCTTCTTCCACCTCTCCACGCTACTCCCAGCTCCAAAATCTCATGCTCTGTTTCTCAGAATAATCAAGCGCCTGTAGCGGTTCAAGATAATGGGTCGGTGAAGACGAAGAAAGAGTGTTATGGAGTGTTCTGCTTCACCTATGACCTTAAAGCTGAAGAGGAGACGAAGTCATGGAAGAAGATGATCAGTATTGCAGTTTCAGGTGCTGCAGGAATGATATCTAACCACCTTCTCTTCAAACTTGCTTCAGGTTCAGTGTTTGGACCAGACCAACCCATTGCTTTGAAACTTCTTGGATCAGAGAGATCAATCCAAGCCCTAGAAGGCGTTGCAATGGAACTCGAGGATTCCTTGTTCCCTTTGTTGAGAGAAGTTGATATAGGAACAGATCCATACGAAGTGTTCCAAGACGTGGAGTGGGCTCTTCTGATTGGTGCAAAGCCTCGGAGGCCCTGGAATGGAACGTGCTGCATTGTTGGACATCAATGGACAGATATTTGCTGAGCAGGGCAAAGCTCTTAACGCAGTTGCTTCTCCT | |||||||||